BLASTX nr result

ID: Coptis24_contig00023399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023399
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    75   4e-12
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    75   4e-12
ref|XP_002527090.1| dead box ATP-dependent RNA helicase, putativ...    73   2e-11
ref|XP_003637181.1| DEAD-box ATP-dependent RNA helicase [Medicag...    73   3e-11
emb|CBI29363.3| unnamed protein product [Vitis vinifera]               72   5e-11

>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 634

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -3

Query: 139 STRRIGSCPQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQIST 2
           S  ++ +  QVLEPSL+KGNRVMVFCNTLNSSRAVDH+LGENQIST
Sbjct: 360 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQIST 405


>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
           sativus]
          Length = 634

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -3

Query: 139 STRRIGSCPQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQIST 2
           S  ++ +  QVLEPSL+KGNRVMVFCNTLNSSRAVDH+LGENQIST
Sbjct: 360 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLGENQIST 405


>ref|XP_002527090.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223533513|gb|EEF35253.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 601

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/46 (76%), Positives = 40/46 (86%)
 Frame = -3

Query: 139 STRRIGSCPQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQIST 2
           S  ++ +  QVLEPSL+KGNRVMVFCNTLNSSRAVDH+L ENQIST
Sbjct: 361 SENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLAENQIST 406


>ref|XP_003637181.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355503116|gb|AES84319.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 684

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/43 (81%), Positives = 39/43 (90%)
 Frame = -3

Query: 130 RIGSCPQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQIST 2
           ++ S  QVLEPSL+KGNRVMVFCNTLNSSRAVDH+L ENQIST
Sbjct: 352 KLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQIST 394


>emb|CBI29363.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = -3

Query: 139 STRRIGSCPQVLEPSLSKGNRVMVFCNTLNSSRAVDHYLGENQIST 2
           S  ++ +  QVLEPSL+KGN+VMVFCNTLNSSRAVDH+LGENQI T
Sbjct: 229 SENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIFT 274


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