BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023463
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   123   2e-26
ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...    56   3e-07

>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  123 bits (308), Expect = 2e-26
 Identities = 75/127 (59%), Positives = 80/127 (62%), Gaps = 15/127 (11%)
 Frame = +1

Query: 124 RSFFSVQHRKAPSFC----HPCSF--PEAFFWY*THGVARTLQIMFEPMFKPTP*R---- 273
           R+F +V + +  S C     PC F  P A+                 PMFKPTP      
Sbjct: 295 RTFSTVPYPRTSSLCAKQDRPCPFSIPLAY-----------------PMFKPTPPPHLNK 337

Query: 274 --KNARQVQITECFPQPLKERLDEGREMLRGKENAFGDPYFF---SSKTKKAEDGLRCVL 438
             KNARQVQI ECFPQPLKERLDEGREM RGKENAFGD YFF   SSKTKKAEDGLRCVL
Sbjct: 338 AGKNARQVQIRECFPQPLKERLDEGREMRRGKENAFGDRYFFIYLSSKTKKAEDGLRCVL 397

Query: 439 SEGNTHF 459
           SEGNT F
Sbjct: 398 SEGNTLF 404


>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score = 56.2 bits (134), Expect(2) = 3e-07
 Identities = 27/31 (87%), Positives = 27/31 (87%)
 Frame = +3

Query: 303 MLPPTTKGKARRREGDAAGEGKRFRRSIFFF 395
           ML PT KGKARRREG AAGEGKRFRRS FFF
Sbjct: 1   MLSPTIKGKARRREGGAAGEGKRFRRSRFFF 31



 Score = 23.1 bits (48), Expect(2) = 3e-07
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 385 YFFSSKTKKAEDGLRCVLSEGNTHFDRGGMIA 480
           +FF  K ++          +G   FDR GMIA
Sbjct: 29  FFFHRKRRRPRMAYGASYLKGTRFFDRRGMIA 60