BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023411
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis...    70   2e-10
emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]    70   2e-10
ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like i...    60   2e-07
ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like i...    60   2e-07
ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [...    57   2e-06

>ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
           gi|297738532|emb|CBI27777.3| unnamed protein product
           [Vitis vinifera]
          Length = 493

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
 Frame = -1

Query: 215 MVGTPTYRRIH--HHRSETQ-WV--LISPKRTLLTLVWIVGFSLLFTWQRNTINGILLFR 51
           MV T ++ R H  HHR + + W+   +S  RTL T++WI  F+ +F WQRN + G+L FR
Sbjct: 1   MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFR 60

Query: 50  RNVPRVIPKLRPYVFN 3
           R   R +P+LRP V+N
Sbjct: 61  RAPARPLPRLRPAVYN 76


>emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis vinifera]
          Length = 509

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
 Frame = -1

Query: 215 MVGTPTYRRIH--HHRSETQ-WV--LISPKRTLLTLVWIVGFSLLFTWQRNTINGILLFR 51
           MV T ++ R H  HHR + + W+   +S  RTL T++WI  F+ +F WQRN + G+L FR
Sbjct: 1   MVETASFGRFHFNHHRPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFR 60

Query: 50  RNVPRVIPKLRPYVFN 3
           R   R +P+LRP V+N
Sbjct: 61  RAPARPLPRLRPAVYN 76


>ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
          Length = 491

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 IMVGTPTYRRIHHHRSETQ-WV--LISPKRTLLTLVWIVGFSLLFTWQRNTINGILLFRR 48
           +MV T T    HH R + + WV    +  +TLLTL+WI  F+ +F WQRN + G L++  
Sbjct: 1   MMVETSTLGHFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVYGG 60

Query: 47  NVPRVIPKLRPYVFN 3
              R +P LRP  FN
Sbjct: 61  IPGRPMPMLRPMAFN 75


>ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
          Length = 492

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = -1

Query: 218 IMVGTPTYRRIHHHRSETQ-WV--LISPKRTLLTLVWIVGFSLLFTWQRNTINGILLFRR 48
           +MV T T    HH R + + WV    +  +TLLTL+WI  F+ +F WQRN + G L++  
Sbjct: 1   MMVETSTLGHFHHQRLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVYGG 60

Query: 47  NVPRVIPKLRPYVFN 3
              R +P LRP  FN
Sbjct: 61  IPGRPMPMLRPMAFN 75


>ref|XP_003542367.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 491

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
 Frame = -1

Query: 215 MVGTPTYRRIHHHRSETQ-WV--LISPKRTLLTLVWIVGFSLLFTWQRNTINGILLFRRN 45
           MV   T  R HH R + + WV    +  +TLLT +WI  F+ +F WQRN   G L++   
Sbjct: 1   MVENSTLGRFHHQRLDLRRWVPAFFTSHKTLLTFLWIAAFASVFLWQRNIAGGFLVYGGI 60

Query: 44  VPRVIPKLRPYVFN 3
             R +P LRP  FN
Sbjct: 61  PARPMPMLRPMAFN 74