BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023392
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   144   2e-32
emb|CBI22243.3| unnamed protein product [Vitis vinifera]              143   4e-32
ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   138   9e-31
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2...   135   6e-30

>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  144 bits (363), Expect = 2e-32
 Identities = 72/102 (70%), Positives = 80/102 (78%)
 Frame = +3

Query: 3   EPNPIIWRTLLGACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERV 182
           EPN I+WRTLLGACRI GNV LG+RAN +LL MR + SGDYVLLSNIYAS+GEWDGVE+V
Sbjct: 443 EPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKV 502

Query: 183 RNLMDDRGVIKEAGSSTIDTDNKELMGFFFNSKS*LNLEMVF 308
           R LMDD GV KEAG S I+ DNK LM F F+SK  LN    F
Sbjct: 503 RKLMDDSGVRKEAGCSLIEGDNKALMHFLFDSKPKLNSRKPF 544


>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  143 bits (360), Expect = 4e-32
 Identities = 71/99 (71%), Positives = 80/99 (80%)
 Frame = +3

Query: 3   EPNPIIWRTLLGACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERV 182
           EPN I+WRTLLGACRI GNV LG+RAN +LL MR + SGDYVLLSNIYAS+GEWDGVE+V
Sbjct: 408 EPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKV 467

Query: 183 RNLMDDRGVIKEAGSSTIDTDNKELMGFFFNSKS*LNLE 299
           R LMDD GV KEAG S I+ DNK LM F F+SK  L +E
Sbjct: 468 RKLMDDSGVRKEAGCSLIEGDNKALMHFLFDSKPNLFIE 506


>ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like, partial [Cucumis sativus]
          Length = 315

 Score =  138 bits (348), Expect = 9e-31
 Identities = 66/93 (70%), Positives = 78/93 (83%)
 Frame = +3

Query: 3   EPNPIIWRTLLGACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERV 182
           EPN IIWRTLLGACR+ G+V LG+RANE+LL MR++ SGDYVLLSNIYAS+GEWDGV++V
Sbjct: 216 EPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKV 275

Query: 183 RNLMDDRGVIKEAGSSTIDTDNKELMGFFFNSK 281
           R LMDD GV K+ G S ID+DN  LM F F+SK
Sbjct: 276 RKLMDDGGVKKKVGHSLIDSDNSFLMHFLFDSK 308


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  138 bits (348), Expect = 9e-31
 Identities = 66/93 (70%), Positives = 78/93 (83%)
 Frame = +3

Query: 3   EPNPIIWRTLLGACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERV 182
           EPN IIWRTLLGACR+ G+V LG+RANE+LL MR++ SGDYVLLSNIYAS+GEWDGV++V
Sbjct: 443 EPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKV 502

Query: 183 RNLMDDRGVIKEAGSSTIDTDNKELMGFFFNSK 281
           R LMDD GV K+ G S ID+DN  LM F F+SK
Sbjct: 503 RKLMDDGGVKKKVGHSLIDSDNSFLMHFLFDSK 535


>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score =  135 bits (341), Expect = 6e-30
 Identities = 66/97 (68%), Positives = 76/97 (78%)
 Frame = +3

Query: 3   EPNPIIWRTLLGACRIQGNVVLGKRANEKLLAMRRNHSGDYVLLSNIYASKGEWDGVERV 182
           EPN IIWRTLLGACR+ GNV LG+ ANE+LL +RR+ SGDYVLLSNIYAS GEWDG E V
Sbjct: 444 EPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEV 503

Query: 183 RNLMDDRGVIKEAGSSTIDTDNKELMGFFFNSKS*LN 293
           R LMDD GV KEAG S I+ D++ +M F F+ K  LN
Sbjct: 504 RKLMDDGGVRKEAGRSLIEADDRAVMQFLFDPKPKLN 540