BLASTX nr result
ID: Coptis24_contig00023400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023400 (368 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, ... 77 2e-12 ref|XP_003618131.1| FAR1-related protein [Medicago truncatula] g... 73 2e-11 ref|NP_195531.1| protein FAR1-related sequence 5 [Arabidopsis th... 73 3e-11 ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l... 72 4e-11 ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l... 72 4e-11 >ref|XP_002265090.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5, partial [Vitis vinifera] Length = 244 Score = 76.6 bits (187), Expect = 2e-12 Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 11/128 (8%) Frame = -1 Query: 356 IEKKSSHGHDKQEAD------VYVEHKSLKEG-PNTVEHSEGEENN----APLPKLGSEP 210 +E SS G D E+D Y +H+ +++ PN ++ GE++ + + + EP Sbjct: 1 MENPSSLGFDSDESDPDMQAEAYEDHERIEDKLPNNLDLCAGEDDKIVEQSVINREVLEP 60 Query: 209 FVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTNDRR 30 ++G++F S D+A EFY AY + GF++R H +RSRV+ VI +++VC+ +G R+ Sbjct: 61 YIGMEFNSRDEAREFYVAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVY 120 Query: 29 YKEKVVRP 6 K++V+ P Sbjct: 121 RKDRVLPP 128 >ref|XP_003618131.1| FAR1-related protein [Medicago truncatula] gi|355519466|gb|AET01090.1| FAR1-related protein [Medicago truncatula] Length = 786 Score = 73.2 bits (178), Expect = 2e-11 Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 6/117 (5%) Frame = -1 Query: 335 GHDKQEADVYVEHKSLKEGPNTVEHSEGEENNAP----LPKLGS-EPFVGLKFCSEDQAY 171 G ++EA + + + +E E E ++++ P+ G EP G++F SE+ A Sbjct: 14 GEYEEEARIEMMDEDEEEEYEEEEEEEEDDDDGSGAVYFPEAGDLEPSEGMEFESEEAAK 73 Query: 170 EFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTNDRRYKEK-VVRPR 3 FYN+YA+ GFS R S +RSR D ++I R++VCA +G R+ N++R K++ + RPR Sbjct: 74 AFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPR 130 >ref|NP_195531.1| protein FAR1-related sequence 5 [Arabidopsis thaliana] gi|75213627|sp|Q9SZL8.1|FRS5_ARATH RecName: Full=Protein FAR1-RELATED SEQUENCE 5 gi|4467124|emb|CAB37558.1| hypothetical protein [Arabidopsis thaliana] gi|7270802|emb|CAB80483.1| hypothetical protein [Arabidopsis thaliana] gi|22531237|gb|AAM97122.1| unknown protein [Arabidopsis thaliana] gi|332661490|gb|AEE86890.1| protein FAR1-related sequence 5 [Arabidopsis thaliana] Length = 788 Score = 72.8 bits (177), Expect = 3e-11 Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = -1 Query: 224 LGSEPFVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRS 45 L EP+ GL+F SE+ A FYN+YA+ GFS R S +RSR D ++I R++VCA +G R+ Sbjct: 69 LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128 Query: 44 TNDRRYKEK-VVRPR 3 N++R K++ + RPR Sbjct: 129 MNEKRTKDREIKRPR 143 >ref|XP_004152100.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis sativus] gi|449521695|ref|XP_004167865.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis sativus] Length = 255 Score = 72.4 bits (176), Expect = 4e-11 Identities = 37/124 (29%), Positives = 69/124 (55%), Gaps = 12/124 (9%) Frame = -1 Query: 347 KSSHGHDKQEADVYVEHKSLKEGPNTVE------------HSEGEENNAPLPKLGSEPFV 204 +SSH D E+D+ ++ + ++G + + E++ LP G EP++ Sbjct: 4 QSSHTFDSDESDIDIQTEIYEKGGSIDDIRNDLDFCLRDDDKVAEQSVVDLPMDGVEPYI 63 Query: 203 GLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTNDRRYK 24 G++F S D+A EFY Y + GF++R H +RSRV+ VI +++VC+ +G R+ K Sbjct: 64 GMEFSSRDEAREFYVNYGRRVGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVCRK 123 Query: 23 EKVV 12 ++++ Sbjct: 124 DRIL 127 >ref|XP_002271204.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera] Length = 885 Score = 72.4 bits (176), Expect = 4e-11 Identities = 38/83 (45%), Positives = 49/83 (59%) Frame = -1 Query: 251 EENNAPLPKLGSEPFVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREY 72 E N+A P +G+ F SED AYEFYNAYA GFS+RK ++ RS++D +V SR Y Sbjct: 264 EANSANSSVTDGVPRLGMGFDSEDLAYEFYNAYAGRVGFSVRKDYVNRSKIDGAVASRRY 323 Query: 71 VCANQGVRSTNDRRYKEKVVRPR 3 C +G R + R K RPR Sbjct: 324 TCFREGFRQKDKRDLNVK--RPR 344 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/71 (43%), Positives = 47/71 (66%) Frame = -1 Query: 215 EPFVGLKFCSEDQAYEFYNAYAKEKGFSIRKSHIQRSRVDRSVISREYVCANQGVRSTND 36 EP VG++F SE+ AY+ Y YA +GFSIRK + +SR++ +V+SR Y C QG R + Sbjct: 141 EPKVGVEFGSEELAYKCYQRYAVMEGFSIRKDFVNKSRINGAVVSRRYTCFRQGHRPS-- 198 Query: 35 RRYKEKVVRPR 3 +++ V +PR Sbjct: 199 -KHEANVRKPR 208