BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023474
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20053.3| unnamed protein product [Vitis vinifera]              504   e-140
ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containi...   504   e-140
emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]   503   e-140
ref|XP_002519129.1| pentatricopeptide repeat-containing protein,...   491   e-136
ref|XP_002330266.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136

>emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  504 bits (1297), Expect = e-140
 Identities = 245/340 (72%), Positives = 292/340 (85%)
 Frame = +1

Query: 4    KGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVI 183
            KG++ DSYT+GS+IS +CK GRLEEA  LF+KM +  LVP+AVTYNTLID YCNKG+L  
Sbjct: 291  KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 350

Query: 184  AFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILIN 363
            AF YRDEMVKKGI P++ TYN+L+HALFMEG+M E D ++KE+ +K ++PD ITYNILIN
Sbjct: 351  AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 410

Query: 364  GYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSP 543
            GYS+ GNA+KAF+LH EMLSKGI PT  TYTSLIYVL +R RM EAD+LFE+I  +G+SP
Sbjct: 411  GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP 470

Query: 544  DMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLL 723
            D+IMFN ++DGHC N N+ERAFMLLKEMD K V PDEVT+NTLMQG CR GKVE+AR LL
Sbjct: 471  DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 530

Query: 724  NEMKERGIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKN 903
            +EMK RGIKPDHISYNTLISGY R+GDIKDAF VRDEML+ GFNPTLLTYNALI+ LCKN
Sbjct: 531  DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 590

Query: 904  KDGNHAEELLKEMLSKGITPDDSTYISLVEGMGKDENLVE 1023
            ++G+ AEELLKEM++KGI+PDDSTY+SL+EGMG  + LVE
Sbjct: 591  QEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  218 bits (556), Expect = 2e-54
 Identities = 115/325 (35%), Positives = 188/325 (57%)
 Frame = +1

Query: 22   SYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVIAFKYRD 201
            S  F  ++   C+L R +EA   F  M +  +VP   T N ++  +     + +A+    
Sbjct: 157  SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 202  EMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILINGYSKEG 381
            EM +  I  T+ T+N++++ L  EGK+ +    +  +E     P+ ++YN +I+GYS  G
Sbjct: 217  EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 276

Query: 382  NARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFN 561
            N   A  + + M  KGI P   TY SLI  + K  R+ EA  LF+++   GL P+ + +N
Sbjct: 277  NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 336

Query: 562  TLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKER 741
            TLIDG+C   ++ERAF    EM +K + P   TYN L+  L   G++ +A  ++ EM+++
Sbjct: 337  TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 396

Query: 742  GIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHA 921
            GI PD I+YN LI+GYSR G+ K AF + +EML+KG  PT +TY +LI  L +      A
Sbjct: 397  GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456

Query: 922  EELLKEMLSKGITPDDSTYISLVEG 996
            ++L +++L +G++PD   + ++V+G
Sbjct: 457  DDLFEKILDQGVSPDVIMFNAMVDG 481



 Score =  168 bits (426), Expect = 2e-39
 Identities = 88/260 (33%), Positives = 148/260 (56%)
 Frame = +1

Query: 235  LTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILINGYSKEGNARKAFELHEE 414
            + +++L+       +  E  +    +++K +VP   T N +++ + K      A+ L+ E
Sbjct: 158  IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 415  MLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFNTLIDGHCINKN 594
            M    I+ TV T+  ++ VL K  ++ +A E    ++  G  P+++ +NT+I G+    N
Sbjct: 218  MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 595  MERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKERGIKPDHISYNT 774
            +E A  +L  M  K + PD  TY +L+ G+C+ G++E+A GL ++M E G+ P+ ++YNT
Sbjct: 278  IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 775  LISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKEMLSKG 954
            LI GY  KGD++ AFS RDEM+ KG  P++ TYN L+  L        A++++KEM  KG
Sbjct: 338  LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 955  ITPDDSTYISLVEGMGKDEN 1014
            I PD  TY  L+ G  +  N
Sbjct: 398  IIPDAITYNILINGYSRCGN 417



 Score =  166 bits (420), Expect = 1e-38
 Identities = 91/262 (34%), Positives = 149/262 (56%)
 Frame = +1

Query: 1    QKGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLV 180
            +KG+     T+  ++ AL   GR+ EA  + ++M +  ++P A+TYN LI+ Y   GN  
Sbjct: 360  KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 419

