BLASTX nr result

ID: Coptis24_contig00023438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023438
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    81   1e-13
emb|CBI37809.3| unnamed protein product [Vitis vinifera]               72   6e-11
gb|AFK36768.1| unknown [Lotus japonicus]                               68   7e-10
gb|ACU01865.1| otubain [Glycine max]                                   68   7e-10
ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800...    65   8e-09

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/140 (34%), Positives = 79/140 (56%), Gaps = 10/140 (7%)
 Frame = -3

Query: 392  DGIGGFMALALALGYRKENWIKVQTDLLVELSCFKQEYVKMFS--------VHGFKNCGE 237
            DG  GF  +A A+G  +E W +V+ D+L EL  +  EY ++F         +H  ++   
Sbjct: 592  DGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWDEYAQLFRDPIRVDELIHXLEHFQ- 650

Query: 236  NLSKSGTDEFMKMPEAGYLAASKYHTAVVFFSEAKSVTFLPLRSA-IPKNGLKVISIGLV 60
              S +  D +M MP+ G++ AS+Y+  +V+ S    +TFLPLRSA  P    +V+SIG +
Sbjct: 651  --SPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRRVLSIGFI 708

Query: 59   -ENKMLKLKLKTNCPMPEIA 3
             +N  +++ + T  PMP +A
Sbjct: 709  NDNHFVEILMTTGAPMPPVA 728


>emb|CBI37809.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
 Frame = -3

Query: 392 DGIGGFMALALALGYRKENWIKVQTDLLVELSCFKQEYVKMFS--------VHGFKNCGE 237
           DG  GF  +A A+G  +E W +V+ D+L EL  +  EY ++F         +H  ++   
Sbjct: 494 DGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWAEYAQLFRDPIRVDELIHVLEHFQ- 552

Query: 236 NLSKSGTDEFMKMPEAGYLAASKYHTAVVFFSEAKSVTFLPLRSA-IPKNGLKVISIGLV 60
             S +  D +M MP+ G++ AS+Y+  +V+ S    +TFLPLRSA  P    +V+SIG +
Sbjct: 553 --SPADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRRVLSIGFI 610

Query: 59  ENKMLKLKLKTNCP 18
            +       KT  P
Sbjct: 611 NDNHFVETWKTKTP 624


>gb|AFK36768.1| unknown [Lotus japonicus]
          Length = 179

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
 Frame = -3

Query: 392 DGIGGFMALALALGYRKENWIKVQTDLLVELSCFKQEYVKMFSVHGFKNCGENLSKSGT- 216
           DG  GF ALA  LG  + NW +++ DL  EL  F  EYV ++     +   + L    T 
Sbjct: 54  DGNCGFRALAALLGQEEHNWAQIRIDLAKELQEFHHEYVALYG--SIERVNQLLDSLYTI 111

Query: 215 -------DEFMKMPEAGYLAASKYHTAVVFFSEAKSVTFLPLRS-AIPKNGLKVISIGLV 60
                  D++M +P+ GYL A+K+    +  S    +TF PLR    P    K+I++GLV
Sbjct: 112 PGMLVTPDKWMSLPDMGYLIATKFKLVFLVLSNCGCITFFPLRGHTSPMRNHKIIAVGLV 171

Query: 59  EN 54
            +
Sbjct: 172 NS 173


>gb|ACU01865.1| otubain [Glycine max]
          Length = 341

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
 Frame = -3

Query: 344 KENWIKVQTDLLVELSCFKQEYVKMFS-VHGFKNCG-----ENLSKSGTDEFMKMPEAGY 183
           +++W  V+  LL EL+ F ++Y+K+F  +  F+        + L+K  TD+++ +   GY
Sbjct: 191 EDSWSVVRNHLLKELAKFSEDYIKLFGGMERFEELRMSLLVDGLTKVTTDKWIDITNMGY 250

Query: 182 LAASKYHTAVVFFSEAKSVTFLPLRSAIPKNGL--KVISIGLV-ENKMLKLKLKTNCPMP 12
           + AS+Y+  VV  S+ +S+TF PLRS    N    ++I I  V +N  +++ LK  CP+P
Sbjct: 251 VIASRYNVIVVSLSKQQSMTFFPLRSQPLANSSLHRIICISHVYDNHFVEVYLKERCPLP 310

Query: 11  EIA 3
            +A
Sbjct: 311 SVA 313


>ref|XP_003536822.1| PREDICTED: uncharacterized protein LOC100800409 [Glycine max]
          Length = 877

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
 Frame = -3

Query: 395  GDGIGGFMALALALGYRKENWIKVQTDLLVELSCFKQEYVKMF-SVHGFKNCGENL---S 228
            GD   G+ A+A  LG  +E+W  V+ DL+ EL  ++  Y K+F S        ++L    
Sbjct: 698  GDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAKLFGSNDRVAELRQSLYVGK 757

Query: 227  KSGTDEFMKMPEAGYLAASKYHTAVVFFSEAKSVTFLPLRSAIP--KNGLKVISIGLVEN 54
            ++    +M +P+ GY+ AS+Y+  +V  S  + +TF PLR   P  ++  ++ISIG V  
Sbjct: 758  QASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRGRPPLSQSSYRLISIGFVHK 817

Query: 53   -KMLKLKLKTNCPMPEIA 3
               +++ LK +  +P  A
Sbjct: 818  CHFVQVVLKADSVLPPTA 835


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