BLASTX nr result

ID: Coptis24_contig00023390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023390
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281865.1| PREDICTED: uncharacterized protein LOC100258...   128   1e-27
ref|XP_002326188.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002322887.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_004137830.1| PREDICTED: uncharacterized protein LOC101218...   113   4e-23
ref|XP_002519518.1| hypothetical protein RCOM_1355450 [Ricinus c...   111   1e-22

>ref|XP_002281865.1| PREDICTED: uncharacterized protein LOC100258485 [Vitis vinifera]
          Length = 426

 Score =  128 bits (321), Expect = 1e-27
 Identities = 93/246 (37%), Positives = 117/246 (47%), Gaps = 45/246 (18%)
 Frame = +1

Query: 67  KTIVENGTLIVTTFIDHDPXXXXXXXXXXXXGTTTXXXXXXXXXXXXXXXXXXXXFLHLT 246
           +T+VE+GTLI+T FID DP            G                       FLHLT
Sbjct: 45  RTVVEDGTLILTAFIDRDPSLRALLSRLDIAGKNIPATLSSPPTVNPRHRRRP--FLHLT 102

Query: 247 RVGTLXXXXXXXXXX--RRGYLHRKKSVVNTSFVNLSYLDGK------------------ 366
           RVGTL            R  +   +++ +N SF++LS  D K                  
Sbjct: 103 RVGTLDDDFFSGDEYDDRTLFGGGRRTQINGSFLSLSRFDPKLGFSGSVEDNGIRASEIV 162

Query: 367 ------KFEGIKFMVDDYRGGKEK-------------------AGIELARRDAATLFFLV 471
                 K EG+ F   +   G E                     G++L  RD+A LFFLV
Sbjct: 163 RSGFSFKGEGLLFTDGNDDDGDEGNQTVVLENKEERGDFPFFIKGMDLGSRDSAALFFLV 222

Query: 472 SFLSAGYGWLILGYLVMQSCVLGIVFIVVVNNYLRKYSSFFGNVLRGSDLGFKRLSGFIL 651
            FLSA YGW+ILG+LV  S VLGIVFI VVN++LR+ +SF G V  GS LG +RLSGFIL
Sbjct: 223 CFLSAAYGWVILGFLVTYSWVLGIVFISVVNDHLRRTTSFIGTVWDGSRLGLRRLSGFIL 282

Query: 652 IRWAVR 669
           +RWAVR
Sbjct: 283 MRWAVR 288


>ref|XP_002326188.1| predicted protein [Populus trichocarpa] gi|222833381|gb|EEE71858.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  120 bits (302), Expect = 2e-25
 Identities = 92/253 (36%), Positives = 113/253 (44%), Gaps = 52/253 (20%)
 Frame = +1

Query: 67  KTIVENGTLIVTTFIDHDPXXXXXXXXXXXXGTTTXXXXXXXXXXXXXXXXXXXXFLHLT 246
           +T +ENGT ++T+FID DP            G                       FLHLT
Sbjct: 45  RTFIENGTHVLTSFIDRDPSLKSLLSRLDLAGQP--HPSHPHHRIHTRLPRRRRPFLHLT 102

Query: 247 RVGTLXXXXXXXXXXRRGYLHRKKSVVNTSFV---------------------------- 342
           RVGTL              L   K   N SFV                            
Sbjct: 103 RVGTLDDDFFSADDEADSSLF-PKFPPNGSFVILHNFDPKFGFSDLVIDNGIKVPEIVRS 161

Query: 343 ---------NLSYLDGKKFEG-IKFMVDDYRG------GKEKA--------GIELARRDA 450
                    N S+LD K     I+   +D+        G++K         G+EL RRD 
Sbjct: 162 GIQFKAAEENHSFLDSKNNNNEIESSSEDFNNNESGKEGEDKILDLQFLVKGLELGRRDT 221

Query: 451 ATLFFLVSFLSAGYGWLILGYLVMQSCVLGIVFIVVVNNYLRKYSSFFGNVLRGSDLGFK 630
           A LFFLVSFLSA YGW+ILG+  + S +LG+VFIVVVN+ L +Y SF G V  GS LG K
Sbjct: 222 AALFFLVSFLSAAYGWVILGFTAIYSWILGVVFIVVVNDLLGRYGSFIGVVWNGSRLGSK 281

Query: 631 RLSGFILIRWAVR 669
           RL+GFIL+RWAVR
Sbjct: 282 RLAGFILMRWAVR 294


>ref|XP_002322887.1| predicted protein [Populus trichocarpa] gi|222867517|gb|EEF04648.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score =  114 bits (286), Expect = 1e-23
 Identities = 92/252 (36%), Positives = 109/252 (43%), Gaps = 51/252 (20%)
 Frame = +1

