BLASTX nr result

ID: Coptis24_contig00023367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023367
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24343.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_002272310.1| PREDICTED: protein kinase 2B, chloroplastic-...   154   9e-36
ref|XP_002532579.1| conserved hypothetical protein [Ricinus comm...   145   4e-33
ref|XP_002313478.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_003543286.1| PREDICTED: protein kinase 2A, chloroplastic-...   140   1e-31

>emb|CBI24343.3| unnamed protein product [Vitis vinifera]
          Length = 422

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/125 (64%), Positives = 99/125 (79%), Gaps = 4/125 (3%)
 Frame = -2

Query: 377 VYSFGVVLLELLSGKRALDEDRPGFLD-SLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKE 201
           VYSFGVVLLELLSG+RA+D+++ G ++ +LVDWAKPFLSDNRRVLRIMDTRLGGQYSKK 
Sbjct: 273 VYSFGVVLLELLSGRRAMDDEKAGGVEETLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKG 332

Query: 200 AQTLAALVLQCLYTDPKNRPHMKDVLTTLEQLQTPNNNVRRTHHRMDHRVVKHTS---YH 30
           AQ  A+L LQCL+TDPKNRP M DVL  LE+L T  +  R    R+++ ++KH+S   + 
Sbjct: 333 AQAAASLALQCLHTDPKNRPLMTDVLAALERLPTSKDIPRTPSPRVEYHIMKHSSNPGHT 392

Query: 29  HKAKA 15
           HKA A
Sbjct: 393 HKATA 397


>ref|XP_002272310.1| PREDICTED: protein kinase 2B, chloroplastic-like [Vitis vinifera]
          Length = 403

 Score =  154 bits (388), Expect = 9e-36
 Identities = 80/125 (64%), Positives = 99/125 (79%), Gaps = 4/125 (3%)
 Frame = -2

Query: 377 VYSFGVVLLELLSGKRALDEDRPGFLD-SLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKE 201
           VYSFGVVLLELLSG+RA+D+++ G ++ +LVDWAKPFLSDNRRVLRIMDTRLGGQYSKK 
Sbjct: 273 VYSFGVVLLELLSGRRAMDDEKAGGVEETLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKG 332

Query: 200 AQTLAALVLQCLYTDPKNRPHMKDVLTTLEQLQTPNNNVRRTHHRMDHRVVKHTS---YH 30
           AQ  A+L LQCL+TDPKNRP M DVL  LE+L T  +  R    R+++ ++KH+S   + 
Sbjct: 333 AQAAASLALQCLHTDPKNRPLMTDVLAALERLPTSKDIPRTPSPRVEYHIMKHSSNPGHT 392

Query: 29  HKAKA 15
           HKA A
Sbjct: 393 HKATA 397


>ref|XP_002532579.1| conserved hypothetical protein [Ricinus communis]
           gi|223527688|gb|EEF29796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 186

 Score =  145 bits (365), Expect = 4e-33
 Identities = 79/126 (62%), Positives = 93/126 (73%), Gaps = 12/126 (9%)
 Frame = -2

Query: 377 VYSFGVVLLELLSGKRALDEDRPGFLD-SLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKE 201
           VYSFGVVLLELLSG+RA+D++R  F++ +LVDWAKPFLSD RRVLRIMDTRLGGQYSKK 
Sbjct: 58  VYSFGVVLLELLSGRRAMDDERVNFIEETLVDWAKPFLSDPRRVLRIMDTRLGGQYSKKG 117

Query: 200 AQTLAALVLQCLYTDPKNRPHMKDVLTTLEQLQTPN-----------NNVRRTHHRMDHR 54
           AQ  AAL LQCL+TDPKNRP M +VLTTLE+L T             N+ R  +    HR
Sbjct: 118 AQAAAALALQCLHTDPKNRPQMIEVLTTLEKLNTSKDVSRAPPPAKLNSHRINNMNSPHR 177

Query: 53  VVKHTS 36
           + + TS
Sbjct: 178 INQATS 183


>ref|XP_002313478.1| predicted protein [Populus trichocarpa] gi|222849886|gb|EEE87433.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  144 bits (362), Expect = 1e-32
 Identities = 78/114 (68%), Positives = 93/114 (81%), Gaps = 3/114 (2%)
 Frame = -2

Query: 377 VYSFGVVLLELLSGKRALDEDRPGFLD-SLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKE 201
           VYS+GVVLLELLSG+RA+DE+R GF D +LVDWAKPFL D+RRVLRIMDTRLGGQY KK 
Sbjct: 217 VYSYGVVLLELLSGRRAMDEERGGFDDETLVDWAKPFLIDSRRVLRIMDTRLGGQYPKKA 276

Query: 200 AQTLAALVLQCLYTDPKNRPHMKDVLTTLEQLQTPNNNVRRTHH--RMDHRVVK 45
           AQ  AAL LQCL+TDPKNRP M DVLTTLE+L T + ++ RT    ++D+  +K
Sbjct: 277 AQAAAALALQCLHTDPKNRPPMIDVLTTLEKLIT-SKDIPRTARPVKLDNHGIK 329


>ref|XP_003543286.1| PREDICTED: protein kinase 2A, chloroplastic-like [Glycine max]
          Length = 382

 Score =  140 bits (352), Expect = 1e-31
 Identities = 72/104 (69%), Positives = 83/104 (79%), Gaps = 1/104 (0%)
 Frame = -2

Query: 377 VYSFGVVLLELLSGKRALDEDRPGFLD-SLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKE 201
           VYSFGVVLLELL+G+RA+++D PGF + +LVDWAKPFL+DNRRVLRIMDTRLGGQYSKK 
Sbjct: 265 VYSFGVVLLELLTGRRAVEDDGPGFSEETLVDWAKPFLNDNRRVLRIMDTRLGGQYSKKG 324

Query: 200 AQTLAALVLQCLYTDPKNRPHMKDVLTTLEQLQTPNNNVRRTHH 69
           AQ  AAL LQCL TDPK RP M +VL  LE L + N+  R   H
Sbjct: 325 AQAAAALALQCLNTDPKFRPPMVEVLAALEALNSSNSFTRTPKH 368


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