BLASTX nr result

ID: Coptis24_contig00023425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023425
         (1353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83288.1| hypothetical protein VITISV_033233 [Vitis vinifera]   342   2e-91
ref|XP_002510348.1| DNA-3-methyladenine glycosylase, putative [R...   338   1e-90
emb|CBI19652.3| unnamed protein product [Vitis vinifera]              338   2e-90
ref|XP_002281773.1| PREDICTED: probable GMP synthase [glutamine-...   338   2e-90
ref|XP_002302474.1| predicted protein [Populus trichocarpa] gi|2...   330   7e-88

>emb|CAN83288.1| hypothetical protein VITISV_033233 [Vitis vinifera]
          Length = 335

 Score =  342 bits (876), Expect = 2e-91
 Identities = 171/247 (69%), Positives = 192/247 (77%), Gaps = 12/247 (4%)
 Frame = +1

Query: 445  GLKSGKVAPDGEEQLLERPIVIKRCDWITPNSDRLYTIFHDEEWGIPVHDDNKLFELLVL 624
            GLK  KV P G E      +  KRCDWITPNSD LYT FHDEEWG+PVHDD KLFELLVL
Sbjct: 93   GLKPVKVVPHGVE------VPAKRCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVL 146

Query: 625  STALAELSWPDILNQRDIFRKLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVE 804
            S ALAELSWP ILN+RDIFRKL DNFDP+S+AKF DK +  LKA+G  LLSEPKLRAV+E
Sbjct: 147  SQALAELSWPTILNKRDIFRKLFDNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIE 206

Query: 805  NAKQMLKV----------QQEFGSFSNYCWSFVNHKPIKKGYRYVRHVPVKTP-KAEAIS 951
            NA QMLKV           QEFGSFSNYCWSF+NHKP+K G+RY R VPVKT  +   IS
Sbjct: 207  NANQMLKVIKFITRCLWFSQEFGSFSNYCWSFINHKPMKNGFRYARQVPVKTQNQNNIIS 266

Query: 952  KDLMRRGFRCVGPTVVYSFMQAAGIVNDHLITCFRYQECISNVKKDTEAMTQETE-LAVT 1128
            KDLM+RGFRCVGPTV+YSFMQ AG+VNDHL+TCFR+QEC SN+KKD +A T+ETE L   
Sbjct: 267  KDLMQRGFRCVGPTVIYSFMQVAGLVNDHLLTCFRFQECNSNIKKDLQAKTEETEVLTNA 326

Query: 1129 LKKTCLS 1149
            L+  CLS
Sbjct: 327  LENNCLS 333


>ref|XP_002510348.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
            gi|223551049|gb|EEF52535.1| DNA-3-methyladenine
            glycosylase, putative [Ricinus communis]
          Length = 336

 Score =  338 bits (868), Expect = 1e-90
 Identities = 162/236 (68%), Positives = 191/236 (80%), Gaps = 6/236 (2%)
 Frame = +1

Query: 460  KVAPDGEEQLLERPIVIKRCDWITPNSDRLYTIFHDEEWGIPVHDDNKLFELLVLSTALA 639
            K+ P+G E   ++ + +KRCDWIT NSD LY  FHDEEWG+PVHDD KLFELLV S ALA
Sbjct: 100  KIVPEGAEFASKQDLPVKRCDWITSNSDSLYMSFHDEEWGVPVHDDTKLFELLVFSQALA 159

Query: 640  ELSWPDILNQRDI-----FRKLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVE 804
            E+SWP IL+ R+I     FRKL DNFDP+SVA+F +K +  LK NGN LLSEPKLRA+VE
Sbjct: 160  EMSWPTILHMRNIXXRNIFRKLFDNFDPSSVAQFTEKKLLSLKVNGNLLLSEPKLRAIVE 219

Query: 805  NAKQMLKVQQEFGSFSNYCWSFVNHKPIKKGYRYVRHVPVKTPKAEAISKDLMRRGFRCV 984
            NAK +LKVQQEFGSFSNYCW FVN+KP++ G+RY R +PVKTPKAE ISKDLM+RGFRCV
Sbjct: 220  NAKLLLKVQQEFGSFSNYCWRFVNNKPLRNGFRYARQIPVKTPKAEFISKDLMQRGFRCV 279

Query: 985  GPTVVYSFMQAAGIVNDHLITCFRYQECISNVKKDTEAMTQETE-LAVTLKKTCLS 1149
            GPTVVYSFMQ AGIVNDHL+TCFRYQECI+NVKK  +   +E+E +   L+ TCLS
Sbjct: 280  GPTVVYSFMQVAGIVNDHLLTCFRYQECIANVKKKCDPDVEESERVTKALENTCLS 335


>emb|CBI19652.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  338 bits (867), Expect = 2e-90
 Identities = 166/236 (70%), Positives = 186/236 (78%), Gaps = 1/236 (0%)
 Frame = +1

Query: 445  GLKSGKVAPDGEEQLLERPIVIKRCDWITPNSDRLYTIFHDEEWGIPVHDDNKLFELLVL 624
            GLK  KV P G E      +  KRCDWITPNSD LYT FHDEEWG+PVHDD KLFELLVL
Sbjct: 93   GLKPVKVVPHGVE------VPAKRCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVL 146

