BLASTX nr result

ID: Coptis24_contig00023375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023375
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530754.1| prephenate dehydrogenase, putative [Ricinus ...   167   1e-39
ref|XP_002329049.1| arogenate dehydrogenase [Populus trichocarpa...   167   1e-39
ref|XP_003525645.1| PREDICTED: arogenate dehydrogenase 1, chloro...   165   7e-39
ref|XP_002331058.1| arogenate dehydrogenase [Populus trichocarpa...   164   1e-38
ref|XP_003632837.1| PREDICTED: LOW QUALITY PROTEIN: arogenate de...   162   6e-38

>ref|XP_002530754.1| prephenate dehydrogenase, putative [Ricinus communis]
           gi|223529670|gb|EEF31614.1| prephenate dehydrogenase,
           putative [Ricinus communis]
          Length = 690

 Score =  167 bits (424), Expect = 1e-39
 Identities = 76/105 (72%), Positives = 93/105 (88%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           ++KVR+G +E R++RCDRFL+IFA+EGC M EMSC EHD HAA SQFITH MGR LEK G
Sbjct: 526 FDKVRVGSDERRVSRCDRFLDIFAREGCRMVEMSCSEHDWHAAGSQFITHTMGRILEKLG 585

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           +ESTPINTKGYE+LL+LV NT+GDSF+L+YGLF+YN N++EQLER
Sbjct: 586 LESTPINTKGYETLLNLVENTAGDSFDLYYGLFMYNVNAMEQLER 630



 Score =  158 bits (400), Expect = 6e-37
 Identities = 74/105 (70%), Positives = 88/105 (83%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           YEKVRIG EESR+ RC  FL++FA+EGC M E+SC EHD++AA SQFITH +GR LE   
Sbjct: 209 YEKVRIGNEESRVTRCKSFLDVFAREGCKMVELSCHEHDKYAAGSQFITHTVGRVLEMLS 268

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           +ESTPINTKGYESLL LV NT+ DSF+L+YGLF+YNKN+LE LER
Sbjct: 269 LESTPINTKGYESLLGLVENTAEDSFDLYYGLFMYNKNALEMLER 313


>ref|XP_002329049.1| arogenate dehydrogenase [Populus trichocarpa]
           gi|222839720|gb|EEE78043.1| arogenate dehydrogenase
           [Populus trichocarpa]
          Length = 363

 Score =  167 bits (423), Expect = 1e-39
 Identities = 75/105 (71%), Positives = 93/105 (88%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           Y+KVRIG EE RI R +RFL++FA+EGC M EM+C EHDR+AA SQF+TH MGR LE+FG
Sbjct: 201 YDKVRIGNEEDRITRVERFLDVFAKEGCRMVEMTCAEHDRYAAGSQFVTHTMGRVLERFG 260

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           ++S+PINTKGY++LLDLV NT GDSFEL+YGLF+YNKN++EQLER
Sbjct: 261 LDSSPINTKGYDTLLDLVENTGGDSFELYYGLFMYNKNAMEQLER 305


>ref|XP_003525645.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like [Glycine
           max]
          Length = 685

 Score =  165 bits (417), Expect = 7e-39
 Identities = 79/105 (75%), Positives = 89/105 (84%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           YEKVRIG +E RI RC++FL IFA+EGC M EMSC +HD+ AA SQFITH +GR LE   
Sbjct: 207 YEKVRIGSDEHRIARCEKFLGIFAREGCRMVEMSCADHDKFAAGSQFITHTVGRVLEMLT 266

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           VESTPINTKGYESLL+LV NTSGDSF+LFYGLF+YNKNSLE LER
Sbjct: 267 VESTPINTKGYESLLNLVENTSGDSFDLFYGLFMYNKNSLEMLER 311



 Score =  160 bits (406), Expect = 1e-37
 Identities = 75/105 (71%), Positives = 89/105 (84%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           Y+KVRIGI+ESR +RCD+FL+IFA EGC M EMSC EHD HAA SQFITH  GR LEK  
Sbjct: 534 YDKVRIGIDESRTSRCDQFLDIFASEGCRMVEMSCAEHDWHAAGSQFITHTTGRFLEKLE 593

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           +E TPI+TKGYE+LL LV NT+GDSF+L+YGLF+YN N++EQLER
Sbjct: 594 LEGTPIDTKGYETLLSLVENTAGDSFDLYYGLFLYNINAMEQLER 638


>ref|XP_002331058.1| arogenate dehydrogenase [Populus trichocarpa]
           gi|222872988|gb|EEF10119.1| arogenate dehydrogenase
           [Populus trichocarpa]
          Length = 653

 Score =  164 bits (414), Expect = 1e-38
 Identities = 76/105 (72%), Positives = 89/105 (84%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           YE VRIG EE+R+NRC +FL IF +EGC M EMSC EHD++AAESQF+TH +GR LE   
Sbjct: 168 YENVRIGNEENRVNRCKKFLEIFEREGCKMVEMSCQEHDKYAAESQFLTHTVGRVLEMLK 227

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           +ESTPINTKGYESLLDLV NTSGDSF+L+YGLF+YN+N LE LER
Sbjct: 228 LESTPINTKGYESLLDLVENTSGDSFDLYYGLFMYNRNVLEMLER 272



 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/105 (71%), Positives = 92/105 (87%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           +EKVRIG E SR++RCD+FL+IFA+E C M EMSC EHD +AA SQFITH MGR LEK G
Sbjct: 486 FEKVRIGSEGSRVSRCDKFLDIFARERCRMVEMSCAEHDWYAAGSQFITHTMGRVLEKLG 545

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           +ESTP+NTKGYE+LL+LV NT+GDSF+L+YGLF+YN N++EQLER
Sbjct: 546 MESTPVNTKGYETLLNLVENTAGDSFDLYYGLFMYNVNAMEQLER 590


>ref|XP_003632837.1| PREDICTED: LOW QUALITY PROTEIN: arogenate dehydrogenase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 686

 Score =  162 bits (409), Expect = 6e-38
 Identities = 73/105 (69%), Positives = 92/105 (87%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           Y+KVRIG +E R+ RC +FL+IFA+EGC M EM+C EHD++AA SQFITH MGR LE+FG
Sbjct: 507 YDKVRIGNDEFRMARCSKFLDIFAREGCRMVEMTCAEHDKYAAGSQFITHTMGRVLERFG 566

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
           +EST INTKGYE+LL+LV NT+GDSF+L+YGLF+YN N++EQLER
Sbjct: 567 LESTEINTKGYETLLNLVENTAGDSFDLYYGLFVYNNNAMEQLER 611



 Score =  153 bits (387), Expect = 2e-35
 Identities = 69/105 (65%), Positives = 90/105 (85%)
 Frame = -2

Query: 603 YEKVRIGIEESRINRCDRFLNIFAQEGCNMKEMSCGEHDRHAAESQFITHVMGRTLEKFG 424
           Y+KVRIG ++ RI+RC RFL++FA+EGC M EMSC +HD++AAESQFITH MGR LE+FG
Sbjct: 191 YDKVRIGNDDIRISRCGRFLDVFAREGCRMVEMSCADHDKYAAESQFITHTMGRILERFG 250

Query: 423 VESTPINTKGYESLLDLVSNTSGDSFELFYGLFIYNKNSLEQLER 289
            ES+ INTKGYE+LL L+ NT+ DSF+L+YGL +YN N++EQLE+
Sbjct: 251 FESSSINTKGYETLLKLMENTAKDSFDLYYGLSMYNSNAMEQLEK 295


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