BLASTX nr result

ID: Coptis24_contig00023378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023378
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA57372.1| TPA: hypothetical protein ZEAMMB73_111215 [Zea m...   243   8e-62
ref|XP_002458591.1| hypothetical protein SORBIDRAFT_03g036320 [S...   242   2e-61
gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]   237   6e-60
ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212...   236   1e-59
ref|XP_003576959.1| PREDICTED: uncharacterized protein LOC100826...   229   1e-57

>tpg|DAA57372.1| TPA: hypothetical protein ZEAMMB73_111215 [Zea mays]
          Length = 1220

 Score =  243 bits (620), Expect = 8e-62
 Identities = 177/416 (42%), Positives = 228/416 (54%), Gaps = 4/416 (0%)
 Frame = -3

Query: 1296 ELHWKKELTALRKAARFLPDPDTTXXXXXXXXXXSVLATSDLNYLSGTRGHYTGKLQSRS 1117
            ELH KKEL ALRKA RFL DP+T           S L+TS +        +  G   S  
Sbjct: 59   ELHLKKELIALRKA-RFLRDPETCSSWRSPLSSKSFLSTSGV-----INHNEVGSSLSEK 112

Query: 1116 SELDYHSPLKCKNNHKQVFLYNWRHTPSKSSDSGAKLDEQRNYGNERPVPLSPGDSSSDA 937
                  +P+K +   K V+LYNWRH  +KSS+SG KLD       +  V  S  +S   +
Sbjct: 113  RTEPAAAPVKSEKKRKNVYLYNWRHHSNKSSESGVKLDVD---DRQASVDCSL-ESPCIS 168

Query: 936  NKEACKSDTHVDDPVVLFRYRKPNLETXXXXXXXXXXXXXXXSRQRAVRRPSNSKLLDLP 757
            N    +SDT ++ PV ++  +  N  T                ++ A+R  + SKLLDL 
Sbjct: 169  NGMDSRSDTCLEVPVSIYSVQGSNSCTPVKRTVRRVRRSSFS-KKGAMRNSTVSKLLDLH 227

Query: 756  SISSEGPITSIEQSDDTEYCNSEDLRISTRELMRKSGYTSKPASPLLSRGENWSHS--SK 583
                   + S EQS+DTE  NSE     T E ++K GY S   SPL +    +S +  SK
Sbjct: 228  -------VNSAEQSEDTENYNSE-----THEHLQKVGYFSHSTSPLFAASGCFSSTNPSK 275

Query: 582  LLTRTQREDSSLSCTPASTNSYNRYRNKHHRTVESWDDTTASFNGDEG--EPLNLSRRQG 409
            LL   +RE SS SCTP ST+SY RY+ ++  TV SWD TTA+   D+G  +P  L   Q 
Sbjct: 276  LLRVPRREGSSFSCTPVSTSSYYRYKGRNPSTVGSWDGTTAASLDDDGLNQP-ELLTNQR 334

Query: 408  CGIPCYWSKRTPKHRGSGGCYSPSLSDTLRRKGSSMLCGSQTLYHXXXXXXXXXXKLVSQ 229
            CGIPCYWSKR+ KH+GS    SPSLSDTLRRKG+S+LCGSQT++             + +
Sbjct: 335  CGIPCYWSKRS-KHKGSERSCSPSLSDTLRRKGTSLLCGSQTMHGRKKSSGSNKYGYLKK 393

Query: 228  SAQGLPLLTNSFXXXXXXXXXXXXXXDELSTNFGELDLEALSRLDGQRWSLSCGSQ 61
            S+QG+PLL +S               DE+ST FGELDLEALSRLDG+RWS SC SQ
Sbjct: 394  SSQGVPLLGDS---SHFAYSSFDSASDEVSTIFGELDLEALSRLDGRRWS-SCKSQ 445


>ref|XP_002458591.1| hypothetical protein SORBIDRAFT_03g036320 [Sorghum bicolor]
            gi|241930566|gb|EES03711.1| hypothetical protein
            SORBIDRAFT_03g036320 [Sorghum bicolor]
          Length = 1176

 Score =  242 bits (617), Expect = 2e-61
 Identities = 178/416 (42%), Positives = 224/416 (53%), Gaps = 4/416 (0%)
 Frame = -3

