BLASTX nr result

ID: Coptis24_contig00023415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023415
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71927.1| hypothetical protein VITISV_002309 [Vitis vinifera]   151   1e-34
ref|XP_002277853.2| PREDICTED: probable disease resistance prote...   148   1e-33
ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
ref|XP_003632789.1| PREDICTED: uncharacterized protein LOC100855...   140   4e-31
emb|CAN60664.1| hypothetical protein VITISV_007188 [Vitis vinifera]   133   5e-29

>emb|CAN71927.1| hypothetical protein VITISV_002309 [Vitis vinifera]
          Length = 1107

 Score =  151 bits (382), Expect = 1e-34
 Identities = 91/219 (41%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
 Frame = -3

Query: 646  HRHAKNLPCRSNVRMVSVNP-TLHVLGLNSWNVNRKEQR---NCGLLRSSWFSCGFCTSV 479
            H   K L CR +    S +  T+      S   N K+ R         S WFS G  +S+
Sbjct: 426  HLSKKYLQCRMDKNFESEDRRTVRSNAPYSSKFNGKKNRILFTYSTYSSRWFSSGVPSSM 485

Query: 478  SSSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAIKHRDSVRSCPEL 299
             SS  SD  N +NV    KA +  ++++ ++ L  VLH+SARSFS  ++  +  R  PEL
Sbjct: 486  VSSAYSDQTNNKNVPPPVKAISTKMEFNRVNCLVWVLHESARSFSHTVESFELARCGPEL 545

Query: 298  AKAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVHDIISPKISMLLE 119
            A AWVGVDVHAWHK IA+QVAVY +L+T  E ++  S    N  S V +I+SP I+ + +
Sbjct: 546  AMAWVGVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCNNPSLVREILSPIINSIEQ 605

Query: 118  FIETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAE 2
             IE+QL  R+  LV+WF++V+LP + G FIP+L++WS E
Sbjct: 606  NIESQLKARHPKLVEWFRMVELPRIAGFFIPLLKKWSME 644


>ref|XP_002277853.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis
            vinifera]
          Length = 1639

 Score =  148 bits (374), Expect = 1e-33
 Identities = 79/171 (46%), Positives = 112/171 (65%)
 Frame = -3

Query: 514  SSWFSCGFCTSVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAI 335
            S WFS G  +S+ SS  SD  N E V    KA +  ++++ ++ L  VLH+SARSFS  +
Sbjct: 1007 SMWFSSGVPSSMVSSAYSDQTNNEKVPPQVKAISTKMEFNRVNCLVWVLHESARSFSHTV 1066

Query: 334  KHRDSVRSCPELAKAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVH 155
            +     RS PELA AWV VDVHAWHK IA+QVAVY +L+T  E ++  S    N  S V 
Sbjct: 1067 ESFKLARSRPELAMAWVAVDVHAWHKRIAHQVAVYALLRTAIELEFILSHGRCNSPSLVR 1126

Query: 154  DIISPKISMLLEFIETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAE 2
            +I+SP I+ + + IE++L  R+  LV+WF++V+LP + G FIP+L++WS E
Sbjct: 1127 EILSPMINSVKQNIESRLKTRHPKLVEWFRMVELPRIAGFFIPLLKKWSME 1177


>ref|XP_002299726.1| predicted protein [Populus trichocarpa] gi|222846984|gb|EEE84531.1|
           predicted protein [Populus trichocarpa]
          Length = 706

 Score =  140 bits (354), Expect = 2e-31
 Identities = 78/173 (45%), Positives = 110/173 (63%), Gaps = 2/173 (1%)
 Frame = -3

Query: 514 SSWFSCGFCTSVSSSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAI 335
           S + S    +S+SSS  +  IN  N  +V + D+ +++   ++ L  VLH+SA SFS A+
Sbjct: 63  SRYISLKVLSSMSSSASTGEINDVNEAVVSRPDDKNMELTRINCLVWVLHESATSFSQAV 122

Query: 334 KHRDSVRSCPELAKAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVH 155
           +  +   S PELA AW G DVH WHK +AYQVAVY +LKT  E +   S +  N  SPV 
Sbjct: 123 ESLELAGSGPELAMAWNGKDVHIWHKRLAYQVAVYALLKTAIEVEILLSHDRHNP-SPVK 181

Query: 154 DIIS--PKISMLLEFIETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAE 2
           ++ S  PKI++L E+IE QL M++  LV+WFK+V+LP + G F P L+QWS E
Sbjct: 182 EMSSFTPKINLLGEYIENQLNMKHPELVQWFKVVELPHIAGFFAPSLKQWSVE 234


>ref|XP_003632789.1| PREDICTED: uncharacterized protein LOC100855084 [Vitis vinifera]
          Length = 323

 Score =  140 bits (352), Expect = 4e-31
 Identities = 74/158 (46%), Positives = 106/158 (67%)
 Frame = -3

Query: 475 SSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAIKHRDSVRSCPELA 296
           SS  SD  N +NV    KA +  ++++ ++ L  VLH+SARSFS  ++  +  R  PELA
Sbjct: 3   SSAYSDQTNNKNVPPPVKAISTKMEFNRVNCLVWVLHESARSFSHTVESFELARCGPELA 62

Query: 295 KAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVHDIISPKISMLLEF 116
            AWVGVDVHAWHK IA+QVAVY +L+T  E ++  S    N  S V +I+SP I+ + + 
Sbjct: 63  MAWVGVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCNNPSLVREILSPIINSIEQN 122

Query: 115 IETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAE 2
           IE+QL  R+  LV+WF++V+LP + G FIP+L++WS E
Sbjct: 123 IESQLKARHPKLVEWFRMVELPRIAGFFIPLLKKWSME 160


>emb|CAN60664.1| hypothetical protein VITISV_007188 [Vitis vinifera]
          Length = 479

 Score =  133 bits (334), Expect = 5e-29
 Identities = 72/158 (45%), Positives = 104/158 (65%)
 Frame = -3

Query: 475 SSVVSDHINVENVLIVDKADNIDVKYDHLDGLARVLHKSARSFSVAIKHRDSVRSCPELA 296
           SS  SD  N E V  + KA +  ++++ ++ L  VLH+SARSFS  ++     RS PELA
Sbjct: 3   SSTYSDQTNNEKVPPLVKAISTKMEFNRVNCLVWVLHESARSFSHTVESFKLARSRPELA 62

Query: 295 KAWVGVDVHAWHKHIAYQVAVYTMLKTITEGKYTHSDEHMNEFSPVHDIISPKISMLLEF 116
            AWV VDVHAWHK IA+QVAVY +L+T  E ++  S    N  S V +I+SP I+ + + 
Sbjct: 63  MAWVAVDVHAWHKRIAHQVAVYALLRTAIELEFFLSHGRCNSPSLVREILSPMINSVKQN 122

Query: 115 IETQLAMRNHNLVKWFKIVKLPLLTGLFIPVLRQWSAE 2
           IE++L  R+  LV+WF++V+LP + G FIP+L++ S E
Sbjct: 123 IESRLKTRHPKLVEWFRMVELPRIAGFFIPLLKKCSME 160