Query: 181  IAFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILI 360
             AF   +EM+ KGI PT +TY  LI+ L    +M E D L +++  + + PD I +N ++
Sbjct: 420  KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479

Query: 361  NGYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLS 540
            +G+   GN  +AF L +EM  K + P   T+ +L+    +  ++ EA  L +++K +G+ 
Sbjct: 480  DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 539

Query: 541  PDMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGL 720
            PD I +NTLI G+    +++ AF +  EM      P  +TYN L++ LC+  + + A  L
Sbjct: 540  PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 599

Query: 721  LNEMKERGIKPDHISYNTLISG 786
            L EM  +GI PD  +Y +LI G
Sbjct: 600  LKEMVNKGISPDDSTYLSLIEG 621


>ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
            mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  504 bits (1297), Expect = e-140
 Identities = 245/340 (72%), Positives = 292/340 (85%)
 Frame = +1

Query: 4    KGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVI 183
            KG++ DSYT+GS+IS +CK GRLEEA  LF+KM +  LVP+AVTYNTLID YCNKG+L  
Sbjct: 313  KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 372

Query: 184  AFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILIN 363
            AF YRDEMVKKGI P++ TYN+L+HALFMEG+M E D ++KE+ +K ++PD ITYNILIN
Sbjct: 373  AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 432

Query: 364  GYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSP 543
            GYS+ GNA+KAF+LH EMLSKGI PT  TYTSLIYVL +R RM EAD+LFE+I  +G+SP
Sbjct: 433  GYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP 492

Query: 544  DMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLL 723
            D+IMFN ++DGHC N N+ERAFMLLKEMD K V PDEVT+NTLMQG CR GKVE+AR LL
Sbjct: 493  DVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 552

Query: 724  NEMKERGIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKN 903
            +EMK RGIKPDHISYNTLISGY R+GDIKDAF VRDEML+ GFNPTLLTYNALI+ LCKN
Sbjct: 553  DEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKN 612

Query: 904  KDGNHAEELLKEMLSKGITPDDSTYISLVEGMGKDENLVE 1023
            ++G+ AEELLKEM++KGI+PDDSTY+SL+EGMG  + LVE
Sbjct: 613  QEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  218 bits (556), Expect = 2e-54
 Identities = 115/325 (35%), Positives = 188/325 (57%)
 Frame = +1

Query: 22   SYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVIAFKYRD 201
            S  F  ++   C+L R +EA   F  M +  +VP   T N ++  +     + +A+    
Sbjct: 179  SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 202  EMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILINGYSKEG 381
            EM +  I  T+ T+N++++ L  EGK+ +    +  +E     P+ ++YN +I+GYS  G
Sbjct: 239  EMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 298

Query: 382  NARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFN 561
            N   A  + + M  KGI P   TY SLI  + K  R+ EA  LF+++   GL P+ + +N
Sbjct: 299  NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 358

Query: 562  TLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKER 741
            TLIDG+C   ++ERAF    EM +K + P   TYN L+  L   G++ +A  ++ EM+++
Sbjct: 359  TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 418

Query: 742  GIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHA 921
            GI PD I+YN LI+GYSR G+ K AF + +EML+KG  PT +TY +LI  L +      A
Sbjct: 419  GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478

Query: 922  EELLKEMLSKGITPDDSTYISLVEG 996
            ++L +++L +G++PD   + ++V+G
Sbjct: 479  DDLFEKILDQGVSPDVIMFNAMVDG 503



 Score =  168 bits (426), Expect = 2e-39
 Identities = 88/260 (33%), Positives = 148/260 (56%)
 Frame = +1

Query: 235  LTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILINGYSKEGNARKAFELHEE 414
            + +++L+       +  E  +    +++K +VP   T N +++ + K      A+ L+ E
Sbjct: 180  IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 415  MLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFNTLIDGHCINKN 594
            M    I+ TV T+  ++ VL K  ++ +A E    ++  G  P+++ +NT+I G+    N
Sbjct: 240  MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 595  MERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKERGIKPDHISYNT 774
            +E A  +L  M  K + PD  TY +L+ G+C+ G++E+A GL ++M E G+ P+ ++YNT
Sbjct: 300  IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 775  LISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKEMLSKG 954
            LI GY  KGD++ AFS RDEM+ KG  P++ TYN L+  L        A++++KEM  KG
Sbjct: 360  LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 955  ITPDDSTYISLVEGMGKDEN 1014
            I PD  TY  L+ G  +  N
Sbjct: 420  IIPDAITYNILINGYSRCGN 439



