BLASTX nr result

ID: Coptis24_contig00023400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023400
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, ...    77   2e-12
ref|XP_003618131.1| FAR1-related protein [Medicago truncatula] g...    73   2e-11
ref|NP_195531.1| protein FAR1-related sequence 5 [Arabidopsis th...    73   3e-11
ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    72   4e-11
ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    72   4e-11

>ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, partial [Vitis
           vinifera]
          Length = 244

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
 Frame = -1

Query: 356 IEKKSSHGHDKQEAD------VYVEHKSLKEG-PNTVEHSEGEENN----APLPKLGSEP 210
           +E  SS G D  E+D       Y +H+ +++  PN ++   GE++     + + +   EP
Sbjct: 1   MENPSSLGFDSDESDPDMQAEAYEDHERIEDKLPNNLDLCAGEDDKIVEQSVINREVLEP 60

Query: 209 FVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTNDRR 30
           ++G++F S D+A EFY AY +  GF++R  H +RSRV+  VI +++VC+ +G R+     
Sbjct: 61  YIGMEFNSRDEAREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVY 120

Query: 29  YKEKVVRP 6
            K++V+ P
Sbjct: 121 RKDRVLPP 128


>ref|XP_003618131.1| FAR1-related protein [Medicago truncatula]
           gi|355519466|gb|AET01090.1| FAR1-related protein
           [Medicago truncatula]
          Length = 786

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
 Frame = -1

Query: 335 GHDKQEADVYVEHKSLKEGPNTVEHSEGEENNAP----LPKLGS-EPFVGLKFCSEDQAY 171
           G  ++EA + +  +  +E     E  E ++++       P+ G  EP  G++F SE+ A 
Sbjct: 14  GEYEEEARIEMMDEDEEEEYEEEEEEEEDDDDGSGAVYFPEAGDLEPSEGMEFESEEAAK 73

Query: 170 EFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTNDRRYKEK-VVRPR 3
            FYN+YA+  GFS R S  +RSR D ++I R++VCA +G R+ N++R K++ + RPR
Sbjct: 74  AFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPR 130


>ref|NP_195531.1| protein FAR1-related sequence 5 [Arabidopsis thaliana]
           gi|75213627|sp|Q9SZL8.1|FRS5_ARATH RecName: Full=Protein
           FAR1-RELATED SEQUENCE 5 gi|4467124|emb|CAB37558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|7270802|emb|CAB80483.1| hypothetical protein
           [Arabidopsis thaliana] gi|22531237|gb|AAM97122.1|
           unknown protein [Arabidopsis thaliana]
           gi|332661490|gb|AEE86890.1| protein FAR1-related
           sequence 5 [Arabidopsis thaliana]
          Length = 788

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = -1

Query: 224 LGSEPFVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRS 45
           L  EP+ GL+F SE+ A  FYN+YA+  GFS R S  +RSR D ++I R++VCA +G R+
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 44  TNDRRYKEK-VVRPR 3
            N++R K++ + RPR
Sbjct: 129 MNEKRTKDREIKRPR 143


>ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
           gi|449521695|ref|XP_004167865.1| PREDICTED: protein
           FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
          Length = 255

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 12/124 (9%)
 Frame = -1

Query: 347 KSSHGHDKQEADVYVEHKSLKEGPNTVE------------HSEGEENNAPLPKLGSEPFV 204
           +SSH  D  E+D+ ++ +  ++G +  +                E++   LP  G EP++
Sbjct: 4   QSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVEPYI 63

Query: 203 GLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTNDRRYK 24
           G++F S D+A EFY  Y +  GF++R  H +RSRV+  VI +++VC+ +G R+      K
Sbjct: 64  GMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVCRK 123

Query: 23  EKVV 12
           ++++
Sbjct: 124 DRIL 127


>ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 885

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/83 (45%), Positives = 49/83 (59%)
 Frame = -1

Query: 251 EENNAPLPKLGSEPFVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREY 72
           E N+A        P +G+ F SED AYEFYNAYA   GFS+RK ++ RS++D +V SR Y
Sbjct: 264 EANSANSSVTDGVPRLGMGFDSEDLAYEFYNAYAGRVGFSVRKDYVNRSKIDGAVASRRY 323

Query: 71  VCANQGVRSTNDRRYKEKVVRPR 3
            C  +G R  + R    K  RPR
Sbjct: 324 TCFREGFRQKDKRDLNVK--RPR 344



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/71 (43%), Positives = 47/71 (66%)
 Frame = -1

Query: 215 EPFVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTND 36
           EP VG++F SE+ AY+ Y  YA  +GFSIRK  + +SR++ +V+SR Y C  QG R +  
Sbjct: 141 EPKVGVEFGSEELAYKCYQRYAVMEGFSIRKDFVNKSRINGAVVSRRYTCFRQGHRPS-- 198

Query: 35  RRYKEKVVRPR 3
            +++  V +PR
Sbjct: 199 -KHEANVRKPR 208


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