BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023416
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]         80   2e-13
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...    79   5e-13
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly...    77   1e-12
gb|AAP54661.2| retrotransposon protein, putative, unclassified [...    77   1e-12
gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyp...    77   1e-12

>emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
          Length = 1817

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
 Frame = -2

Query: 301  ADVLSRVVE--EHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYT 128
            AD LSR  +  E   C  IS   P W+QEVT  Y  DS   QL+ +L V P+  K++S  
Sbjct: 1202 ADALSRKFQHDEEELCH-ISACTPTWLQEVTTGYASDSYSSQLLTELTVQPNARKHFSLH 1260

Query: 127  AGLVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5
            AGL++YKGR++IG+N  L  KLL  V S+ +  HSG   +Y
Sbjct: 1261 AGLLKYKGRIWIGNNRQLQLKLLTEVHSNPIGGHSGFPVTY 1301


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 44/98 (44%), Positives = 57/98 (58%)
 Frame = -2

Query: 298 DVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAGL 119
           D LSRV   +     IS V P W+ EV  SY+ D   + LI Q+ + P    NYS   G+
Sbjct: 227 DALSRV-RYNDQVVAISAVTPVWILEVLASYEGDEKCRDLITQISISPTAQPNYSLKNGI 285

Query: 118 VRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5
           +RYKGRLYIGSN  L R+LL T   S++  HSG + +Y
Sbjct: 286 LRYKGRLYIGSNTGLKRQLLVTFHDSALGGHSGGRVTY 323


>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group]
          Length = 921

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/99 (42%), Positives = 59/99 (59%)
 Frame = -2

Query: 301 ADVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAG 122
           AD LSR+      C L S VQP W+QEV  SY  D   QQL+A+L V     + YS T G
Sbjct: 403 ADALSRMPSSSQFCAL-SVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQG 461

Query: 121 LVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5
           ++R++ +++IGSN  L  KL+    +S++  HSGI  +Y
Sbjct: 462 IIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATY 500


>gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 760

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/99 (42%), Positives = 59/99 (59%)
 Frame = -2

Query: 301 ADVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAG 122
           AD LSR+      C L S VQP W+QEV  SY  D   QQL+A+L V     + YS T G
Sbjct: 242 ADALSRMPSSSQFCAL-SVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQG 300

Query: 121 LVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5
           ++R++ +++IGSN  L  KL+    +S++  HSGI  +Y
Sbjct: 301 IIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATY 339


>gb|AAM51835.1|AC105730_9 Putative plant disease resistance polyprotein [Oryza sativa
           Japonica Group] gi|108706266|gb|ABF94061.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1159

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/99 (42%), Positives = 59/99 (59%)
 Frame = -2

Query: 301 ADVLSRVVEEHGSCQLISTVQPQWMQEVTLSYDQDSVIQQLIAQLLVVPDGIKNYSYTAG 122
           AD LSR+      C L S VQP W+QEV  SY  D   QQL+A+L V     + YS T G
Sbjct: 203 ADALSRMPSSSQFCAL-SVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQG 261

Query: 121 LVRYKGRLYIGSNNDLCRKLLATVDSSSMARHSGIQGSY 5
           ++R++ +++IGSN  L  KL+    +S++  HSGI  +Y
Sbjct: 262 IIRFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATY 300