 Score =  166 bits (420), Expect = 1e-38
 Identities = 91/262 (34%), Positives = 149/262 (56%)
 Frame = +1

Query: 1    QKGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLV 180
            +KG+     T+  ++ AL   GR+ EA  + ++M +  ++P A+TYN LI+ Y   GN  
Sbjct: 382  KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 441

Query: 181  IAFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILI 360
             AF   +EM+ KGI PT +TY  LI+ L    +M E D L +++  + + PD I +N ++
Sbjct: 442  KAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501

Query: 361  NGYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLS 540
            +G+   GN  +AF L +EM  K + P   T+ +L+    +  ++ EA  L +++K +G+ 
Sbjct: 502  DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIK 561

Query: 541  PDMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGL 720
            PD I +NTLI G+    +++ AF +  EM      P  +TYN L++ LC+  + + A  L
Sbjct: 562  PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 621

Query: 721  LNEMKERGIKPDHISYNTLISG 786
            L EM  +GI PD  +Y +LI G
Sbjct: 622  LKEMVNKGISPDDSTYLSLIEG 643


>emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  503 bits (1294), Expect = e-140
 Identities = 245/340 (72%), Positives = 292/340 (85%)
 Frame = +1

Query: 4    KGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVI 183
            KG++ DSYT+GS+IS +CK GRLEEA  LF+KM +  LVP+AVTYNTLID YCNKG+L  
Sbjct: 237  KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 296

Query: 184  AFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILIN 363
            AF YRDEMVKKGI P++ TYN+L+HALFMEG+M E D ++KE+ +K ++PD ITYNILIN
Sbjct: 297  AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 356

Query: 364  GYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSP 543
            GYS+ GNA++AF+LH EMLSKGI PT  TYTSLIYVL +R RM EAD+LFE+I  +G+SP
Sbjct: 357  GYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP 416

Query: 544  DMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLL 723
            D+IMFN +IDGHC N N+ERAFMLLKEMD K V PDEVT+NTLMQG CR GKVE+AR LL
Sbjct: 417  DVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476

Query: 724  NEMKERGIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKN 903
            +EMK RGIKPDHISYNTLISGY R+GDIKDAF VRDEML+ GFNPTLLTYNALI+ LCKN
Sbjct: 477  DEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKN 536

Query: 904  KDGNHAEELLKEMLSKGITPDDSTYISLVEGMGKDENLVE 1023
            ++G+ AEELLKEM++KGI+PDDSTY+SL+EGMG  + LVE
Sbjct: 537  QEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576



 Score =  180 bits (457), Expect = 6e-43
 Identities = 93/243 (38%), Positives = 149/243 (61%)
 Frame = +1

Query: 268 MEGKMTEVDRLMKELEQKNMVPDNITYNILINGYSKEGNARKAFELHEEMLSKGITPTVG 447
           +EGK+ +    +  +E     P+ ++YN +I+GYS  GN   A  + + M  KGI P   
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 448 TYTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFNTLIDGHCINKNMERAFMLLKEM 627
           TY SLI  + K  R+ EA  LF+++   GL P+ + +NTLIDG+C   ++ERAF    EM
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 628 DEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKERGIKPDHISYNTLISGYSRKGDI 807
            +K + P   TYN L+  L   G++ +A  ++ EM+++GI PD I+YN LI+GYSR G+ 
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 808 KDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKEMLSKGITPDDSTYISL 987
           K AF + +EML+KG  PT +TY +LI  L +      A++L +++L +G++PD   + ++
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424

Query: 988 VEG 996
           ++G
Sbjct: 425 IDG 427



 Score =  168 bits (426), Expect = 2e-39
 Identities = 96/309 (31%), Positives = 170/309 (55%), Gaps = 1/309 (0%)
 Frame = +1

Query: 100  MSQNKL-VPSAVTYNTLIDAYCNKGNLVIAFKYRDEMVKKGIHPTLLTYNVLIHALFMEG 276
            +S+++L V S++ ++ L      +G L  A ++   M   G  P +++YN +IH     G
Sbjct: 169  LSRDRLSVKSSIVFDLL------EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRG 222

