BLASTX nr result

ID: Coptis24_contig00023450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023450
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77825.1| hypothetical protein VITISV_015458 [Vitis vinifera]   385   e-105
emb|CBI32314.3| unnamed protein product [Vitis vinifera]              382   e-104
emb|CBI34341.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002321053.1| predicted protein [Populus trichocarpa] gi|2...   368   e-100
ref|XP_002328421.1| predicted protein [Populus trichocarpa] gi|2...   351   1e-94

>emb|CAN77825.1| hypothetical protein VITISV_015458 [Vitis vinifera]
          Length = 2393

 Score =  385 bits (988), Expect = e-105
 Identities = 184/250 (73%), Positives = 206/250 (82%)
 Frame = +1

Query: 1   LVYWSLTSNYLGLFRWWRPLLIYAGCNIVLLYMFQLPIRLPKMFQTASDFIGLYKLSSTT 180
           LV WSLTSN+LGLFRWWRPL +YAG NIV LY++QLPI LPK+FQ  +DFIGLYK+S  +
Sbjct: 160 LVDWSLTSNFLGLFRWWRPLQLYAGFNIVFLYVYQLPIGLPKLFQRIADFIGLYKISGKS 219

Query: 181 EWPEISSAISLLIFYFMLSSIRCDLEEMGFIMSMQESSLTEQLLPSKHSFFIRESRSGVR 360
           +WPEI SA+SL++FY +LS I+CDLEEM FIMS  ES LT QLLPSKHSFFIRESRSGVR
Sbjct: 220 DWPEICSALSLVVFYIVLSYIKCDLEEMDFIMSTGESDLTNQLLPSKHSFFIRESRSGVR 279

Query: 361 HANVLLRGAVFRTFSINFFTYGFPVLLLALSFWSFNFTSLCAFGLLVYVGYVLYAFPSXX 540
           H NVLLRG+VFRTFSINFFTYGFPV L ALSFWSF+FTS+CAFGLL YVGYV+YAFPS  
Sbjct: 280 HTNVLLRGSVFRTFSINFFTYGFPVSLFALSFWSFHFTSVCAFGLLAYVGYVVYAFPSLF 339

Query: 541 XXXXXXXXXXVFILFWTASTYVFNVAFTFLNKKLGKDMEIWETVGFWHYPIPGVYLFAQF 720
                     VFIL W  STY+FNVAF FL+ +LGKDMEIWE VG WHYPIPG +L AQF
Sbjct: 340 HLHRLNGLLLVFILLWAVSTYIFNVAFAFLDLQLGKDMEIWEMVGLWHYPIPGFFLLAQF 399

Query: 721 CLGFLVAVGN 750
            LG LVAVGN
Sbjct: 400 GLGILVAVGN 409


>emb|CBI32314.3| unnamed protein product [Vitis vinifera]
          Length = 2409

 Score =  382 bits (982), Expect = e-104
 Identities = 183/250 (73%), Positives = 205/250 (82%)
 Frame = +1

Query: 1   LVYWSLTSNYLGLFRWWRPLLIYAGCNIVLLYMFQLPIRLPKMFQTASDFIGLYKLSSTT 180
           LV WSLTSN+LGLFRWWRPL +YA  NIV LY++QLPI LPK+FQ  +DFIGLYK+S  +
Sbjct: 213 LVDWSLTSNFLGLFRWWRPLQLYAAFNIVFLYVYQLPIGLPKLFQRIADFIGLYKISGKS 272

Query: 181 EWPEISSAISLLIFYFMLSSIRCDLEEMGFIMSMQESSLTEQLLPSKHSFFIRESRSGVR 360
           +WPEI SA+SL++FY +LS I+CDLEEM FIMS  ES LT QLLPSKHSFFIRESRSGVR
Sbjct: 273 DWPEICSALSLVVFYIVLSYIKCDLEEMDFIMSTGESDLTNQLLPSKHSFFIRESRSGVR 332

