BLASTX nr result

ID: Coptis24_contig00023442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023442
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   207   8e-52
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   186   3e-45
ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|2...   174   8e-42
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...   170   2e-40
ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786...   169   4e-40

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  207 bits (528), Expect = 8e-52
 Identities = 109/198 (55%), Positives = 135/198 (68%)
 Frame = +1

Query: 1   ARLHGTINPDFKDIWEAQRHETERAQNSQSPPLYEKLRQSLDIRGDESGNPFTNTRXXXX 180
           AR+ GTI+P+  +IWEA+   +E+ +++ SPPLYEKLRQSL   G  + + F N      
Sbjct: 341 ARMRGTISPELTEIWEARFSRSEKTESADSPPLYEKLRQSLSNGGYNNSDTFGNAENDDE 400

Query: 181 XXXXXXXIPDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHASL 360
                  +PDFGQ D  +PE  N +MD +   +HE      HF  ++ F  ED  S ASL
Sbjct: 401 GNEHDSGVPDFGQPDDDIPE--NMYMDED--LHHEKVGSSTHFDINEAFGNEDPSSQASL 456

Query: 361 EDLCRSHLDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVLDK 540
           EDLCRSHLD+LLA+IAETEKQTELATRVS+WKQ+IE  LEEQDSRP FDIH YG R+LDK
Sbjct: 457 EDLCRSHLDALLANIAETEKQTELATRVSSWKQKIEHNLEEQDSRPSFDIHAYGERILDK 516

Query: 541 LSLEEESGNGMSFANVVR 594
           LSLE    N MSFA+VV+
Sbjct: 517 LSLEANGENVMSFADVVK 534


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  186 bits (472), Expect = 3e-45
 Identities = 99/198 (50%), Positives = 129/198 (65%)
 Frame = +1

Query: 1   ARLHGTINPDFKDIWEAQRHETERAQNSQSPPLYEKLRQSLDIRGDESGNPFTNTRXXXX 180
           AR+HG ++ D  ++WEA+++E  + +N+Q  PLY KLR+SL   G    + F  +     
Sbjct: 343 ARMHGPVSLDLTEMWEARQNELGKHRNTQPTPLYVKLRKSLTNEGHNIPDTFGTSGNDNE 402

Query: 181 XXXXXXXIPDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHASL 360
                   PDFGQ D  +PE ++       PP  ++ DG   F +   F   D  S ASL
Sbjct: 403 DNAYDTGFPDFGQHDDEIPEYKDEDFP---PPREKHDDGATCFDTYKDFGHGDQSSQASL 459

Query: 361 EDLCRSHLDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVLDK 540
           EDLCRSHLD+LLA+IAETEKQTELATRVS+WKQ+IE  LEEQDS PPFDIH YG R++DK
Sbjct: 460 EDLCRSHLDALLANIAETEKQTELATRVSSWKQKIEQNLEEQDSHPPFDIHAYGERIVDK 519

Query: 541 LSLEEESGNGMSFANVVR 594
           LSLE +S N M+F +VV+
Sbjct: 520 LSLEVDSKNVMAFTDVVK 537


>ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|222863405|gb|EEF00536.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  174 bits (442), Expect = 8e-42
 Identities = 100/200 (50%), Positives = 128/200 (64%), Gaps = 2/200 (1%)
 Frame = +1

Query: 1   ARLHGTINPDFKDIWEAQRHETERAQNSQSPPLYEKLRQSLDIR-GDESGNPFTNTRXXX 177
           AR+HGTI+PD   IWEAQ+++  +  N+QSP LYEK+   L +       + + N+    
Sbjct: 353 ARMHGTISPDLAKIWEAQQNKIGKHGNTQSPTLYEKVLVFLLMSLWHNIPDTYGNSGNDN 412

