BLASTX nr result
ID: Coptis24_contig00023413
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023413 (1114 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit ... 359 e-124 ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit ... 359 e-124 ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana] ... 350 e-119 ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arab... 350 e-119 ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit ... 339 e-117 >ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis sativus] Length = 615 Score = 359 bits (921), Expect(3) = e-124 Identities = 177/226 (78%), Positives = 201/226 (88%) Frame = +3 Query: 372 AYDSISAFSTRKDNQDAVFGAEEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 551 AYDSISAFS+R+DNQDA+FG EEGLK+IR+AT+ YK E L+LQ+QL LQSQ+D+LT QA Sbjct: 78 AYDSISAFSSRRDNQDALFGGEEGLKEIREATVAYKSEALQLQRQLSHLQSQYDMLTSQA 137 Query: 552 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 731 STL QGRRARVAATS+VNGQLT +DD +SARNLE NAVLGRIASTAQEL+H+HSGDEDGI Sbjct: 138 STLTQGRRARVAATSSVNGQLTSIDDSISARNLEMNAVLGRIASTAQELAHYHSGDEDGI 197 Query: 732 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVAEEGKAKCSWMSLDDSSNCLVQD 911 YL YSDFH YL+GDS+C KELNQWF KQ +TGP+RLVAEEGK+KCSW+SLDD SN LV+D Sbjct: 198 YLAYSDFHPYLVGDSSCIKELNQWFSKQLDTGPYRLVAEEGKSKCSWVSLDDMSNILVRD 257 Query: 912 SEKSHHQRVTGLHRLRSIFGTSERQWVEAQVENAKQQAMLAALKFQ 1049 E SHHQRV+ L RLRSIFGTSERQWVEAQVENAKQQA+L LK Q Sbjct: 258 LETSHHQRVSELQRLRSIFGTSERQWVEAQVENAKQQAILMVLKSQ 303 Score = 102 bits (254), Expect(3) = e-124 Identities = 49/77 (63%), Positives = 58/77 (75%) Frame = +2 Query: 74 GAKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQ 253 GA+LC + LDPDSFEWPFQY++AR +LDWI SSLR +NVLS SELS + Q Sbjct: 3 GARLCGLLGELGYEGAQALDPDSFEWPFQYDDARSILDWICSSLRPSNVLSHSELSQYGQ 62 Query: 254 FLQEGKLLEGDDLDFAY 304 FL+EGKLLEG+DLD AY Sbjct: 63 FLEEGKLLEGEDLDSAY 79 Score = 34.7 bits (78), Expect(3) = e-124 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 Query: 1042 SSKRKHSELAGELSHLY*KVDKML 1113 S +RKHSEL GELS+LY K +K+L Sbjct: 317 SLRRKHSELVGELSNLYDKEEKLL 340 >ref|XP_004163165.1| PREDICTED: HAUS augmin-like complex subunit 3-like, partial [Cucumis sativus] Length = 380 Score = 359 bits (921), Expect(3) = e-124 Identities = 177/226 (78%), Positives = 201/226 (88%) Frame = +3 Query: 372 AYDSISAFSTRKDNQDAVFGAEEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 551 AYDSISAFS+R+DNQDA+FG EEGLK+IR+AT+ YK E L+LQ+QL LQSQ+D+LT QA Sbjct: 78 AYDSISAFSSRRDNQDALFGGEEGLKEIREATVAYKSEALQLQRQLSHLQSQYDMLTSQA 137 Query: 552 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 731 STL QGRRARVAATS+VNGQLT +DD +SARNLE NAVLGRIASTAQEL+H+HSGDEDGI Sbjct: 138 STLTQGRRARVAATSSVNGQLTSIDDSISARNLEMNAVLGRIASTAQELAHYHSGDEDGI 197 Query: 732 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVAEEGKAKCSWMSLDDSSNCLVQD 