Query: 361 HANVLLRGAVFRTFSINFFTYGFPVLLLALSFWSFNFTSLCAFGLLVYVGYVLYAFPSXX 540
           H NVLLRG+VFRTFSINFFTYGFPV L ALSFWSF+FTS+CAFGLL YVGYV+YAFPS  
Sbjct: 333 HTNVLLRGSVFRTFSINFFTYGFPVSLFALSFWSFHFTSVCAFGLLAYVGYVVYAFPSLF 392

Query: 541 XXXXXXXXXXVFILFWTASTYVFNVAFTFLNKKLGKDMEIWETVGFWHYPIPGVYLFAQF 720
                     VFIL W  STY+FNVAF FL+ +LGKDMEIWE VG WHYPIPG +L AQF
Sbjct: 393 HLHRLNGLLLVFILLWAVSTYIFNVAFAFLDLQLGKDMEIWEMVGLWHYPIPGFFLLAQF 452

Query: 721 CLGFLVAVGN 750
            LG LVAVGN
Sbjct: 453 GLGILVAVGN 462


>emb|CBI34341.3| unnamed protein product [Vitis vinifera]
          Length = 2376

 Score =  380 bits (975), Expect = e-103
 Identities = 178/250 (71%), Positives = 205/250 (82%)
 Frame = +1

Query: 1   LVYWSLTSNYLGLFRWWRPLLIYAGCNIVLLYMFQLPIRLPKMFQTASDFIGLYKLSSTT 180
           LV WSLTSN+LGLFRWWR LL+YAG N+ +LY++QLPI   K F   ++F+GLYK+S+ +
Sbjct: 184 LVDWSLTSNFLGLFRWWRYLLLYAGLNMAVLYVYQLPIEFTKTFMWVANFLGLYKISAES 243

Query: 181 EWPEISSAISLLIFYFMLSSIRCDLEEMGFIMSMQESSLTEQLLPSKHSFFIRESRSGVR 360
           EW EI S +SLL FY+ML+ +RCDL EM FIMS  E+SLTEQLLPSKHSFFIR+SRSGVR
Sbjct: 244 EWSEICSGLSLLFFYYMLTWVRCDLMEMDFIMSSTENSLTEQLLPSKHSFFIRQSRSGVR 303

Query: 361 HANVLLRGAVFRTFSINFFTYGFPVLLLALSFWSFNFTSLCAFGLLVYVGYVLYAFPSXX 540
           HANVLLRGAVFRTF INFFTYGFP+ LLALSFWSF+F SLCA GLL YVG++LYAFPS  
Sbjct: 304 HANVLLRGAVFRTFCINFFTYGFPISLLALSFWSFHFASLCALGLLAYVGHLLYAFPSVF 363

Query: 541 XXXXXXXXXXVFILFWTASTYVFNVAFTFLNKKLGKDMEIWETVGFWHYPIPGVYLFAQF 720
                     VFIL W ASTY+FNVAF FLNKK+GKDMEIWET+G WHYPIPG YL AQF
Sbjct: 364 HLHRLNGLLLVFILLWAASTYIFNVAFAFLNKKMGKDMEIWETIGLWHYPIPGFYLLAQF 423

Query: 721 CLGFLVAVGN 750
           CLG L+A+GN
Sbjct: 424 CLGILIALGN 433


>ref|XP_002321053.1| predicted protein [Populus trichocarpa] gi|222861826|gb|EEE99368.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  368 bits (944), Expect = e-100
 Identities = 173/250 (69%), Positives = 201/250 (80%)
 Frame = +1

Query: 1   LVYWSLTSNYLGLFRWWRPLLIYAGCNIVLLYMFQLPIRLPKMFQTASDFIGLYKLSSTT 180
           LV WSLTSN+LGLFRWWRPL +YA  NI+LLY +QLPI      Q  +DFIGL+K+S  +
Sbjct: 162 LVDWSLTSNFLGLFRWWRPLQLYASVNIILLYTYQLPIEFLSTLQWIADFIGLFKISGRS 221

