BLASTX nr result

ID: Coptis24_contig00023419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023419
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248...   200   9e-50
ref|XP_002512902.1| amino acid binding protein, putative [Ricinu...   193   1e-47
ref|XP_002336061.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_002298641.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818...   179   2e-43

>ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
           gi|296082319|emb|CBI21324.3| unnamed protein product
           [Vitis vinifera]
          Length = 440

 Score =  200 bits (509), Expect = 9e-50
 Identities = 97/117 (82%), Positives = 106/117 (90%)
 Frame = +3

Query: 3   RSSVGVMPSKEHTSIELIGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTE 182
           R +VGVMPS++HTSIEL GTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVT+
Sbjct: 105 RGTVGVMPSEDHTSIELSGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTD 164

Query: 183 ESTGCAIEDSKRLSSIRELLRYVLKGNNDLTTAKMVISPPGVLHKERRLHQMMFADR 353
           +STGCAIED  RLS I+ELL  VLKGNNDL TAKM +SPPG  H+ERRLHQ+MFADR
Sbjct: 165 DSTGCAIEDPNRLSKIKELLCNVLKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADR 221


>ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
           gi|223547913|gb|EEF49405.1| amino acid binding protein,
           putative [Ricinus communis]
          Length = 443

 Score =  193 bits (490), Expect = 1e-47
 Identities = 93/117 (79%), Positives = 105/117 (89%)
 Frame = +3

Query: 3   RSSVGVMPSKEHTSIELIGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTE 182
           R SVGVMPS++HTSIEL G DRPGLLSEVCAVLADL CNVVNAEIWTHNARAAAVVHVT+
Sbjct: 105 RGSVGVMPSEDHTSIELSGNDRPGLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTD 164

Query: 183 ESTGCAIEDSKRLSSIRELLRYVLKGNNDLTTAKMVISPPGVLHKERRLHQMMFADR 353
           +STGCA++D KRLS+I+ELL  VLKGNNDL  AKM +SPPG+  +ERRLHQ+MFADR
Sbjct: 165 DSTGCAVKDPKRLSTIKELLCNVLKGNNDLKAAKMTLSPPGITSRERRLHQIMFADR 221


>ref|XP_002336061.1| predicted protein [Populus trichocarpa] gi|222869846|gb|EEF06977.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/117 (79%), Positives = 103/117 (88%)
 Frame = +3

Query: 3   RSSVGVMPSKEHTSIELIGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTE 182
           R SVGVMPS+EHT+IEL GTDRPGLLSEVCAVL DLHCNVVNAEIWTHN RAAAVVHVT+
Sbjct: 105 RGSVGVMPSEEHTAIELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTD 164

Query: 183 ESTGCAIEDSKRLSSIRELLRYVLKGNNDLTTAKMVISPPGVLHKERRLHQMMFADR 353
           +STGCAI+D KRLS+IRELL  VLKGN+D  TA   +SPPGV  +ERRLHQ+MFADR
Sbjct: 165 DSTGCAIKDPKRLSTIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADR 221


>ref|XP_002298641.1| predicted protein [Populus trichocarpa] gi|222845899|gb|EEE83446.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  190 bits (483), Expect = 9e-47
 Identities = 93/117 (79%), Positives = 103/117 (88%)
 Frame = +3

Query: 3   RSSVGVMPSKEHTSIELIGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTE 182
           R SVGVMPS+EHT+IEL GTDRPGLLSEVCAVL DLHCNVVNAEIWTHN RAAAVVHVT+
Sbjct: 107 RGSVGVMPSEEHTAIELTGTDRPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTD 166

Query: 183 ESTGCAIEDSKRLSSIRELLRYVLKGNNDLTTAKMVISPPGVLHKERRLHQMMFADR 353
           +STGCAI+D KRLS+IRELL  VLKGN+D  TA   +SPPGV  +ERRLHQ+MFADR
Sbjct: 167 DSTGCAIKDPKRLSTIRELLCNVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADR 223


>ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
          Length = 445

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/117 (71%), Positives = 102/117 (87%)
 Frame = +3

Query: 3   RSSVGVMPSKEHTSIELIGTDRPGLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTE 182
           R SVGV+P++EHT IEL GTDRPGLLSE+CAVL DLHCNVV AEIWTHN RAAAVVHVT+
Sbjct: 105 RESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTD 164

Query: 183 ESTGCAIEDSKRLSSIRELLRYVLKGNNDLTTAKMVISPPGVLHKERRLHQMMFADR 353
           +S+GCAI+D  RLS+IR+LL  VL+G+ND  TA+  +SPPGV +++RRLHQ+MFADR
Sbjct: 165 DSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADR 221


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