BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023381
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|NP_190885.5| tetratricopeptide repeat domain-containing prot...    79   3e-13
ref|XP_002877905.1| pentatricopeptide repeat-containing protein ...    79   3e-13
sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-c...    79   3e-13
gb|EAY88272.1| hypothetical protein OsI_09727 [Oryza sativa Indi...    79   4e-13

>ref|XP_002313317.1| predicted protein [Populus trichocarpa] gi|222849725|gb|EEE87272.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/58 (68%), Positives = 45/58 (77%)
 Frame = -2

Query: 178 RILTTEAAVQGIERRALSANSTRLWPKSVLEALTVAITNNQWESALKIFELLRKQDWY 5
           RIL TEAA++ IE++A S     LWPK+VLEAL  AI  NQWESALKIFELLRKQ WY
Sbjct: 54  RILRTEAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWESALKIFELLRKQHWY 111


>ref|NP_190885.5| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|332645523|gb|AEE79044.1| tetratricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 499

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -2

Query: 178 RILTTEAAVQGIERRALSANSTRLWPKSVLEALTVAITNNQWESALKIFELLRKQDWY 5
           RIL T+AAV+GIER+A S     LWPK+VLEAL  AI  N+W+SALKIF LLRKQ WY
Sbjct: 83  RILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWY 140


>ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323743|gb|EFH54164.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 439

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -2

Query: 178 RILTTEAAVQGIERRALSANSTRLWPKSVLEALTVAITNNQWESALKIFELLRKQDWY 5
           RIL T+AAV+GIER+A S     LWPK+VLEAL  AI  N+W+SALKIF LLRKQ WY
Sbjct: 33  RILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFHLLRKQHWY 90


>sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53170
           gi|6630737|emb|CAB64220.1| nodulin / glutamate-ammonia
           ligase-like protein [Arabidopsis thaliana]
          Length = 447

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -2

Query: 178 RILTTEAAVQGIERRALSANSTRLWPKSVLEALTVAITNNQWESALKIFELLRKQDWY 5
           RIL T+AAV+GIER+A S     LWPK+VLEAL  AI  N+W+SALKIF LLRKQ WY
Sbjct: 33  RILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWY 90


>gb|EAY88272.1| hypothetical protein OsI_09727 [Oryza sativa Indica Group]
          Length = 450

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
 Frame = -2

Query: 178 RILTTEAAVQGIERRALSAN---STRLWPKSVLEALTVAITNNQWESALKIFELLRKQDW 8
           RIL TEAAV G+ R+A +A+   STRLWP++VLEAL  A+ + +WESAL+IFELLRKQ W
Sbjct: 25  RILRTEAAVSGVSRKAAAASRQQSTRLWPRAVLEALDSAVASCRWESALEIFELLRKQQW 84

Query: 7   Y 5
           Y
Sbjct: 85  Y 85