BLASTX nr result

ID: Coptis24_contig00023455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023455
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41456.1| unknown [Lotus japonicus]                              137   3e-30
gb|AFK49088.1| unknown [Lotus japonicus]                              135   7e-30
ref|XP_003542180.1| PREDICTED: uncharacterized protein LOC100797...   132   7e-29
ref|NP_001236174.1| uncharacterized protein LOC100306260 [Glycin...   127   2e-27
ref|XP_002303082.1| predicted protein [Populus trichocarpa] gi|2...   125   9e-27

>gb|AFK41456.1| unknown [Lotus japonicus]
          Length = 145

 Score =  137 bits (344), Expect = 3e-30
 Identities = 82/158 (51%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
 Frame = -3

Query: 628 MDDYM-KRNHIPAFGNWDYEDGLPITQYFESARQAGLLRYTYNGDADLYSYSGYDHDQDL 452
           MD+Y  KRNH+PAFG+WD+ D LP TQ FESARQAGLLRY+Y    +   Y   D  ++ 
Sbjct: 1   MDEYYYKRNHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYAASEEQDLYVAGDLYENH 60

Query: 451 YMKPATITVVPRRKMKTKGEGEKTYLPQIKEQKKQRKVYDVDQRARQQQQIVAPSGR-AP 275
            + PA I VVPRR+ K +G       PQ K+ KKQ  V  V     ++ Q   P  R  P
Sbjct: 61  VVTPAMI-VVPRRREKVRG-------PQDKDVKKQNWVNSV-----KEPQNTGPISRPTP 107

Query: 274 KAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 161
           K VDEDLYKI PELLY    KKR F FFLSCL+P+C A
Sbjct: 108 KPVDEDLYKISPELLYVKSTKKRGFCFFLSCLLPTCIA 145


>gb|AFK49088.1| unknown [Lotus japonicus]
          Length = 145

 Score =  135 bits (341), Expect = 7e-30
 Identities = 81/158 (51%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
 Frame = -3

Query: 628 MDDYM-KRNHIPAFGNWDYEDGLPITQYFESARQAGLLRYTYNGDADLYSYSGYDHDQDL 452
           MD+Y  KRNH+PAFG+WD+ D LP TQ FESARQAGLLRY+Y    +   Y   D  ++ 
Sbjct: 1   MDEYYYKRNHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYAASEEQDLYVAGDLYENH 60

Query: 451 YMKPATITVVPRRKMKTKGEGEKTYLPQIKEQKKQRKVYDVDQRARQQQQIVAPSGR-AP 275
            + P+ I VVPRR+ K +G       PQ K+ KKQ  V  V     ++ Q   P  R  P
Sbjct: 61  VVTPSMI-VVPRRREKVRG-------PQDKDVKKQNWVNSV-----KEPQNTGPISRPTP 107

Query: 274 KAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 161
           K VDEDLYKI PELLY    KKR F FFLSCL+P+C A
Sbjct: 108 KPVDEDLYKISPELLYVKSTKKRGFCFFLSCLLPTCIA 145


>ref|XP_003542180.1| PREDICTED: uncharacterized protein LOC100797475 [Glycine max]
          Length = 146

 Score =  132 bits (332), Expect = 7e-29
 Identities = 75/153 (49%), Positives = 96/153 (62%)
 Frame = -3

Query: 619 YMKRNHIPAFGNWDYEDGLPITQYFESARQAGLLRYTYNGDADLYSYSGYDHDQDLYMKP 440
           Y +R+H+PAFG+WD+ D LP TQ FESARQAGLLRY Y+   D   Y   D  ++ ++KP
Sbjct: 5   YYQRHHVPAFGSWDWNDNLPFTQCFESARQAGLLRYGYSESEDRDLYVTGDLYENDFVKP 64

Query: 439 ATITVVPRRKMKTKGEGEKTYLPQIKEQKKQRKVYDVDQRARQQQQIVAPSGRAPKAVDE 260
           A I VVPRR+ K + + E       K++KKQ  V +V +       I  P    PK VDE
Sbjct: 65  AVI-VVPRRREKVRCQNE-------KDEKKQNWVSNVKELPSPTSPIQRPK---PKPVDE 113

Query: 259 DLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 161
           DLYKI PELLY+  +KKR   FF SCL+P+C A
Sbjct: 114 DLYKISPELLYAKNRKKRGLCFFPSCLMPTCIA 146


>ref|NP_001236174.1| uncharacterized protein LOC100306260 [Glycine max]
           gi|255628031|gb|ACU14360.1| unknown [Glycine max]
          Length = 146

 Score =  127 bits (320), Expect = 2e-27
 Identities = 74/153 (48%), Positives = 93/153 (60%)
 Frame = -3

Query: 619 YMKRNHIPAFGNWDYEDGLPITQYFESARQAGLLRYTYNGDADLYSYSGYDHDQDLYMKP 440
           Y KR+H+PAFG+WD+ D LP TQ FE+ARQAGLLRY+Y+   D   Y   D  ++  + P
Sbjct: 5   YYKRHHVPAFGSWDWNDNLPFTQCFETARQAGLLRYSYSESEDRDLYVTGDLYENDVVTP 64

Query: 439 ATITVVPRRKMKTKGEGEKTYLPQIKEQKKQRKVYDVDQRARQQQQIVAPSGRAPKAVDE 260
           A I VVPRR+ K + + E       KE KKQ    +V +       I  P    PK VDE
Sbjct: 65  AMI-VVPRRREKVRCQNE-------KEAKKQSWRSNVKELPSPTSPIQRPK---PKPVDE 113

Query: 259 DLYKIPPELLYSYPKKKRTFGFFLSCLVPSCAA 161
           DLYKI PELLY+  +KKR   FF SCL+P+C A
Sbjct: 114 DLYKISPELLYAKTRKKRGLCFFPSCLIPTCIA 146


>ref|XP_002303082.1| predicted protein [Populus trichocarpa] gi|222844808|gb|EEE82355.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  125 bits (314), Expect = 9e-27
 Identities = 72/157 (45%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
 Frame = -3

Query: 625 DDYMKRNHIPAFGNWDYEDGLPITQYFESARQAGLLRYTYNGDADLYSYSGYDHDQDLYM 446
           D Y  R+H+PAFG+WD+ + +P TQ FESARQAGLLRY+Y+ D DLY  +G  ++ D+  
Sbjct: 3   DYYYSRSHVPAFGSWDWNNDMPFTQCFESARQAGLLRYSYSEDRDLY-VAGDLYENDVV- 60

Query: 445 KPATITVVPRRKMKTKGEGEKTYLPQIKEQKKQRK---VYDVDQRARQQQQIVAPSGRAP 275
              T+ VVPRR+       EK   P+ KE+K+++      DV +          P+   P
Sbjct: 61  -TPTMIVVPRRR-------EKMRRPRAKEEKREQSWAVTSDVKESPSPPPMSTRPT---P 109

Query: 274 KAVDEDLYKIPPELLYSYPKKKRTFGFFLSCLVPSCA 164
           K VDEDLYKI PELLY+  KK+    FF SCL+P+CA
Sbjct: 110 KPVDEDLYKISPELLYAKTKKRGGLCFFSSCLMPACA 146


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