Query: 277  KMTEVDRLMKELEQKNMVPDNITYNILINGYSKEGNARKAFELHEEMLSKGITPTVGTYT 456
             +    R++  +  K + PD+ TY  LI+G  KEG   +A  L ++M+  G+ P   TY 
Sbjct: 223  NIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYN 282

Query: 457  SLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFNTLIDGHCINKNMERAFMLLKEMDEK 636
            +LI     +  +  A    +++  KG+ P +  +N L+    +   M  A  ++KEM +K
Sbjct: 283  TLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 342

Query: 637  KVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKERGIKPDHISYNTLISGYSRKGDIKDA 816
             + PD +TYN L+ G  R G  + A  L NEM  +GI+P H++Y +LI   SR+  +K+A
Sbjct: 343  GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402

Query: 817  FSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKEMLSKGITPDDSTYISLVEG 996
              + +++L++G +P ++ +NA+I G C N +   A  LLKEM  K + PD+ T+ +L++G
Sbjct: 403  DDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 462

Query: 997  MGKDENLVE 1023
              ++  + E
Sbjct: 463  RCREGKVEE 471



 Score =  166 bits (421), Expect = 8e-39
 Identities = 92/262 (35%), Positives = 149/262 (56%)
 Frame = +1

Query: 1    QKGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLV 180
            +KG+     T+  ++ AL   GR+ EA  + ++M +  ++P A+TYN LI+ Y   GN  
Sbjct: 306  KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 181  IAFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILI 360
             AF   +EM+ KGI PT +TY  LI+ L    +M E D L +++  + + PD I +N +I
Sbjct: 366  RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 361  NGYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLS 540
            +G+   GN  +AF L +EM  K + P   T+ +L+    +  ++ EA  L +++K +G+ 
Sbjct: 426  DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 541  PDMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGL 720
            PD I +NTLI G+    +++ AF +  EM      P  +TYN L++ LC+  + + A  L
Sbjct: 486  PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 545

Query: 721  LNEMKERGIKPDHISYNTLISG 786
            L EM  +GI PD  +Y +LI G
Sbjct: 546  LKEMVNKGISPDDSTYLSLIEG 567



 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
 Frame = +1

Query: 604 AFMLLKEMDEKKVAPDEVTYNTLMQGLCRV------------GKVEDARGLLNEMKERGI 747
           A  LLK++ E ++A +   ++ L     R+            GK++ AR  +  M+  G 
Sbjct: 145 ALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGF 204

Query: 748 KPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEE 927
           KP+ +SYNT+I GYS +G+I+ A  + D M  KG  P   TY +LI G+CK      A  
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 928 LLKEMLSKGITPDDSTYISLVEG 996
           L  +M+  G+ P+  TY +L++G
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDG 287


>ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541792|gb|EEF43340.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 643

 Score =  491 bits (1263), Expect = e-136
 Identities = 237/340 (69%), Positives = 287/340 (84%)
 Frame = +1

Query: 4    KGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVI 183
            +GV+ DSYT+GS+IS +CK G+LEEA  + EKM +  L+P+AVTYNTLID YCNKG+LV 
Sbjct: 300  RGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVK 359

Query: 184  AFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILIN 363
            AF YRDEMV++ I PT+ TYN+LIHALF+EGKM E D ++K++    +VPD+ITYNILIN
Sbjct: 360  AFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILIN 419

Query: 364  GYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSP 543
            GY + GNA+KAF LH+EM+SKGI PT+ TYTSLIYVL KR RM  AD+LFE+I  +G SP
Sbjct: 420  GYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASP 479

Query: 544  DMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLL 723
            D+IMFN LIDGHC N N++RAF LLKEMD++ + PDEVTYNTLMQG CR GKVE+AR LL
Sbjct: 480  DLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELL 539

Query: 724  NEMKERGIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKN 903
             EMK RGI+PDHISYNTLISGYS++GDI DAF++RDEML+ GFNPTLLTYNALIQGLCKN
Sbjct: 540  KEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKN 599

Query: 904  KDGNHAEELLKEMLSKGITPDDSTYISLVEGMGKDENLVE 1023
            + G+ AEELLKEM+SKGITPDDSTY SL+EG+GK ++  E
Sbjct: 600  QQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639



 Score =  211 bits (537), Expect = 3e-52
 Identities = 112/332 (33%), Positives = 188/332 (56%)
 Frame = +1