Query: 625  STALAELSWPDILNQRDIFRKLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVE 804
            S ALAELSWP ILN+RDIFRKL DNFDP+S+AKF DK +  LKA+G  LLSEPKLRAV+E
Sbjct: 147  SQALAELSWPTILNKRDIFRKLFDNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIE 206

Query: 805  NAKQMLKVQQEFGSFSNYCWSFVNHKPIKKGYRYVRHVPVKTPKAEAISKDLMRRGFRCV 984
            NA QMLKVQQEFGSFSNYCWSF+NHKP+K G+RY R VPVKT           +RGFRCV
Sbjct: 207  NANQMLKVQQEFGSFSNYCWSFINHKPMKNGFRYARQVPVKT-----------QRGFRCV 255

Query: 985  GPTVVYSFMQAAGIVNDHLITCFRYQECISNVKKDTEAMTQETE-LAVTLKKTCLS 1149
            GPTV+YSFMQ AG+VNDHL+TCFR+QEC SN+KKD +A T+ETE L   L+  CLS
Sbjct: 256  GPTVIYSFMQVAGLVNDHLLTCFRFQECNSNIKKDLQAKTEETEVLTNALENNCLS 311


>ref|XP_002281773.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like [Vitis
            vinifera]
          Length = 315

 Score =  338 bits (867), Expect = 2e-90
 Identities = 166/236 (70%), Positives = 186/236 (78%), Gaps = 1/236 (0%)
 Frame = +1

Query: 445  GLKSGKVAPDGEEQLLERPIVIKRCDWITPNSDRLYTIFHDEEWGIPVHDDNKLFELLVL 624
            GLK  KV P G E      +  KRCDWITPNSD LYT FHDEEWG+PVHDD KLFELLVL
Sbjct: 95   GLKPVKVVPHGVE------VPAKRCDWITPNSDPLYTSFHDEEWGVPVHDDKKLFELLVL 148

Query: 625  STALAELSWPDILNQRDIFRKLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVE 804
            S ALAELSWP ILN+RDIFRKL DNFDP+S+AKF DK +  LKA+G  LLSEPKLRAV+E
Sbjct: 149  SQALAELSWPTILNKRDIFRKLFDNFDPSSIAKFTDKKLLSLKASGGTLLSEPKLRAVIE 208

Query: 805  NAKQMLKVQQEFGSFSNYCWSFVNHKPIKKGYRYVRHVPVKTPKAEAISKDLMRRGFRCV 984
            NA QMLKVQQEFGSFSNYCWSF+NHKP+K G+RY R VPVKT           +RGFRCV
Sbjct: 209  NANQMLKVQQEFGSFSNYCWSFINHKPMKNGFRYARQVPVKT-----------QRGFRCV 257

Query: 985  GPTVVYSFMQAAGIVNDHLITCFRYQECISNVKKDTEAMTQETE-LAVTLKKTCLS 1149
            GPTV+YSFMQ AG+VNDHL+TCFR+QEC SN+KKD +A T+ETE L   L+  CLS
Sbjct: 258  GPTVIYSFMQVAGLVNDHLLTCFRFQECNSNIKKDLQAKTEETEVLTNALENNCLS 313


>ref|XP_002302474.1| predicted protein [Populus trichocarpa] gi|222844200|gb|EEE81747.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  330 bits (845), Expect = 7e-88
 Identities = 159/220 (72%), Positives = 180/220 (81%), Gaps = 1/220 (0%)
 Frame = +1

Query: 493  ERPIVIKRCDWITPNSDRLYTIFHDEEWGIPVHDDNKLFELLVLSTALAELSWPDILNQR 672
            ERP+  KRCDWITPNSD LY  FHDEEWG+PV+DD KLFELLV S ALAELSWP IL+ R
Sbjct: 60   ERPV--KRCDWITPNSDPLYMSFHDEEWGVPVYDDRKLFELLVYSQALAELSWPAILHMR 117

Query: 673  DIFRKLLDNFDPASVAKFNDKNIQLLKANGNPLLSEPKLRAVVENAKQMLKVQQEFGSFS 852
            DIF KL DNFDP+S+A+F +K +  L+ NGN LLSEPKLRAVVENAKQMLK+QQEFGSFS
Sbjct: 118  DIFWKLFDNFDPSSIAQFTEKKLLSLRFNGNLLLSEPKLRAVVENAKQMLKIQQEFGSFS 177

Query: 853  NYCWSFVNHKPIKKGYRYVRHVPVKTPKAEAISKDLMRRGFRCVGPTVVYSFMQAAGIVN 1032
            NYCW FVN KP++ G+RY R VPVKTPKAE ISKDLM+RGFRCVGPT VYSFMQ AG VN
Sbjct: 178  NYCWRFVNQKPLRNGFRYARQVPVKTPKAELISKDLMQRGFRCVGPTAVYSFMQVAGFVN 237

Query: 1033 DHLITCFRYQECISNVKKDTEAMTQETELAV-TLKKTCLS 1149
            DHL  CFRYQEC  +VKKD +  ++ETE+    L  TC+S
Sbjct: 238  DHLKACFRYQECNVDVKKDFKPKSEETEMVTKALGNTCVS 277


Top