Query: 1296 ELHWKKELTALRKAARFLPDPDTTXXXXXXXXXXSVLATSDLNYLSGTRGHYTGKLQSRS 1117
            ELH KKEL ALRKA RFL DP+T           S L TS +        +  G   S  
Sbjct: 13   ELHLKKELIALRKA-RFLRDPETCSSWRSPLSSKSFLTTSGV-----INHNEIGSSLSEK 66

Query: 1116 SELDYHSPLKCKNNHKQVFLYNWRHTPSKSSDSGAKLDEQRNYGNERPVPLSPGDSSSDA 937
                  +P K +   K V+LYNWRH  +KSS+SG KLD      +      SP  S    
Sbjct: 67   HTEPAAAPPKSEKKRKNVYLYNWRHHSNKSSESGVKLDADDRQASADCSLESPCIS---- 122

Query: 936  NKEACKSDTHVDDPVVLFRYRKPNLETXXXXXXXXXXXXXXXSRQRAVRRPSNSKLLDLP 757
            N    +SDT ++ PV ++  +  N  T                ++ A+R  + SKLLDL 
Sbjct: 123  NGMDSRSDTCLEVPVSIYSVQGSNSCTPVKRTVRRVRRSSFS-KKGAMRNSTVSKLLDLH 181

Query: 756  SISSEGPITSIEQSDDTEYCNSEDLRISTRELMRKSGYTSKPASPLLSRGENWSHS--SK 583
                   + S EQS+DTE  NSE     T E ++K GY S+  SPL +    +S +  SK
Sbjct: 182  -------VNSGEQSEDTENYNSE-----THEQLQKVGYFSRSTSPLFAASGCFSSTNPSK 229

Query: 582  LLTRTQREDSSLSCTPASTNSYNRYRNKHHRTVESWDDTTASFNGDEG--EPLNLSRRQG 409
            LL   +RE SS SCTP ST+SY RY+ ++  TV SWD TTA+   D+G  +P  L   Q 
Sbjct: 230  LLRVPRREGSSFSCTPVSTSSYYRYKGRNPSTVGSWDGTTAASLDDDGLNQP-ELLTNQR 288

Query: 408  CGIPCYWSKRTPKHRGSGGCYSPSLSDTLRRKGSSMLCGSQTLYHXXXXXXXXXXKLVSQ 229
            CGIPCYWSKR+ KH+GS    SPSLSDTLRRKGSS+LCGSQT++               +
Sbjct: 289  CGIPCYWSKRS-KHKGSERSCSPSLSDTLRRKGSSLLCGSQTIHGRKKSSGSNKYGYFKK 347

Query: 228  SAQGLPLLTNSFXXXXXXXXXXXXXXDELSTNFGELDLEALSRLDGQRWSLSCGSQ 61
            S+QG+PLL +S               DE+ST FGELDLEALSRLDG+RWS SC SQ
Sbjct: 348  SSQGVPLLGDS---SHFAYSSFDSASDEVSTIFGELDLEALSRLDGRRWS-SCKSQ 399


>gb|AFN58239.1| trichome branching-like protein [Gossypium arboreum]
          Length = 1223

 Score =  237 bits (604), Expect = 6e-60
 Identities = 185/445 (41%), Positives = 230/445 (51%), Gaps = 34/445 (7%)
 Frame = -3

Query: 1293 LHWKKELTALRKAARFLPDPDTTXXXXXXXXXXSVLATSDLNYLSGTRG--HYTGKLQSR 1120
            LH KKELT +RKAAR L DP TT            +A      LS + G  H    L   
Sbjct: 12   LHLKKELTQIRKAARVLRDPGTTSSWKSPINSSRSVAALGSESLSRSNGNAHLDLSLLPF 71

Query: 1119 SSELDYHSPLKCKNNH---KQVFLYNWRHTPSKS------------SDSGAKLDEQRNY- 988
              E + H  +   N +   K+VFLYNWR   S S             D G   D+  ++ 
Sbjct: 72   RVESNGHGRITNSNGNEKDKRVFLYNWRSQKSSSVNVDDDGEDDDDFDDGDDGDQSSSWI 131

Query: 987  -GNERPVPLSPGDSSSDANKEACKSDTHVDDPVVLFRYRKPNLETXXXXXXXXXXXXXXX 811
             G+     LS      D+  + C  ++      +LFR R  NL +               
Sbjct: 132  QGSVDENSLSDARKCGDSKSDTCLGESR--SASMLFRCRDANLVS----LVTPSAKRMLG 185