Query: 22   SYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVIAFKYRD 201
            S  F  +I A C+L R ++A   F+ M +  +VP   T+N ++  +         +    
Sbjct: 166  SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225

Query: 202  EMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILINGYSKEG 381
            EM +  I  T+ T+N++I+ L  EGK+ +    +  +E   + P+ +TYN +I+GY   G
Sbjct: 226  EMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285

Query: 382  NARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFN 561
                A  + + M ++G+ P   TY SLI  + K  ++ EA  + E++K  GL P  + +N
Sbjct: 286  RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 562  TLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKER 741
            TLIDG+C   ++ +AF    EM  + + P   TYN L+  L   GK+++A G++ +M + 
Sbjct: 346  TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 742  GIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHA 921
            GI PD I+YN LI+GY R G+ K AF++ DEM++KG  PTL+TY +LI  L K      A
Sbjct: 406  GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 922  EELLKEMLSKGITPDDSTYISLVEGMGKDENL 1017
            ++L ++++ +G +PD   + +L++G   + NL
Sbjct: 466  DDLFEKIIREGASPDLIMFNALIDGHCANGNL 497



 Score =  114 bits (285), Expect = 5e-23
 Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 5/199 (2%)
 Frame = +1

Query: 442  VGTYTSLIYVLGKR-----KRMNEADELFEQIKSKGLSPDMIMFNTLIDGHCINKNMERA 606
            +GT +S+++ +  R     KR ++A E F+ +K KG+ P +  FN ++         E  
Sbjct: 161  LGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETV 220

Query: 607  FMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKERGIKPDHISYNTLISG 786
            ++L  EM   K+     T+N ++  LC+ GK++ A+  +  M+  G+KP+ ++YNT+I G
Sbjct: 221  WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHG 280

Query: 787  YSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKEMLSKGITPD 966
            Y  +G ++ A  V D M N+G  P   TY +LI G+CK      A  +L++M   G+ P 
Sbjct: 281  YCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPT 340

Query: 967  DSTYISLVEGMGKDENLVE 1023
              TY +L++G     +LV+
Sbjct: 341  AVTYNTLIDGYCNKGDLVK 359



 Score =  106 bits (265), Expect = 1e-20
 Identities = 61/169 (36%), Positives = 88/169 (52%)
 Frame = +1

Query: 1   QKGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLV 180
           ++G   D   F ++I   C  G L+ A AL ++M +  +VP  VTYNTL+   C +G + 
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533

Query: 181 IAFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILI 360
            A +   EM ++GI P  ++YN LI      G + +   +  E+      P  +TYN LI
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593

Query: 361 NGYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADE 507
            G  K      A EL +EM+SKGITP   TY SLI  +GK    +EA +
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642


>ref|XP_002330266.1| predicted protein [Populus trichocarpa] gi|222871301|gb|EEF08432.1|
            predicted protein [Populus trichocarpa]
          Length = 590

 Score =  489 bits (1260), Expect = e-136
 Identities = 234/336 (69%), Positives = 285/336 (84%)
 Frame = +1

Query: 4    KGVKLDSYTFGSIISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVI 183
            +GVK DSYT+GS IS +CK G+LEEA  + EKM +  L P+AVTYNTLID YCNKGNL +
Sbjct: 255  RGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEM 314

Query: 184  AFKYRDEMVKKGIHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILIN 363
            AF YRD+MV++G+ PT+ TYN+LIHALF++ KM E D ++KE+ +K +VPD++TYNILIN
Sbjct: 315  AFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILIN 374

Query: 364  GYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSP 543
            GY + GN +KAF LH+EM+SKGI PT  TYTSLIYVL KR RM +AD+LFE+I  KG+ P
Sbjct: 375  GYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434

Query: 544  DMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLL 723
            D+IMFN LIDGHC N NM+RAF +LKEMD+ KV PDEVT+NTLMQG CR GKVE AR L+
Sbjct: 435  DLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELI 494

Query: 724  NEMKERGIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKN 903
             EMK RGIKPDHISYNTLISGYS++GD+KDAF VRDEML+ GFNPTLLTYNALIQGLCKN
Sbjct: 495  EEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKN 554

Query: 904  KDGNHAEELLKEMLSKGITPDDSTYISLVEGMGKDE 1011
            ++G+HAE+LLKEM+SKGITP+D+TY+SL+EG+G  E
Sbjct: 555  EEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNVE 590