Query: 67  KTIVENGTLIVTTFIDHDPXXXXXXXXXXXXGTTTXXXXXXXXXXXXXXXXXXXXFLHLT 246
           +T  ENG  + ++FID DP            G                       FLHLT
Sbjct: 45  RTFFENGAHVFSSFIDRDPSLKSLLSRLDLAGR-------HHHRIHHPLPRRRRPFLHLT 97

Query: 247 RVGTLXXXXXXXXXXRRGYLHRKKSVVNTSFVNLSYLDGK-----------------KFE 375
           RVGTL              L   K   N SFV L   D K                    
Sbjct: 98  RVGTLDDDFFSADEESDSPLF-PKFPPNRSFVILHNFDPKFGFSDAVIDNGIKVPEIVRS 156

Query: 376 GIKFMV-----------------------DDYRG---GKEKA--------GIELARRDAA 453
           GI+F                         +D+     G+EK         G+EL RRDA 
Sbjct: 157 GIQFKAAEEIHSYVDNTNHDNDEDSERSREDFNSKENGEEKIVGLQFLVKGLELGRRDAT 216

Query: 454 TLFFLVSFLSAGYGWLILGYLVMQSCVLGIVFIVVVNNYLRKYSSFFGNVLRGSDLGFKR 633
            LFFLVSFLSA YGW+ILG+  + S VLGIVF+VVVN+ L +Y SF G V  GS LG KR
Sbjct: 217 ALFFLVSFLSAAYGWVILGFTAIYSWVLGIVFVVVVNDLLGRYGSFIGVVWDGSRLGSKR 276

Query: 634 LSGFILIRWAVR 669
           L+GFIL+RWAVR
Sbjct: 277 LAGFILMRWAVR 288


>ref|XP_004137830.1| PREDICTED: uncharacterized protein LOC101218916 [Cucumis sativus]
           gi|449483342|ref|XP_004156561.1| PREDICTED: LOW QUALITY
           PROTEIN: uncharacterized LOC101218916 [Cucumis sativus]
          Length = 443

 Score =  113 bits (282), Expect = 4e-23
 Identities = 91/257 (35%), Positives = 109/257 (42%), Gaps = 56/257 (21%)
 Frame = +1

Query: 67  KTIVENGTLIVTTFIDHDPXXXXXXXXXXXXGT-----TTXXXXXXXXXXXXXXXXXXXX 231
           + +VENGT  VT+FID DP            G      T+                    
Sbjct: 47  RVVVENGTQYVTSFIDRDPSLKALLSRLDIAGEQRLLRTSEDSSLSASVARRQRRQRRRP 106

Query: 232 FLHLTRVGTLXXXXXXXXXX-RRGYLHRKKS-VVNTSFV------------NLSYLDGKK 369
           FLHLTRVGTL            RG     ++   N SFV            +L   DG +
Sbjct: 107 FLHLTRVGTLDDDIFSGDGDDERGLFGTNRNHPPNASFVFFTQFSSISGFSDLVVDDGIR 166

Query: 370 FE-------GIKFMVDDYRGGKEKA------------------------------GIELA 438
                    G K     +   KE A                              G+EL 
Sbjct: 167 VSEVVRPGVGFKARSSSFSNDKESADDQEEKDRRLGGENVHQDMDRLVDLQFFVKGLELG 226

Query: 439 RRDAATLFFLVSFLSAGYGWLILGYLVMQSCVLGIVFIVVVNNYLRKYSSFFGNVLRGSD 618
           RRDAA LFF VSFLSA Y W++LG+LV  S   GIVFI V+N+   ++ SF G V  GS 
Sbjct: 227 RRDAAALFFFVSFLSAAYIWVMLGFLVTYSWASGIVFIAVLNDLTERFGSFVGMVWDGSR 286

Query: 619 LGFKRLSGFILIRWAVR 669
           LGFKRLSGFIL+RWAVR
Sbjct: 287 LGFKRLSGFILMRWAVR 303


>ref|XP_002519518.1| hypothetical protein RCOM_1355450 [Ricinus communis]
           gi|223541381|gb|EEF42932.1| hypothetical protein
           RCOM_1355450 [Ricinus communis]
          Length = 465

 Score =  111 bits (278), Expect = 1e-22
 Identities = 53/82 (64%), Positives = 66/82 (80%)
 Frame = +1

Query: 424 GIELARRDAATLFFLVSFLSAGYGWLILGYLVMQSCVLGIVFIVVVNNYLRKYSSFFGNV 603
           G+E+ RRDAA LFFLVSFLSA YGW+ILG+ V+ S +LG+VF+ VV N L K++SF G +
Sbjct: 211 GLEIGRRDAAALFFLVSFLSAAYGWVILGFTVIYSWILGVVFVAVVYNLLGKFNSFVGVI 270

Query: 604 LRGSDLGFKRLSGFILIRWAVR 669
             GS LG KRL+GFIL+RWAVR
Sbjct: 271 WDGSKLGLKRLTGFILMRWAVR 292


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