BLASTX nr result

ID: Coptis24_contig00023448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023448
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34465.3| unnamed protein product [Vitis vinifera]              237   3e-60
ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246...   237   3e-60
ref|XP_002303641.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56
ref|XP_002887894.1| hypothetical protein ARALYDRAFT_474915 [Arab...   218   1e-54
ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246...   217   4e-54

>emb|CBI34465.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score =  237 bits (605), Expect = 3e-60
 Identities = 132/187 (70%), Positives = 146/187 (78%), Gaps = 11/187 (5%)
 Frame = -2

Query: 873 MINCLQSLSK-TTTFLGSPL--------NIKKTPFTGCKNFKSWKSRRLISKRSSAIVCG 721
           +I CLQ L K  +TFLGS          N+++      ++FK     R+  KR   IVCG
Sbjct: 377 VITCLQPLWKFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCG 436

Query: 720 V-FPVDPWAPTIDSQSIASQLFAASLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 544
           +  PVDPWAPTIDSQSIASQLFA SLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 437 LPLPVDPWAPTIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 496

Query: 543 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLREALRKAKDANESNRE-VSE 367
           IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLREALRKA DA ES+ + VS 
Sbjct: 497 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLREALRKAGDAKESSSDVVSG 556

Query: 366 IQNEKKS 346
           I+ E+ S
Sbjct: 557 IKEEEPS 563


>ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246730 isoform 1 [Vitis
           vinifera]
          Length = 189

 Score =  237 bits (605), Expect = 3e-60
 Identities = 132/187 (70%), Positives = 146/187 (78%), Gaps = 11/187 (5%)
 Frame = -2

Query: 873 MINCLQSLSK-TTTFLGSPL--------NIKKTPFTGCKNFKSWKSRRLISKRSSAIVCG 721
           +I CLQ L K  +TFLGS          N+++      ++FK     R+  KR   IVCG
Sbjct: 2   VITCLQPLWKFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCG 61

Query: 720 V-FPVDPWAPTIDSQSIASQLFAASLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 544
           +  PVDPWAPTIDSQSIASQLFA SLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 62  LPLPVDPWAPTIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 121

Query: 543 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLREALRKAKDANESNRE-VSE 367
           IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLREALRKA DA ES+ + VS 
Sbjct: 122 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLREALRKAGDAKESSSDVVSG 181

Query: 366 IQNEKKS 346
           I+ E+ S
Sbjct: 182 IKEEEPS 188


>ref|XP_002303641.1| predicted protein [Populus trichocarpa] gi|222841073|gb|EEE78620.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  224 bits (571), Expect = 2e-56
 Identities = 120/174 (68%), Positives = 137/174 (78%), Gaps = 8/174 (4%)
 Frame = -2

Query: 837 TFLGSPLNIKKTPFTGCKNFKSW----KSRRLISKRSSAIVCG---VFPVDPWAPTIDSQ 679
           +++GS   ++  P   C+  K +    K+R    KR   +VCG   +FPVDPWAP IDSQ
Sbjct: 20  SYVGSSYFLQNLPKDPCRVGKDFYFTEKTRLGGCKRKRRVVCGAGLMFPVDPWAPNIDSQ 79

Query: 678 SIASQLFAASLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSL 499
           SIASQLFA SLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSL
Sbjct: 80  SIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGATIPAGIYAKVHYGTSL 139

Query: 498 SNVDWLHGGAESLLTLTNLFIVMGLREALRKAKDANESNRE-VSEIQNEKKSSV 340
           SNVDWLHGGAESLLTLTNLFIV+GLR+A+R      +S+ + VSEI+ EKK SV
Sbjct: 140 SNVDWLHGGAESLLTLTNLFIVLGLRQAIRNENAPEKSSSDPVSEIEEEKKPSV 193


>ref|XP_002887894.1| hypothetical protein ARALYDRAFT_474915 [Arabidopsis lyrata subsp.
           lyrata] gi|297333735|gb|EFH64153.1| hypothetical protein
           ARALYDRAFT_474915 [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  218 bits (556), Expect = 1e-54
 Identities = 110/138 (79%), Positives = 124/138 (89%), Gaps = 6/138 (4%)
 Frame = -2

Query: 735 AIVC---GVFPVDPWAPTIDSQSIASQLFAASLFPYIGFLYFITKSKTAPKLTLFGFYFL 565
           +IVC   G+FPVDPWAPTIDSQSIASQLFA SLFPYIGFLYF+TKSK+APKLTLFGFYFL
Sbjct: 61  SIVCNAGGMFPVDPWAPTIDSQSIASQLFAVSLFPYIGFLYFLTKSKSAPKLTLFGFYFL 120

Query: 564 LAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLREALRKAKDANE- 388
           LAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLL LTNLFIV+GLR+ALRK++D ++ 
Sbjct: 121 LAFVGATIPAGIYAKVHYGTSLSNVDWLHGGAESLLALTNLFIVLGLRQALRKSEDDDDK 180

Query: 387 --SNREVSEIQNEKKSSV 340
             ++ E S  Q ++KSSV
Sbjct: 181 LGNDEEASTTQEQEKSSV 198


>ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246730 isoform 2 [Vitis
           vinifera]
          Length = 183

 Score =  217 bits (552), Expect = 4e-54
 Identities = 125/187 (66%), Positives = 139/187 (74%), Gaps = 11/187 (5%)
 Frame = -2

Query: 873 MINCLQSLSK-TTTFLGSPL--------NIKKTPFTGCKNFKSWKSRRLISKRSSAIVCG 721
           +I CLQ L K  +TFLGS          N+++      ++FK     R+  KR   IVCG
Sbjct: 2   VITCLQPLWKFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCG 61

Query: 720 V-FPVDPWAPTIDSQSIASQLFAASLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 544
           +  PVDPWAPTIDSQSIASQLFA SLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT
Sbjct: 62  LPLPVDPWAPTIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 121

Query: 543 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLREALRKAKDANESNRE-VSE 367
                  KVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLREALRKA DA ES+ + VS 
Sbjct: 122 ------TKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLREALRKAGDAKESSSDVVSG 175

Query: 366 IQNEKKS 346
           I+ E+ S
Sbjct: 176 IKEEEPS 182


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