 Score =  202 bits (515), Expect = 1e-49
 Identities = 107/326 (32%), Positives = 183/326 (56%)
 Frame = +1

Query: 40   IISALCKLGRLEEAVALFEKMSQNKLVPSAVTYNTLIDAYCNKGNLVIAFKYRDEMVKKG 219
            +I A C+L R ++A   F+ M    ++P     N ++  +        A+    EM +  
Sbjct: 127  LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMR 186

Query: 220  IHPTLLTYNVLIHALFMEGKMTEVDRLMKELEQKNMVPDNITYNILINGYSKEGNARKAF 399
            I  +++T+N++I+ L  EGK+ +    +  +E   + P+ +TYN +I+GY   G    A 
Sbjct: 187  IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGAR 246

Query: 400  ELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFNTLIDGH 579
             + + M  +G+ P   TY S I  + K  ++ EA  + E++K  GL P  + +NTLIDG+
Sbjct: 247  MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306

Query: 580  CINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKERGIKPDH 759
            C   N+E AF    +M  + + P   TYN L+  L    K+++A G++ EM E+G+ PD 
Sbjct: 307  CNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDS 366

Query: 760  ISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKE 939
            ++YN LI+GY R G++K AF++ DEM++KG  PT +TY +LI  L K      A++L ++
Sbjct: 367  VTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEK 426

Query: 940  MLSKGITPDDSTYISLVEGMGKDENL 1017
            ++ KGI PD   + +L++G   + N+
Sbjct: 427  IVRKGIFPDLIMFNALIDGHCANGNM 452



 Score =  130 bits (327), Expect = 7e-28
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 35/254 (13%)
 Frame = +1

Query: 340 ITYNILINGYSKEGNARKAFELHEEMLSKGITPTVGTYTSLIYVLGKRKRMNEADELFEQ 519
           + Y++LI    +      AFE  + M  KG+ P V     ++ +  K  R  +A  L+ +
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 520 IKSKGLSPDMIMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTL--------- 672
           +    +   ++ FN +I+  C    +++A   +  M+   + P+ VTYNT+         
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 673 --------------------------MQGLCRVGKVEDARGLLNEMKERGIKPDHISYNT 774
                                     + G+C+ GK+E+A G+L +MKE G++P  ++YNT
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 775 LISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKEMLSKG 954
           LI GY  KG+++ AF  RD+M+ +G  PT+ TYN LI  L  +   + A+ ++KEM  KG
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 955 ITPDDSTYISLVEG 996
           + PD  TY  L+ G
Sbjct: 362 LVPDSVTYNILING 375



 Score =  110 bits (274), Expect = 9e-22
 Identities = 60/189 (31%), Positives = 102/189 (53%)
 Frame = +1

Query: 451  YTSLIYVLGKRKRMNEADELFEQIKSKGLSPDMIMFNTLIDGHCINKNMERAFMLLKEMD 630
            Y  LI    + KR ++A E F+ +K KG+ P +   N ++     +   E+A++L  EM 
Sbjct: 124  YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 631  EKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNEMKERGIKPDHISYNTLISGYSRKGDIK 810
              ++    VT+N ++  LC+ GK++ A+  +  M+  GIKP+ ++YNT+I GY  +G ++
Sbjct: 184  RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 811  DAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKDGNHAEELLKEMLSKGITPDDSTYISLV 990
             A  + D M  +G  P   TY + I G+CK      A  +L++M   G+ P   TY +L+
Sbjct: 244  GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 991  EGMGKDENL 1017
            +G     NL
Sbjct: 304  DGYCNKGNL 312



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 45/158 (28%), Positives = 70/158 (44%)
 Frame = +1

Query: 550  IMFNTLIDGHCINKNMERAFMLLKEMDEKKVAPDEVTYNTLMQGLCRVGKVEDARGLLNE 729
            ++++ LI   C  K  + AF     M  K V P     N ++    +  + E A  L  E
Sbjct: 122  VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 730  MKERGIKPDHISYNTLISGYSRKGDIKDAFSVRDEMLNKGFNPTLLTYNALIQGLCKNKD 909
            M    IK   +++N +I+   ++G +K A      M   G  P ++TYN +I G C    
Sbjct: 182  MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 910  GNHAEELLKEMLSKGITPDDSTYISLVEGMGKDENLVE 1023
               A  +   M  +G+ PD  TY S + GM K+  L E
Sbjct: 242  VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279