BLASTX nr result

ID: Coptis24_contig00023451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023451
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327989.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002529479.1| Transcription factor RF2a, putative [Ricinus...    80   1e-13
emb|CBI36720.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002270784.1| PREDICTED: probable transcription factor Pos...    79   4e-13
ref|XP_004147658.1| PREDICTED: probable transcription factor Pos...    79   5e-13

>ref|XP_002327989.1| predicted protein [Populus trichocarpa] gi|222837398|gb|EEE75777.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
 Frame = -2

Query: 293 DLGVVG---IGPSLSDETEEDLFSMYIDMDKFTAXXXXXXXXXXXXXXXXXTGFNDRPRI 123
           DLGVVG    GP+ SDETEEDL SMY+DMDKF +                  G ++RPR+
Sbjct: 57  DLGVVGGGADGPTFSDETEEDLLSMYLDMDKFNS----SSATSTFQVGDLGAGPSERPRV 112

Query: 122 RHHHSQSMDGSTSI----LSTSDGGTTFTENKKAISSSKLADLA 3
           RH HSQSMDGST+I    L +     +  ++KKA+S++KLA+LA
Sbjct: 113 RHQHSQSMDGSTTIKPEMLMSGSEEASPADSKKAVSAAKLAELA 156


>ref|XP_002529479.1| Transcription factor RF2a, putative [Ricinus communis]
           gi|223531037|gb|EEF32889.1| Transcription factor RF2a,
           putative [Ricinus communis]
          Length = 425

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 23/120 (19%)
 Frame = -2

Query: 293 DLGVVG--IGPSLSDETEEDLFSMYIDMDKF-----------------TAXXXXXXXXXX 171
           DLGVVG   GPS SDETEEDLFSMY+DMDKF                 T           
Sbjct: 99  DLGVVGGADGPSFSDETEEDLFSMYLDMDKFNSSSATSAFQLGESSIPTPAALASASAQA 158

Query: 170 XXXXXXXTGFNDRPRIRHHHSQSMDGSTSI----LSTSDGGTTFTENKKAISSSKLADLA 3
                   G ++RPRIRH HSQSMDGST+I    L +     +  + KKA+S++KLA+LA
Sbjct: 159 PATVDVGAGPSERPRIRHQHSQSMDGSTTIKPEMLISGAEEVSPADTKKAMSAAKLAELA 218


>emb|CBI36720.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 53/116 (45%), Positives = 64/116 (55%), Gaps = 19/116 (16%)
 Frame = -2

Query: 293 DLGVVG--IGPSLSDETEEDLFSMYIDMDKFTAXXXXXXXXXXXXXXXXXTGF------- 141
           DLGVVG   GPS SDETEEDLFSMY+DMDK  +                  G        
Sbjct: 30  DLGVVGGADGPSFSDETEEDLFSMYLDMDKLNSSSATSSFQMGEPSSAAPLGSASAAMTE 89

Query: 140 ------NDRPRIRHHHSQSMDGSTSI----LSTSDGGTTFTENKKAISSSKLADLA 3
                 NDR R+RH HSQSMDGSTSI    L +     +  ++KKA+S++KLA+LA
Sbjct: 90  NVVARPNDR-RVRHQHSQSMDGSTSIKPEMLMSGSDENSAADSKKAMSAAKLAELA 144


>ref|XP_002270784.1| PREDICTED: probable transcription factor PosF21 [Vitis vinifera]
          Length = 425

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 53/116 (45%), Positives = 64/116 (55%), Gaps = 19/116 (16%)
 Frame = -2

Query: 293 DLGVVG--IGPSLSDETEEDLFSMYIDMDKFTAXXXXXXXXXXXXXXXXXTGF------- 141
           DLGVVG   GPS SDETEEDLFSMY+DMDK  +                  G        
Sbjct: 101 DLGVVGGADGPSFSDETEEDLFSMYLDMDKLNSSSATSSFQMGEPSSAAPLGSASAAMTE 160

Query: 140 ------NDRPRIRHHHSQSMDGSTSI----LSTSDGGTTFTENKKAISSSKLADLA 3
                 NDR R+RH HSQSMDGSTSI    L +     +  ++KKA+S++KLA+LA
Sbjct: 161 NVVARPNDR-RVRHQHSQSMDGSTSIKPEMLMSGSDENSAADSKKAMSAAKLAELA 215


>ref|XP_004147658.1| PREDICTED: probable transcription factor PosF21-like [Cucumis
           sativus] gi|449498835|ref|XP_004160648.1| PREDICTED:
           probable transcription factor PosF21-like [Cucumis
           sativus]
          Length = 412

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 17/114 (14%)
 Frame = -2

Query: 293 DLGVVG--IGPSLSDETEEDLFSMYIDMDKFTA-----------XXXXXXXXXXXXXXXX 153
           DLG++G   GPSLSD+TEEDL SMY+DMDKF +                           
Sbjct: 107 DLGIIGGADGPSLSDDTEEDLLSMYLDMDKFNSSTATSANQVGDSSSPLVEAAATSTDDI 166

Query: 152 XTGFNDRPRIRHHHSQSMDGSTSI----LSTSDGGTTFTENKKAISSSKLADLA 3
             G  +RPR+RH HSQSMDG T+I    L +     +  + KKA+S++KLA+LA
Sbjct: 167 AVGLKERPRVRHQHSQSMDGLTNIKPEMLVSGSDEASAADAKKAMSAAKLAELA 220


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