Query: 181 EWPEISSAISLLIFYFMLSSIRCDLEEMGFIMSMQESSLTEQLLPSKHSFFIRESRSGVR 360
           EW EI S +SL++FY MLS I+CDLEEM FIMSM+ S+LTEQLLP +HSFFIR+SRSGVR
Sbjct: 222 EWHEICSGLSLVLFYIMLSFIKCDLEEMDFIMSMRGSNLTEQLLPLRHSFFIRKSRSGVR 281

Query: 361 HANVLLRGAVFRTFSINFFTYGFPVLLLALSFWSFNFTSLCAFGLLVYVGYVLYAFPSXX 540
           H NVLLRGAVFRTFSINFFTYGFPV L ALS+WSF+F S+CAFGLL YVGY++YAFPS  
Sbjct: 282 HTNVLLRGAVFRTFSINFFTYGFPVSLFALSYWSFHFASICAFGLLAYVGYIVYAFPSVF 341

Query: 541 XXXXXXXXXXVFILFWTASTYVFNVAFTFLNKKLGKDMEIWETVGFWHYPIPGVYLFAQF 720
                     VFILFW  STY+FNVAF  L+ KLGKDMEIW+ VG WHYP+PG++L AQF
Sbjct: 342 RLHRLNGLLLVFILFWAVSTYIFNVAFPLLSWKLGKDMEIWDMVGLWHYPLPGLFLLAQF 401

Query: 721 CLGFLVAVGN 750
           CLG LVA+GN
Sbjct: 402 CLGILVALGN 411


>ref|XP_002328421.1| predicted protein [Populus trichocarpa] gi|222838136|gb|EEE76501.1|
           predicted protein [Populus trichocarpa]
          Length = 576

 Score =  351 bits (900), Expect = 1e-94
 Identities = 168/250 (67%), Positives = 194/250 (77%)
 Frame = +1

Query: 1   LVYWSLTSNYLGLFRWWRPLLIYAGCNIVLLYMFQLPIRLPKMFQTASDFIGLYKLSSTT 180
           LV WSLTSN+LGLF+WWR L IYAG NI LLY++QLPI +    +  + FIGLYK+ +  
Sbjct: 155 LVNWSLTSNFLGLFQWWRYLFIYAGLNIFLLYVYQLPIEVSGTIECVAGFIGLYKIPARP 214

Query: 181 EWPEISSAISLLIFYFMLSSIRCDLEEMGFIMSMQESSLTEQLLPSKHSFFIRESRSGVR 360
           E  EI S +SLL+FY MLS IRCDL EM FIMS +E++L E+LLP KHSFFI ESRSG R
Sbjct: 215 ELSEICSGLSLLLFYIMLSWIRCDLTEMNFIMSTRENNLNERLLPLKHSFFISESRSGAR 274

Query: 361 HANVLLRGAVFRTFSINFFTYGFPVLLLALSFWSFNFTSLCAFGLLVYVGYVLYAFPSXX 540
           + NVLLRGAVFRTFS+NFFTYGFP+ L ALSFWSF+F SLCAFGLL YVGY+LYAFPS  
Sbjct: 275 NTNVLLRGAVFRTFSVNFFTYGFPISLFALSFWSFHFASLCAFGLLAYVGYILYAFPSLF 334

Query: 541 XXXXXXXXXXVFILFWTASTYVFNVAFTFLNKKLGKDMEIWETVGFWHYPIPGVYLFAQF 720
                     VFIL W  STY+FNVAFT LNKK+ KD+EIWET+G WHYPIPG YL AQF
Sbjct: 335 RLHRLNGLLLVFILLWATSTYIFNVAFTVLNKKMWKDVEIWETIGLWHYPIPGFYLLAQF 394

Query: 721 CLGFLVAVGN 750
           CLG LV++ N
Sbjct: 395 CLGVLVSLVN 404


Top