BLASTX nr result
ID: Coptis24_contig00023416
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023416 (302 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group] 80 2e-13 gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e... 79 5e-13 gb|AAG13430.1|AC051634_11 putative plant disease resistance poly... 77 1e-12 gb|AAP54661.2| retrotransposon protein, putative, unclassified [... 77 1e-12 gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyp... 77 1e-12 >emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group] Length = 1817 Score = 79.7 bits (195), Expect = 2e-13 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 2/101 (1%) Frame = -2 Query: 301 ADVLSRVVE--EHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYT 128 AD LSR + E C IS P W+QEVT Y DS QL+ +L V P+ K++S Sbjct: 1202 ADALSRKFQHDEEELCH-ISACTPTWLQEVTTGYASDSYSSQLLTELTVQPNARKHFSLH 1260 Query: 127 AGLVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5 AGL++YKGR++IG+N L KLL V S+ + HSG +Y Sbjct: 1261 AGLLKYKGRIWIGNNRQLQLKLLTEVHSNPIGGHSGFPVTY 1301 >gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis] Length = 592 Score = 78.6 bits (192), Expect = 5e-13 Identities = 44/98 (44%), Positives = 57/98 (58%) Frame = -2 Query: 298 DVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAGL 119 D LSRV + IS V P W+ EV SY+ D + LI Q+ + P NYS G+ Sbjct: 227 DALSRV-RYNDQVVAISAVTPVWILEVLASYEGDEKCRDLITQISISPTAQPNYSLKNGI 285 Query: 118 VRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5 +RYKGRLYIGSN L R+LL T S++ HSG + +Y Sbjct: 286 LRYKGRLYIGSNTGLKRQLLVTFHDSALGGHSGGRVTY 323 >gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa Japonica Group] Length = 921 Score = 77.4 bits (189), Expect = 1e-12 Identities = 42/99 (42%), Positives = 59/99 (59%) Frame = -2 Query: 301 ADVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAG 122 AD LSR+ C L S VQP W+QEV SY D QQL+A+L V + YS T G Sbjct: 403 ADALSRMPSSSQFCAL-SVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQG 461 Query: 121 LVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5 ++R++ +++IGSN L KL+ +S++ HSGI +Y Sbjct: 462 IIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATY 500 >gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 760 Score = 77.4 bits (189), Expect = 1e-12 Identities = 42/99 (42%), Positives = 59/99 (59%) Frame = -2 Query: 301 ADVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAG 122 AD LSR+ C L S VQP W+QEV SY D QQL+A+L V + YS T G Sbjct: 242 ADALSRMPSSSQFCAL-SVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQG 300 Query: 121 LVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5 ++R++ +++IGSN L KL+ +S++ HSGI +Y Sbjct: 301 IIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATY 339 >gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyprotein [Oryza sativa Japonica Group] gi|108706266|gb|ABF94061.1| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] Length = 1159 Score = 77.4 bits (189), Expect = 1e-12 Identities = 42/99 (42%), Positives = 59/99 (59%) Frame = -2 Query: 301 ADVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAG 122 AD LSR+ C L S VQP W+QEV SY D QQL+A+L V + YS T G Sbjct: 203 ADALSRMPSSSQFCAL-SVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQG 261 Query: 121 LVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5 ++R++ +++IGSN L KL+ +S++ HSGI +Y Sbjct: 262 IIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATY 300