BLASTX nr result

ID: Coptis24_contig00023480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023480
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thali...    72   6e-11
gb|AAD29773.1|AF074021_5 putative transposon protein [Arabidopsi...    69   4e-10
ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217...    67   2e-09
gb|AAD28679.1| En/Spm-like transposon protein [Arabidopsis thali...    65   4e-09
gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putati...    65   6e-09

>gb|AAC97238.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 781

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/66 (48%), Positives = 47/66 (71%)
 Frame = +2

Query: 2   LVAKGRWESDDLFKPVHGVPLGDNASKVWVEEVVNAEPRLWRENSELQTVGDAKGTAIAW 181
           +VA+GRW ++D  + VH VPLGDN  KVWV+ V  ++ ++WR + E++ + DA GTAIAW
Sbjct: 714 VVAEGRWATNDPKQKVHFVPLGDNVVKVWVDIVKVSDVKVWRPSDEVEIMEDALGTAIAW 773

Query: 182 PSKYII 199
           P   +I
Sbjct: 774 PEDKVI 779


>gb|AAD29773.1|AF074021_5 putative transposon protein [Arabidopsis thaliana]
           gi|7267217|emb|CAB80824.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 346

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/67 (50%), Positives = 42/67 (62%)
 Frame = +2

Query: 5   VAKGRWESDDLFKPVHGVPLGDNASKVWVEEVVNAEPRLWRENSELQTVGDAKGTAIAWP 184
           VA GR  S D  + VH VPLG NASKVWVE       R+WR NSE+  + DA GT + WP
Sbjct: 280 VAVGRVSSIDPAEKVHHVPLGSNASKVWVEVSKVDGARVWRPNSEVTFIADAVGTTVGWP 339

Query: 185 SKYIIFI 205
           +  I+F+
Sbjct: 340 NDKIVFV 346


>ref|XP_004134263.1| PREDICTED: uncharacterized protein LOC101217008 [Cucumis sativus]
          Length = 1163

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = +2

Query: 2    LVAKGRWESDDLFKPVHGVPLGDNASKVWVEEVVNAEPRLWRENSELQTVGDAKGTAIAW 181
            +VA+GRW S+D    VH VPLG  A KVWV+    ++  LWR NSE+  + DA G+A+AW
Sbjct: 1092 VVAEGRWSSNDPKVIVHHVPLGPQAVKVWVDLPKRSDAFLWRPNSEMHYIKDAVGSAVAW 1151

Query: 182  PSKYII 199
            P   ++
Sbjct: 1152 PLDKVV 1157


>gb|AAD28679.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 352

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/68 (47%), Positives = 45/68 (66%)
 Frame = +2

Query: 2   LVAKGRWESDDLFKPVHGVPLGDNASKVWVEEVVNAEPRLWRENSELQTVGDAKGTAIAW 181
           +VA+GR  S +    VH VPLG +ASKVWV+ +     ++WR NSE+  VGDA GT +AW
Sbjct: 285 IVAEGRICSTNPEDKVHFVPLGPDASKVWVQVLKIGSAKVWRPNSEVHFVGDALGTTVAW 344

Query: 182 PSKYIIFI 205
           P+  + F+
Sbjct: 345 PNDRLRFM 352


>gb|AAG60150.1|AC074360_15 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 1431

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +2

Query: 2    LVAKGRWESDDLFKPVHGVPLGDNASKVWVEEVVNAEPRLWRENSELQTVGDAKGTAIAW 181
            ++A+ RW ++D  + VH VPL DNA KVWV+ V  ++  +WR + E++ + DA GTAIAW
Sbjct: 1364 VMAERRWATNDPKQKVHFVPLDDNAVKVWVDIVKVSDVTVWRPSDEVEIMEDALGTAIAW 1423

Query: 182  PSKYII 199
            P   +I
Sbjct: 1424 PEDKVI 1429


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