Query: 810  SRQRAVRRPSNSKLLDLPSISSEG--PITSIEQSDDTE-YCNSEDLRISTRELMRKSGYT 640
            + + + +  SN  +         G    +S++QSDDTE Y NSED R       + SG  
Sbjct: 186  ANKNSKKNGSNFDVFSRYEQKKNGVNRNSSVDQSDDTEDYSNSEDFR-------KISG-- 236

Query: 639  SKPASPLL--SRGENWSH-SSKLLTRTQREDSSLS-CTPA-STNSYNRYRNKHHRTVESW 475
               ASPLL   + +NW H SS+LL   ++EDSS S  TPA ST+SYN+Y N +   V SW
Sbjct: 237  ---ASPLLLKLKPKNWPHPSSRLLKADRKEDSSYSYSTPALSTSSYNKYFNHNPSVVGSW 293

Query: 474  DDTTASFN---GDEGEPLNLSRRQGCGIPCYWSKRTPKHR-GSGGCYSPSLSDTLRRKGS 307
            D TT S N    D  +PL+L  +QGCGIPCYW+KRTPKHR   G CYSPSLSDTLRRKGS
Sbjct: 294  DATTTSLNDGDDDVDDPLDLPGQQGCGIPCYWTKRTPKHRVVCGSCYSPSLSDTLRRKGS 353

Query: 306  SMLCGSQTLYHXXXXXXXXXXKLVS--QSAQG-LPLLTNSFXXXXXXXXXXXXXXDELST 136
            S+LCGSQ++YH          K  +  +SAQG LPLL+NS               DELST
Sbjct: 354  SILCGSQSMYHRHRRSLSLSNKRKNALRSAQGVLPLLSNSADGRGGSSIGTRCSDDELST 413

Query: 135  NFGELDLEALSRLDGQRWSLSCGSQ 61
            NFGELDLEALSRLDG+RWS SC SQ
Sbjct: 414  NFGELDLEALSRLDGRRWSSSCRSQ 438


>ref|XP_004133740.1| PREDICTED: uncharacterized protein LOC101212356 [Cucumis sativus]
            gi|449478091|ref|XP_004155220.1| PREDICTED:
            uncharacterized protein LOC101227259 [Cucumis sativus]
          Length = 1267

 Score =  236 bits (601), Expect = 1e-59
 Identities = 189/461 (40%), Positives = 238/461 (51%), Gaps = 50/461 (10%)
 Frame = -3

Query: 1296 ELHWKKELTALRKAARFLPDPDTT--XXXXXXXXXXSVLATSDLNYLSGTRGHYTGKLQ- 1126
            +LH KKELT +RKAAR L DP TT             + AT+      G        L+ 
Sbjct: 11   KLHLKKELTQIRKAARVLRDPGTTSSWKSPLSSSRSVMAATATAVVAGGASSSLNKNLEC 70

Query: 1125 -----SRSSELDYHSPLKCKNNH---KQVFLYNWRHTPSKSSDSGAKLDEQRNYGNE--- 979
                 S  S+LD   PL+ +N +   K+++LYNW+   S SS+  A L  + + GN+   
Sbjct: 71   ETRRYSGQSQLDAIVPLRNENRNPKDKKIYLYNWKSHKS-SSEKSATLQNEDHDGNDDNN 129

Query: 978  ---RPVP-LSPGDSSSDA-NKEACKSDTHVDD--PVVLFRYRKPNLETXXXXXXXXXXXX 820
                 VP +S   S SDA N    KSDT++ D    ++FR    NL +            
Sbjct: 130  DGSYSVPGVSLDGSLSDARNGGDSKSDTYLGDLYSSMVFRCGDANLVS----YSGPSAKR 185

Query: 819  XXXSRQRAVRRPSNSKLLDLPSISSEGPI-------------------TSIEQSDDTE-Y 700
                ++++ +  S+  +L        GP+                    SIEQSDDTE Y
Sbjct: 186  TSAFKKKSKKHCSHLDVLSRHQQKGPGPLMGRKLLEGHPSLSINFSQDDSIEQSDDTEDY 245

Query: 699  CNSEDLRISTRELMRKSGYTSKPASPLL--SRGENWSHSSKLLTRTQREDSSLS-CTPA- 532
             NSED R                ASPLL   + +++  SSK L  +++EDSS S  TPA 
Sbjct: 246  SNSEDFR------------RYSAASPLLLKLKHKSFHPSSKFLRNSRKEDSSYSYSTPAL 293

