BLASTX nr result

ID: Coptis24_contig00023382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023382
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]              114   5e-23
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    81   3e-13

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score =  114 bits (284), Expect = 5e-23
 Identities = 103/331 (31%), Positives = 146/331 (44%), Gaps = 8/331 (2%)
 Frame = +2

Query: 5    DVVHDAQQRNFQDGCNIPLKMLAGPAQVFLPTPADNQTMYMVKEGQIXXXXXXXXXXXEK 184
            DV+H+ Q  N  D  N  LK   G +Q  L     NQ M   +                +
Sbjct: 400  DVLHNKQWGNGSDRSNFLLKGSVGTSQSNLHALESNQIMESTRS-----RCSTMSKVVGR 454

Query: 185  GREDSGYQSISDYIGVLSKSGDPLIANQSLENFRFLGTSSDVNRGKGPREAFIVERDNTS 364
            G  D+  QSIS Y+  +S+SG   I +  L N R LG  SD++R    RE  I+ERD  S
Sbjct: 455  GGTDNDAQSISAYVDSISRSGTSFIYSPPLPNERTLGKDSDISRHNNSREGVILERDAVS 514

Query: 365  SNIELRLGQPSQQSYNVEGSVVSTLQPQPLSTLQAQPFVMYSNSPKPLLQDPVFHNVGSP 544
            SNIELRLGQP QQS     SV+  + P+ L TL       +       + D  F+   + 
Sbjct: 515  SNIELRLGQPCQQSRTSRNSVLPVMGPRILDTLGDPQKSFFPEQLIHNILDFFFYAAANS 574

Query: 545  MLKEESRQNLGGLLPSNTSISHRGIQSKSNVRHL----APRDSAKVEKLKGDMVKRS--H 706
             + EE RQ L     ++ S + R     + V H        D+AK+E+ +GD  K S   
Sbjct: 575  NVMEECRQYLQCATGTSNSSARREQIPFNCVNHTFEINNALDAAKLEQFRGDAAKSSVIS 634

Query: 707  TYLPQFSTLPERDVLSQTSKNRINYSETFMFRAPH-GVYSGTNGPSEYCSNRKDGTE-EK 880
              L   +T  E ++ S+   N +N +  F+ R+ H   +     P     N  +G E E 
Sbjct: 635  MLLSHLTTPTEGNMQSKAINNVVNDNGHFVPRSLHFESHIAKRDPVYSPWNSANGLERES 694

Query: 881  QLNNIILGHFNHADRCKRVQDTADNCYYGTE 973
             +N+  L    + D+ KRV    D  Y  TE
Sbjct: 695  NIND--LSFHRYMDKGKRVGFVTDGSYAATE 723


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
            gi|223540952|gb|EEF42510.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 903

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 91/296 (30%), Positives = 131/296 (44%), Gaps = 14/296 (4%)
 Frame = +2

Query: 5    DVVHDAQQRNFQDGCNIPLKMLAGPAQVFLPTPADNQTMYMVKEGQIXXXXXXXXXXXEK 184
            D +HD QQRN QDG    LK L G +     +  DN     V +  I            +
Sbjct: 381  DALHDEQQRNGQDGNKFYLKGLVGTSLSNSCSVGDNH----VTDCSISRCSTMPNFAG-R 435

Query: 185  GREDSGYQSISDYIGVLSKSGDPLIANQSLENFRFLGTSSDVNRGKGPREAFIVERDNTS 364
            G E+      S YI  + KSG    A+ +L+N R L  SSDV RGK  ++   +E+D + 
Sbjct: 436  GPENVCQ---SMYIDAILKSGSLATAHPALQNCRALVKSSDVGRGKDAQDGATMEKDGSP 492

Query: 365  SNIELRLGQPSQQSYNVEGSVVSTLQPQPLSTLQAQPFVMYSNSPKPLLQDPVFHNVGSP 544
            S+IEL+LGQP Q   +    V+  + PQ  +TL         +  KP  Q+ + +NV S 
Sbjct: 493  SSIELKLGQPYQHGQSPGNPVLPVIGPQFYNTL--------VSPHKPFSQEQLINNV-SC 543

Query: 545  MLKEESRQNLGGLLPSNTSISHRGIQSK------SNVRHLAPRDSAKVEKLKGDMVKRSH 706
              +EESR+     LP    +S   I+ K       N  +    DS ++EKL  +M K S 
Sbjct: 544  QGEEESRR----CLPHAAHLSDSTIRRKQDHLRYGNSGNDRTVDSTELEKL--NMAKPSV 597

Query: 707  TYLPQFSTLPERDVLSQT--------SKNRINYSETFMFRAPHGVYSGTNGPSEYC 850
              L +   LPE    S+         S+ R   S    F + +  ++G N   E C
Sbjct: 598  VSLFKHYALPEGTPHSKATNSFEYVMSERRHCESHAVKFDSNNFSWNGGNSLDEQC 653


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