911 YL YSDFH YL+GDS+C KELNQWF KQ +TGP+RLVAEEGK+KCSW+SLDD SN LV+D Sbjct: 198 YLAYSDFHPYLVGDSSCIKELNQWFSKQLDTGPYRLVAEEGKSKCSWVSLDDMSNILVRD 257 Query: 912 SEKSHHQRVTGLHRLRSIFGTSERQWVEAQVENAKQQAMLAALKFQ 1049 E SHHQRV+ L RLRSIFGTSERQWVEAQVENAKQQA+L LK Q Sbjct: 258 LETSHHQRVSELQRLRSIFGTSERQWVEAQVENAKQQAILMVLKSQ 303 Score = 102 bits (254), Expect(3) = e-124 Identities = 49/77 (63%), Positives = 58/77 (75%) Frame = +2 Query: 74 GAKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQ 253 GA+LC + LDPDSFEWPFQY++AR +LDWI SSLR +NVLS SELS + Q Sbjct: 3 GARLCGLLGELGYEGAQALDPDSFEWPFQYDDARSILDWICSSLRPSNVLSHSELSQYGQ 62 Query: 254 FLQEGKLLEGDDLDFAY 304 FL+EGKLLEG+DLD AY Sbjct: 63 FLEEGKLLEGEDLDSAY 79 Score = 34.7 bits (78), Expect(3) = e-124 Identities = 16/24 (66%), Positives = 20/24 (83%) Frame = +1 Query: 1042 SSKRKHSELAGELSHLY*KVDKML 1113 S +RKHSEL GELS+LY K +K+L Sbjct: 317 SLRRKHSELVGELSNLYDKEEKLL 340 >ref|NP_199663.2| uncharacterized protein [Arabidopsis thaliana] gi|110737416|dbj|BAF00652.1| hypothetical protein [Arabidopsis thaliana] gi|332008298|gb|AED95681.1| uncharacterized protein [Arabidopsis thaliana] Length = 617 Score = 350 bits (899), Expect(2) = e-119 Identities = 170/226 (75%), Positives = 203/226 (89%) Frame = +3 Query: 372 AYDSISAFSTRKDNQDAVFGAEEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 551 AYDSISAFS+R++NQ+AVFGAEE +K++RDATL +K E LELQ+QLR LQ+Q+DLLTGQ+ Sbjct: 78 AYDSISAFSSRRNNQEAVFGAEESIKEVRDATLAHKAEALELQRQLRRLQTQYDLLTGQS 137 Query: 552 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 731 S LIQGRRARVAATSAV+GQ+T ++D LSARNL+ N VLGR+AST+QEL+H+HSG+EDGI Sbjct: 138 SALIQGRRARVAATSAVSGQITAIEDSLSARNLQMNGVLGRLASTSQELAHYHSGEEDGI 197 Query: 732 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVAEEGKAKCSWMSLDDSSNCLVQD 911 YL YSDFH+YL GDSACTKELNQWF KQ +TGP+RLVAEEGK+KCSW+SLDD+SN +++D Sbjct: 198 YLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVAEEGKSKCSWVSLDDTSN-MLRD 256 Query: 912 SEKSHHQRVTGLHRLRSIFGTSERQWVEAQVENAKQQAMLAALKFQ 1049 EKS HQRV L RLRSIFGTSERQW+EAQVENAKQQA+L LK Q Sbjct: 257 LEKSQHQRVAELQRLRSIFGTSERQWIEAQVENAKQQAILLTLKSQ 302 Score = 106 bits (265), Expect(2) = e-119 Identities = 50/76 (65%), Positives = 61/76 (80%) Frame = +2 Query: 77 AKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQF 256 A+LC++ KLDPDSFEWPFQY++ARP+LDWI SSLR +NVLS +ELSL+EQF Sbjct: 4 ARLCSLVAELGYEGAGKLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLYEQF 63 Query: 257 LQEGKLLEGDDLDFAY 304 ++GKLLEGDDLD AY Sbjct: 64 QRDGKLLEGDDLDQAY 79 >ref|XP_002863902.