Query: 178 XXXXXXXXIPDFGQDDFTMPEVENTFMDAEGPPNHENPDGDFHFSSDDVFQPEDVPSHAS 357
                   IPDFGQ D  + E  N   D+  P + ++ DG  HF +   F   D  S AS
Sbjct: 413 EDNAYDTGIPDFGQPDEEISECMNE--DSPPPLHEKHDDGGTHFDTYKDFGHGDQRSQAS 470

Query: 358 LEDLCRSHLDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVLD 537
           LEDLCRSHLD+LLA+IAETEKQTELA RVS+WK +IE  LEEQDS PPFDIH YG R++D
Sbjct: 471 LEDLCRSHLDALLANIAETEKQTELAARVSSWKLKIEQNLEEQDSHPPFDIHAYGERIVD 530

Query: 538 KLSLEEESGN-GMSFANVVR 594
           KLSLE +S    M+F +VV+
Sbjct: 531 KLSLETDSKKYVMAFTDVVK 550


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score =  170 bits (430), Expect = 2e-40
 Identities = 101/199 (50%), Positives = 129/199 (64%), Gaps = 2/199 (1%)
 Frame = +1

Query: 1   ARLHGTINPDFKDIWEAQRHETERAQNSQSPPLYEKLRQSLDIRGD-ESGNPFTNTRXXX 177
           A++HG I+P+  +IWE  R   ER Q  Q+PPLYEKLR SL I GD ++ + ++N     
Sbjct: 345 AKMHGPISPELTEIWEKHR-ACERQQEPQTPPLYEKLRNSL-IHGDSQTFSAYSNVEDNK 402

Query: 178 XXXXXXXXIPDFGQDDFTMPEVENTFMDAEGPPNHE-NPDGDFHFSSDDVFQPEDVPSHA 354
                   + DFG +   MP   + +MD + P + E + DG   F S D           
Sbjct: 403 EDGGYDSGVNDFGDE---MPH--DMYMDDDLPLHQEQHDDGAACFDSID----------- 446

Query: 355 SLEDLCRSHLDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVL 534
           +LEDLCRSHLD+LLA+IAETEKQTELA RVSTWKQ+IE  LEEQD RPPFDIH+YG R+L
Sbjct: 447 NLEDLCRSHLDALLANIAETEKQTELAARVSTWKQKIEHDLEEQDLRPPFDIHDYGDRIL 506

Query: 535 DKLSLEEESGNGMSFANVV 591
           +KLS + E+GN MSF+ VV
Sbjct: 507 EKLSHKAENGNVMSFSEVV 525


>ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786571 [Glycine max]
          Length = 674

 Score =  169 bits (427), Expect = 4e-40
 Identities = 97/202 (48%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
 Frame = +1

Query: 1   ARLHGTINPDFKDIWEAQRHETERAQNSQSPPLYEKLRQSLDIRGDESGNPFTNTRXXXX 180
           A+LHG I+P+  ++WE + H  ER ++S +  LYEKLRQSL   G+++G  F N+     
Sbjct: 346 AKLHGPISPELMEMWEMRHHVHERQRDSLAL-LYEKLRQSLVNEGNKTGGTFFNSEADND 404

Query: 181 XXXXXXXIPDFGQDDFTMPEVENTFMDAEGPP-NHENPDGDFHFSSDDVFQPEDVPSHAS 357
                   PDF   D       N +M+ + PP ++E+   D H + D+        S AS
Sbjct: 405 DNEYDGGNPDFDTPD-------NAYMEEDLPPFSNEHEFDDAHINPDEAVDL----SQAS 453

Query: 358 LEDLCRSHLDSLLASIAETEKQTELATRVSTWKQRIESTLEEQDSRPPFDIHEYGTRVLD 537
           LEDLCRSHL++LLASIAETEKQTE+A RVSTWKQRIE+ LEEQ+S PPFDI +YG R+LD
Sbjct: 454 LEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIENNLEEQESHPPFDIQDYGERILD 513

Query: 538 K---LSLEEESGNGMSFANVVR 594
           K   LSLE  S   +SF+++V+
Sbjct: 514 KFSLLSLEASSSGVLSFSDLVK 535


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