BLASTX nr result

ID: Coptis24_contig00023408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023408
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25411.3| unnamed protein product [Vitis vinifera]              213   2e-53
ref|XP_002278231.1| PREDICTED: uncharacterized protein LOC100253...   213   2e-53
emb|CAN64033.1| hypothetical protein VITISV_028159 [Vitis vinifera]   211   6e-53
ref|XP_002311251.1| predicted protein [Populus trichocarpa] gi|2...   207   1e-51
ref|XP_002520805.1| conserved hypothetical protein [Ricinus comm...   203   2e-50

>emb|CBI25411.3| unnamed protein product [Vitis vinifera]
          Length = 588

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/162 (66%), Positives = 131/162 (80%), Gaps = 4/162 (2%)
 Frame = -1

Query: 560 LNHRIAAVIIGGLKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTAL 381
           L+HR+A+V+ GG+KLA VGFISSIGAVA+SN LY  R++LNPAL+ NQ+NKRSPI KTA 
Sbjct: 428 LSHRVASVLFGGVKLASVGFISSIGAVAASNTLYAVRKILNPALIVNQQNKRSPIFKTAF 487

Query: 380 VYGSFLGTSANLRYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVA 201
           VYG FLG SANLRYQIIAG+VEHR SD   +SQPLLVN+LSF  RT+NSYWGTQQW+D+A
Sbjct: 488 VYGCFLGISANLRYQIIAGVVEHRFSDQ-FASQPLLVNMLSFFARTINSYWGTQQWVDLA 546

Query: 200 RYTGLQTQKSKATSDPPSETLNLSAL----TDEVSVDEMKNQ 87
           R+TGLQTQKS+  S    ++ N +AL     +E  +DE+KNQ
Sbjct: 547 RFTGLQTQKSEPPSYQTVDSSNHAALECSSAEETHIDEIKNQ 588


>ref|XP_002278231.1| PREDICTED: uncharacterized protein LOC100253544 [Vitis vinifera]
          Length = 749

 Score =  213 bits (541), Expect = 2e-53
 Identities = 107/162 (66%), Positives = 131/162 (80%), Gaps = 4/162 (2%)
 Frame = -1

Query: 560  LNHRIAAVIIGGLKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTAL 381
            L+HR+A+V+ GG+KLA VGFISSIGAVA+SN LY  R++LNPAL+ NQ+NKRSPI KTA 
Sbjct: 589  LSHRVASVLFGGVKLASVGFISSIGAVAASNTLYAVRKILNPALIVNQQNKRSPIFKTAF 648

Query: 380  VYGSFLGTSANLRYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVA 201
            VYG FLG SANLRYQIIAG+VEHR SD   +SQPLLVN+LSF  RT+NSYWGTQQW+D+A
Sbjct: 649  VYGCFLGISANLRYQIIAGVVEHRFSDQ-FASQPLLVNMLSFFARTINSYWGTQQWVDLA 707

Query: 200  RYTGLQTQKSKATSDPPSETLNLSAL----TDEVSVDEMKNQ 87
            R+TGLQTQKS+  S    ++ N +AL     +E  +DE+KNQ
Sbjct: 708  RFTGLQTQKSEPPSYQTVDSSNHAALECSSAEETHIDEIKNQ 749


>emb|CAN64033.1| hypothetical protein VITISV_028159 [Vitis vinifera]
          Length = 749

 Score =  211 bits (537), Expect = 6e-53
 Identities = 107/162 (66%), Positives = 130/162 (80%), Gaps = 4/162 (2%)
 Frame = -1

Query: 560  LNHRIAAVIIGGLKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTAL 381
            L+HR+A+V+ GG+KLA VGFISSIGAVA+SN LY  R++LNPAL  NQ+NKRSPI KTA 
Sbjct: 589  LSHRVASVLFGGVKLASVGFISSIGAVAASNTLYAVRKILNPALXVNQQNKRSPIFKTAF 648

Query: 380  VYGSFLGTSANLRYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVA 201
            VYG FLG SANLRYQIIAG+VEHR SD   +SQPLLVN+LSF  RT+NSYWGTQQW+D+A
Sbjct: 649  VYGCFLGISANLRYQIIAGVVEHRFSDQ-FASQPLLVNMLSFFARTINSYWGTQQWVDLA 707

Query: 200  RYTGLQTQKSKATSDPPSETLNLSAL----TDEVSVDEMKNQ 87
            R+TGLQTQKS+  S    ++ N +AL     +E  +DE+KNQ
Sbjct: 708  RFTGLQTQKSEPPSYQTVDSSNHAALECSSAEEAHIDEIKNQ 749


>ref|XP_002311251.1| predicted protein [Populus trichocarpa] gi|222851071|gb|EEE88618.1|
            predicted protein [Populus trichocarpa]
          Length = 726

 Score =  207 bits (526), Expect = 1e-51
 Identities = 103/162 (63%), Positives = 131/162 (80%), Gaps = 4/162 (2%)
 Frame = -1

Query: 560  LNHRIAAVIIGGLKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTAL 381
            ++HR+A+VI+GG+KL+ VGFISSIG VA+SN+LY  R+L+NPALV +Q+ KRSPILKTA 
Sbjct: 566  ISHRVASVIVGGVKLSSVGFISSIGTVAASNLLYAIRKLINPALVTDQRTKRSPILKTAA 625

Query: 380  VYGSFLGTSANLRYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVA 201
            +YG FLGTSANLRYQIIAG+VEHRISD   SSQ LLVN+LSF VRT+NSYWGTQQW+D+A
Sbjct: 626  IYGCFLGTSANLRYQIIAGIVEHRISDE-FSSQTLLVNMLSFIVRTINSYWGTQQWVDLA 684

Query: 200  RYTGLQTQKSK----ATSDPPSETLNLSALTDEVSVDEMKNQ 87
            R++GLQ+QKS+     T D PS         ++ ++DE+ NQ
Sbjct: 685  RFSGLQSQKSEPPSYQTLDSPSNAAIGCNTLEDTNIDEINNQ 726


>ref|XP_002520805.1| conserved hypothetical protein [Ricinus communis]
            gi|223539936|gb|EEF41514.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 717

 Score =  203 bits (516), Expect = 2e-50
 Identities = 103/162 (63%), Positives = 129/162 (79%), Gaps = 5/162 (3%)
 Frame = -1

Query: 560  LNHRIAAVIIGGLKLAGVGFISSIGAVASSNILYGTRRLLNPALVANQKNKRSPILKTAL 381
            LNHR+A+V+ GGLKL+ VGFISSIGAVA+SN LY  R+ LNPALV +Q+ +RSPILKTAL
Sbjct: 556  LNHRLASVLFGGLKLSSVGFISSIGAVAASNTLYTIRKFLNPALVTDQRTRRSPILKTAL 615

Query: 380  VYGSFLGTSANLRYQIIAGLVEHRISDHLLSSQPLLVNVLSFAVRTVNSYWGTQQWIDVA 201
            VY  FLGTSANLRYQIIAGL+EHRISD   SSQ LLVN+LSF VRT+NSYWGTQQW+D+A
Sbjct: 616  VYSCFLGTSANLRYQIIAGLIEHRISDE-FSSQTLLVNMLSFIVRTINSYWGTQQWVDLA 674

Query: 200  RYTGLQTQKSKATSD-----PPSETLNLSALTDEVSVDEMKN 90
            R++GLQ++K K +S        +  ++ S  ++   +DE+KN
Sbjct: 675  RFSGLQSKKDKPSSSYQALASTTNAIDGSNTSENAGIDEIKN 716


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