BLASTX nr result

ID: Coptis24_contig00023476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023476
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316916.1| white-brown-complex ABC transporter family [...    97   1e-18
ref|NP_194472.3| ABC transporter G family member 9 [Arabidopsis ...    94   1e-17
emb|CAB43874.1| putative protei [Arabidopsis thaliana] gi|726959...    94   1e-17
emb|CBI20349.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9...    92   4e-17

>ref|XP_002316916.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222859981|gb|EEE97528.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 619

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/60 (73%), Positives = 54/60 (90%)
 Frame = -2

Query: 181 LKERRYESFSGLKICQVTVVAFLAGLLWFQSKVSNIQDQIGLFFFYTSFWCFFPLFQAIF 2
           +KER+++SFSGLKI QV VVAFL+GLLW+QS VS++QDQ+GL FFY+ FW FFPLFQAIF
Sbjct: 362 VKERKHDSFSGLKIAQVLVVAFLSGLLWWQSDVSHLQDQMGLLFFYSGFWGFFPLFQAIF 421


>ref|NP_194472.3| ABC transporter G family member 9 [Arabidopsis thaliana]
           gi|378405146|sp|Q9SZR9.2|AB9G_ARATH RecName: Full=ABC
           transporter G family member 9; Short=ABC transporter
           ABCG.9; Short=AtABCG9; AltName: Full=Probable
           white-brown complex homolog protein 9; Short=AtWBC9
           gi|332659938|gb|AEE85338.1| ABC transporter G family
           member 9 [Arabidopsis thaliana]
          Length = 638

 Score = 93.6 bits (231), Expect(2) = 1e-17
 Identities = 39/60 (65%), Positives = 52/60 (86%)
 Frame = -2

Query: 181 LKERRYESFSGLKICQVTVVAFLAGLLWFQSKVSNIQDQIGLFFFYTSFWCFFPLFQAIF 2
           LK+RR++SFSG+K+ Q+ +V+FL GLLW+Q+K+S +QDQIGL FF +SFW FFPLFQ IF
Sbjct: 379 LKQRRHDSFSGMKVAQIFIVSFLCGLLWWQTKISRLQDQIGLLFFISSFWAFFPLFQQIF 438



 Score = 21.2 bits (43), Expect(2) = 1e-17
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 206 TWCQQFCV 183
           TW QQFCV
Sbjct: 366 TWWQQFCV 373


>emb|CAB43874.1| putative protei [Arabidopsis thaliana] gi|7269596|emb|CAB81392.1|
           putative protein [Arabidopsis thaliana]
          Length = 635

 Score = 93.6 bits (231), Expect(2) = 1e-17
 Identities = 39/60 (65%), Positives = 52/60 (86%)
 Frame = -2

Query: 181 LKERRYESFSGLKICQVTVVAFLAGLLWFQSKVSNIQDQIGLFFFYTSFWCFFPLFQAIF 2
           LK+RR++SFSG+K+ Q+ +V+FL GLLW+Q+K+S +QDQIGL FF +SFW FFPLFQ IF
Sbjct: 376 LKQRRHDSFSGMKVAQIFIVSFLCGLLWWQTKISRLQDQIGLLFFISSFWAFFPLFQQIF 435



 Score = 21.2 bits (43), Expect(2) = 1e-17
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 206 TWCQQFCV 183
           TW QQFCV
Sbjct: 363 TWWQQFCV 370


>emb|CBI20349.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = -2

Query: 181 LKERRYESFSGLKICQVTVVAFLAGLLWFQSKVSNIQDQIGLFFFYTSFWCFFPLFQAIF 2
           +KERR+ESFSGLKI QV VV FL+GLLW+QS  S++QDQIGL FF + FW FFPLFQAIF
Sbjct: 365 VKERRHESFSGLKIGQVLVVGFLSGLLWWQSDSSHLQDQIGLLFFCSGFWGFFPLFQAIF 424


>ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9-like [Vitis vinifera]
          Length = 623

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/60 (73%), Positives = 51/60 (85%)
 Frame = -2

Query: 181 LKERRYESFSGLKICQVTVVAFLAGLLWFQSKVSNIQDQIGLFFFYTSFWCFFPLFQAIF 2
           +KERR+ESFSGLKI QV VV FL+GLLW+QS  S++QDQIGL FF + FW FFPLFQAIF
Sbjct: 365 VKERRHESFSGLKIGQVLVVGFLSGLLWWQSDSSHLQDQIGLLFFCSGFWGFFPLFQAIF 424


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