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata] gi|297309737|gb|EFH40161.1| hypothetical protein ARALYDRAFT_494914 [Arabidopsis lyrata subsp. lyrata] Length = 617 Score = 350 bits (897), Expect(2) = e-119 Identities = 170/226 (75%), Positives = 203/226 (89%) Frame = +3 Query: 372 AYDSISAFSTRKDNQDAVFGAEEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 551 AYDSISAFS+R++NQ+AVFGAEE +K++RDATL +K E LELQ+QLR LQ+Q+DLLTGQ+ Sbjct: 78 AYDSISAFSSRRNNQEAVFGAEESIKEVRDATLAHKAEALELQRQLRRLQTQYDLLTGQS 137 Query: 552 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 731 S LIQGRRARVAATSAV+GQ+T ++D LSARNL+ N VLGR+AST+QEL+H+HSG+EDGI Sbjct: 138 SALIQGRRARVAATSAVSGQITSIEDSLSARNLQMNGVLGRLASTSQELAHYHSGEEDGI 197 Query: 732 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVAEEGKAKCSWMSLDDSSNCLVQD 911 YL YSDFH+YL GDSACTKELNQWF KQ +TGP+RLVAEEGK+KCSW+SLDD+SN +++D Sbjct: 198 YLAYSDFHAYLAGDSACTKELNQWFAKQLDTGPYRLVAEEGKSKCSWVSLDDTSN-MLRD 256 Query: 912 SEKSHHQRVTGLHRLRSIFGTSERQWVEAQVENAKQQAMLAALKFQ 1049 EKS HQRV L RLRSIFGTSERQW+EAQVENAKQQA+L LK Q Sbjct: 257 LEKSQHQRVAELQRLRSIFGTSERQWIEAQVENAKQQAILLTLKSQ 302 Score = 106 bits (265), Expect(2) = e-119 Identities = 50/76 (65%), Positives = 61/76 (80%) Frame = +2 Query: 77 AKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQF 256 A+LC++ KLDPDSFEWPFQY++ARP+LDWI SSLR +NVLS +ELSL+EQF Sbjct: 4 ARLCSLVAELGYEGAGKLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLAELSLYEQF 63 Query: 257 LQEGKLLEGDDLDFAY 304 ++GKLLEGDDLD AY Sbjct: 64 QRDGKLLEGDDLDQAY 79 >ref|XP_003549936.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Glycine max] Length = 618 Score = 339 bits (869), Expect(3) = e-117 Identities = 168/226 (74%), Positives = 192/226 (84%) Frame = +3 Query: 372 AYDSISAFSTRKDNQDAVFGAEEGLKDIRDATLQYKVEGLELQKQLRLLQSQFDLLTGQA 551 AYDSISAFS R+DNQ+AVFG EEGLKDI++ATL Y+ E L LQ+QLR LQSQFD+L+GQA Sbjct: 78 AYDSISAFSDRRDNQEAVFGTEEGLKDIKEATLAYREEALALQRQLRHLQSQFDMLSGQA 137 Query: 552 STLIQGRRARVAATSAVNGQLTVLDDDLSARNLETNAVLGRIASTAQELSHFHSGDEDGI 731 STL QGRRAR+AATS VNG L +DD LS RNL+ N VL RIASTA EL+H+HSGDED I Sbjct: 138 STLTQGRRARLAATSIVNGHLANIDDSLSVRNLQMNGVLERIASTAHELAHYHSGDEDDI 197 Query: 732 YLTYSDFHSYLLGDSACTKELNQWFVKQFETGPFRLVAEEGKAKCSWMSLDDSSNCLVQD 911 YL YSDF+ +LLGDS+C KELNQWF KQ +TGPFRLVAEEGK+KCSW++LDD SN V+D Sbjct: 198 YLAYSDFNQFLLGDSSCLKELNQWFAKQLDTGPFRLVAEEGKSKCSWVNLDDISNTYVRD 257 Query: 912 SEKSHHQRVTGLHRLRSIFGTSERQWVEAQVENAKQQAMLAALKFQ 1049 EKSHHQRV+ L RLRSIFG SE+QWVEAQVENAKQQA+L LK Q Sbjct: 258 LEKSHHQRVSELRRLRSIFGVSEKQWVEAQVENAKQQAILMTLKSQ 303 Score = 102 bits (253), Expect(3) = e-117 Identities = 48/77 (62%), Positives = 56/77 (72%) Frame = +2 Query: 74 GAKLCNVXXXXXXXXXXKLDPDSFEWPFQYEEARPLLDWISSSLRSANVLSPSELSLHEQ 253 G +LC + LDPDSFEWPFQYE+ RPLL WI S+LR +NVLS EL+ +EQ Sbjct: 3 GGRLCTLLGELGYEGWEALDPDSFEWPFQYEDTRPLLHWICSNLRPSNVLSLGELNQYEQ 62 Query: 254 FLQEGKLLEGDDLDFAY 304 F QEGKLLEG+DLDFAY Sbjct: 63 FKQEGKLLEGEDLDFAY 79 Score = 32.0 bits (71), Expect(3) = e-117 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +1 Query: 1042 SSKRKHSELAGELSHLY*KVDKML 1113 S +RKHSEL GELS+LY +K+L Sbjct: 317 SLRRKHSELKGELSNLYNHEEKLL 340