Query: 531  STNSYNRYRNKHHRTVESWDDTTASFNGDEGE---PLNLSRRQGCGIPCYWSKRTPKHRG 361
            ST+SYNRY N++  TV SWD TT S N  + E    L+   RQGCGIPCYWSKRTPKHRG
Sbjct: 294  STSSYNRYVNRNPSTVGSWDGTTTSINDADDEVDDRLDFPGRQGCGIPCYWSKRTPKHRG 353

Query: 360  -SGGCYSPSLSDTLRRKGSSMLCGSQTLYHXXXXXXXXXXKLVSQSAQG-LPLLTNSFXX 187
              G C SPSLSDTLRRKGSS+L GSQ++Y           +  S SA+G LPLLTNS   
Sbjct: 354  ICGSCCSPSLSDTLRRKGSSILFGSQSIYSRRKSINSSKRRFASGSARGVLPLLTNSADG 413

Query: 186  XXXXXXXXXXXXDELSTNFGELDLEALSRLDGQRWSLSCGS 64
                        DELSTNFGELDLEALSRLDG+RWS SC S
Sbjct: 414  GVGSSIGTGRSDDELSTNFGELDLEALSRLDGRRWSSSCRS 454


>ref|XP_003576959.1| PREDICTED: uncharacterized protein LOC100826587 [Brachypodium
            distachyon]
          Length = 1204

 Score =  229 bits (584), Expect = 1e-57
 Identities = 174/415 (41%), Positives = 226/415 (54%), Gaps = 3/415 (0%)
 Frame = -3

Query: 1296 ELHWKKELTALRKAARFLPDPDTTXXXXXXXXXXSVLATSDLNYLSGTRGHYTGKLQSRS 1117
            ELH +KELTALRKA RFL DP+T           S +ATS++ + S       G L S+ 
Sbjct: 13   ELHLRKELTALRKA-RFLQDPETCSTWRSPLSSRSPVATSNIIHGS----EVGGSLASKH 67

Query: 1116 SELDYHSPLKCKNNHKQVFLYNWRHTPSKSSDSGAKLDEQRNYGNERPVPLSPGDSSSDA 937
            +E     P K +   K+V+LYNWR   +KSS+SG KLDE+    N + +P S       +
Sbjct: 68   TESSSAQP-KSEKTSKKVYLYNWRQYSNKSSESGIKLDEELP-ANFKEIPCS-------S 118

Query: 936  NKEACKSDTHVDDPVVLFRYRKPNLETXXXXXXXXXXXXXXXSRQRAVRRPSNSKLLDLP 757
            N    K +T +D P  +  Y   +  +               S++  +R P+ S+LLD+ 
Sbjct: 119  NGVRSKRETCLDIPTSI--YSNQSSTSCTPVKRVARRRRGLSSQKGTIRNPTTSELLDIH 176

Query: 756  SISSEGPITSIEQSDDTEYCNSEDLRISTRELMRKSGYTSKPASPLLSRGE--NWSHSSK 583
                   I S  Q++DTE CNS+     ++EL ++ G  S   SPL +     + S+ SK
Sbjct: 177  -------IKSGNQTEDTENCNSK-----SQELFQEGGLFSHLTSPLFAGCGCVSSSNPSK 224

Query: 582  LLTRTQREDSSLSCTPASTNSYNRYRNKHHRTVESWDDTTASFNGDEGEPLNLSRRQGCG 403
            LL   +R+ SS SCTP ST+SY R+   ++ TV SW  T  SF+GDE     L RRQ   
Sbjct: 225  LLKMDRRDGSSFSCTPVSTSSYYRHGRGNNSTVGSW--TATSFDGDESNQSALWRRQRSR 282

Query: 402  IPCYWSKRTPKHRGSGGC-YSPSLSDTLRRKGSSMLCGSQTLYHXXXXXXXXXXKLVSQS 226
            +PC  SKR  KH+GS G  YSPSLSDTLRRKGSS+LCGSQTL                +S
Sbjct: 283  VPCNSSKRG-KHKGSRGSNYSPSLSDTLRRKGSSLLCGSQTLRSKKRSSASMKWVHAKKS 341

Query: 225  AQGLPLLTNSFXXXXXXXXXXXXXXDELSTNFGELDLEALSRLDGQRWSLSCGSQ 61
            AQG+PLL +S               DELSTN GELDLEALSRLDG+RWS SC SQ
Sbjct: 342  AQGMPLLGDS---CDFGSSSFDSSSDELSTNVGELDLEALSRLDGRRWS-SCKSQ 392


Top