BLASTX nr result

ID: Coptis24_contig00023421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023421
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541974.1| PREDICTED: protein HIRA-like [Glycine max]        235   3e-60
ref|XP_003540239.1| PREDICTED: protein HIRA-like [Glycine max]        234   5e-60
ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera] gi|...   234   6e-60
ref|XP_004173102.1| PREDICTED: protein HIRA-like, partial [Cucum...   233   1e-59
ref|XP_004149254.1| PREDICTED: protein HIRA-like [Cucumis sativus]    233   1e-59

>ref|XP_003541974.1| PREDICTED: protein HIRA-like [Glycine max]
          Length = 1047

 Score =  235 bits (599), Expect = 3e-60
 Identities = 107/128 (83%), Positives = 120/128 (93%)
 Frame = -2

Query: 384 MIAEKPIWVRHEGLQIFSIDIQSGGLRFATGGGDHKVRIWNMICVGKESESEQSTQRVLA 205
           MIAEKP WVRHEG+QIFSID+Q GGLRFATGGGDHKVRIWNM  V  + E++ S+QR+LA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSTDLENDDSSQRLLA 60

Query: 204 TLRDHFGSVNCVRWAKHGRYLASGSDDQMILIHERKPGTGTTEFGSGDPPDVENWKVAMT 25
           TLRDHFGSVNCVRWAKHGRY+ASGSDDQ+ILIHERKPG+GTTEFGSG+PPD+ENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGSGTTEFGSGEPPDIENWKVAMT 120

Query: 24  LRGHSADV 1
           LRGH+ADV
Sbjct: 121 LRGHTADV 128


>ref|XP_003540239.1| PREDICTED: protein HIRA-like [Glycine max]
          Length = 1031

 Score =  234 bits (598), Expect = 5e-60
 Identities = 107/128 (83%), Positives = 120/128 (93%)
 Frame = -2

Query: 384 MIAEKPIWVRHEGLQIFSIDIQSGGLRFATGGGDHKVRIWNMICVGKESESEQSTQRVLA 205
           MIAEKP WVRHEG+QIFSID+Q GGLRFATGGGDHKVRIWNM  V  + E++ S+QR+LA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSTDIENDASSQRLLA 60

Query: 204 TLRDHFGSVNCVRWAKHGRYLASGSDDQMILIHERKPGTGTTEFGSGDPPDVENWKVAMT 25
           TLRDHFGSVNCVRWAKHGRY+ASGSDDQ+ILIHERKPG+GTTEFGSG+PPD+ENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPGSGTTEFGSGEPPDIENWKVAMT 120

Query: 24  LRGHSADV 1
           LRGH+ADV
Sbjct: 121 LRGHTADV 128


>ref|XP_002263076.1| PREDICTED: protein HIRA [Vitis vinifera]
           gi|296084943|emb|CBI28352.3| unnamed protein product
           [Vitis vinifera]
          Length = 1036

 Score =  234 bits (597), Expect = 6e-60
 Identities = 107/128 (83%), Positives = 120/128 (93%)
 Frame = -2

Query: 384 MIAEKPIWVRHEGLQIFSIDIQSGGLRFATGGGDHKVRIWNMICVGKESESEQSTQRVLA 205
           MIAEKP W+RHEG+QIFSIDIQ GGLRFATGGGDHKVRIWNM  VG++ E+++S  R+LA
Sbjct: 1   MIAEKPSWIRHEGMQIFSIDIQPGGLRFATGGGDHKVRIWNMKSVGRDLENDESVHRLLA 60

Query: 204 TLRDHFGSVNCVRWAKHGRYLASGSDDQMILIHERKPGTGTTEFGSGDPPDVENWKVAMT 25
           TLRDHFGSVNCVRWAKHGRY+ASGSDDQ+ILIHE KPG+GTTEFGSG+PPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHEWKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 24  LRGHSADV 1
           LRGH+ADV
Sbjct: 121 LRGHTADV 128


>ref|XP_004173102.1| PREDICTED: protein HIRA-like, partial [Cucumis sativus]
          Length = 837

 Score =  233 bits (595), Expect = 1e-59
 Identities = 106/128 (82%), Positives = 118/128 (92%)
 Frame = -2

Query: 384 MIAEKPIWVRHEGLQIFSIDIQSGGLRFATGGGDHKVRIWNMICVGKESESEQSTQRVLA 205
           MIAEKP WVRHEG+QIFSID+Q GGLRFATGGGDHKVRIWN+  VG+  E + S QR+LA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 204 TLRDHFGSVNCVRWAKHGRYLASGSDDQMILIHERKPGTGTTEFGSGDPPDVENWKVAMT 25
           TLRDHFGSVNCVRWAKHGRY+ASGSDDQ IL+HE+KPG+GTTEFGSG+PPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 24  LRGHSADV 1
           LRGH+ADV
Sbjct: 121 LRGHTADV 128


>ref|XP_004149254.1| PREDICTED: protein HIRA-like [Cucumis sativus]
          Length = 1033

 Score =  233 bits (595), Expect = 1e-59
 Identities = 106/128 (82%), Positives = 118/128 (92%)
 Frame = -2

Query: 384 MIAEKPIWVRHEGLQIFSIDIQSGGLRFATGGGDHKVRIWNMICVGKESESEQSTQRVLA 205
           MIAEKP WVRHEG+QIFSID+Q GGLRFATGGGDHKVRIWN+  VG+  E + S QR+LA
Sbjct: 1   MIAEKPSWVRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNVKSVGRSLEDDDSNQRLLA 60

Query: 204 TLRDHFGSVNCVRWAKHGRYLASGSDDQMILIHERKPGTGTTEFGSGDPPDVENWKVAMT 25
           TLRDHFGSVNCVRWAKHGRY+ASGSDDQ IL+HE+KPG+GTTEFGSG+PPDVENWKVAMT
Sbjct: 61  TLRDHFGSVNCVRWAKHGRYVASGSDDQTILVHEKKPGSGTTEFGSGEPPDVENWKVAMT 120

Query: 24  LRGHSADV 1
           LRGH+ADV
Sbjct: 121 LRGHTADV 128


Top