BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023347
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]   640   0.0  
ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop...   636   e-180
emb|CBI23309.3| unnamed protein product [Vitis vinifera]              636   e-180
ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleop...   617   e-174
emb|CBI23305.3| unnamed protein product [Vitis vinifera]              605   e-170

>emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
          Length = 1021

 Score =  640 bits (1650), Expect = 0.0
 Identities = 323/449 (71%), Positives = 369/449 (82%), Gaps = 10/449 (2%)
 Frame = +1

Query: 46   ILSHHSLFSMASIKRQLSPTQEQEPNSKKTKLT-----QPITMQHVTLNPADCNLDFDIE 210
            +L+  S FSMASIKRQLS  + +EP SKK K       +  T Q V LNPADC+LDF+I 
Sbjct: 159  VLATVSYFSMASIKRQLS--EPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIV 216

Query: 211  ENGKGGQALYEKGFAYCWSGARANVGIKNGKYIFGCKIISAQPVEMEDTPLDQQHVCRVG 390
             +G  G AL++ GFAYCWSGAR NVGI  GKY FGCKIIS QPV+MEDTP DQQHVCR+G
Sbjct: 217  GDGLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLG 276

Query: 391  VSRGDDAVGNLGETWCSFGYGGTGKFSNAGKFMNYGETFGVGDTIVCVVDLESKPLASIG 570
            +SRGDDAVGNLGET  SFG+GGTGKFS AGKF NYGE FGVGDTIVC V+LE+KPLASI 
Sbjct: 277  ISRGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASIS 336

Query: 571  FFKNGKWLGIAKEFYAGV-----VDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLV 735
            F KNGKWLG+AKEF AGV     VDSP+     WESA+FPHVLLKNV+V++QF  E+GLV
Sbjct: 337  FSKNGKWLGVAKEFDAGVKGLGVVDSPMRQ-LHWESALFPHVLLKNVMVQVQFSTEEGLV 395

Query: 736  PDEGFKVWDCAFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYHL 915
            P+EG+K W  A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY L
Sbjct: 396  PEEGYKPWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVL 455

Query: 916  LGTNLALDQMKVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKS 1095
            LGTNLALDQMKV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+
Sbjct: 456  LGTNLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKN 515

Query: 1096 ARKRKLRPFIQYRKIAVVVFPRPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPKSKD 1275
            ARKRKL+PF  ++KIAVV+FP+P+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKD
Sbjct: 516  ARKRKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKD 575

Query: 1276 MPASDEFFDQVWFPELNREDSQRYLEEMK 1362
            MP SDE FDQV FPELNR  +Q+ LEEMK
Sbjct: 576  MPGSDEDFDQVLFPELNRGXAQKCLEEMK 604


>ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Vitis vinifera]
          Length = 514

 Score =  636 bits (1641), Expect = e-180
 Identities = 319/440 (72%), Positives = 365/440 (82%), Gaps = 10/440 (2%)
 Frame = +1

Query: 73   MASIKRQLSPTQEQEPNSKKTKLT-----QPITMQHVTLNPADCNLDFDIEENGKGGQAL 237
            MASIKRQLS  + +EP SKK K       +  T Q V LNPADC+LDF+I  +G  G AL
Sbjct: 1    MASIKRQLS--EPEEPESKKPKAVLSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSAL 58

Query: 238  YEKGFAYCWSGARANVGIKNGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGVSRGDDAVG 417
            ++ GFAYCWSGAR NVGI  GKY FGCKIIS QPV+MEDTP DQQHVCR+G+SRGDDAVG
Sbjct: 59   HDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVG 118

Query: 418  NLGETWCSFGYGGTGKFSNAGKFMNYGETFGVGDTIVCVVDLESKPLASIGFFKNGKWLG 597
            NLGET  SFG+GGTGKFS AGKF NYGE FGVGDTIVC V+LE+KPLASI F KNGKWLG
Sbjct: 119  NLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLG 178

Query: 598  IAKEFYAGV-----VDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFKVWD 762
            +AKEF AGV     VDSP+     WESA+FPHVLLKNV+V++QF  E+GLVP+EG+K W 
Sbjct: 179  VAKEFDAGVKGLGVVDSPMRQ-LHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWA 237

Query: 763  CAFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYHLLGTNLALDQ 942
             A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY LLGTNLALDQ
Sbjct: 238  SALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQ 297

Query: 943  MKVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKLRPF 1122
            MKV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL+PF
Sbjct: 298  MKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPF 357

Query: 1123 IQYRKIAVVVFPRPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPKSKDMPASDEFFD 1302
              ++KIAVV+FP+P+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP+SKDMP SDE FD
Sbjct: 358  ANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPGSDEDFD 417

Query: 1303 QVWFPELNREDSQRYLEEMK 1362
            QV FPELNR ++Q+ LEEMK
Sbjct: 418  QVLFPELNRGEAQKCLEEMK 437


>emb|CBI23309.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  636 bits (1641), Expect = e-180
 Identities = 319/440 (72%), Positives = 365/440 (82%), Gaps = 10/440 (2%)
 Frame = +1

Query: 73   MASIKRQLSPTQEQEPNSKKTKLT-----QPITMQHVTLNPADCNLDFDIEENGKGGQAL 237
            MASIKRQLS  + +EP SKK K       +  T Q V LNPADC+LDF+I  +G  G AL
Sbjct: 1    MASIKRQLS--EPEEPESKKPKAVLSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSAL 58

Query: 238  YEKGFAYCWSGARANVGIKNGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGVSRGDDAVG 417
            ++ GFAYCWSGAR NVGI  GKY FGCKIIS QPV+MEDTP DQQHVCR+G+SRGDDAVG
Sbjct: 59   HDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVG 118

Query: 418  NLGETWCSFGYGGTGKFSNAGKFMNYGETFGVGDTIVCVVDLESKPLASIGFFKNGKWLG 597
            NLGET  SFG+GGTGKFS AGKF NYGE FGVGDTIVC V+LE+KPLASI F KNGKWLG
Sbjct: 119  NLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLG 178

Query: 598  IAKEFYAGV-----VDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFKVWD 762
            +AKEF AGV     VDSP+     WESA+FPHVLLKNV+V++QF  E+GLVP+EG+K W 
Sbjct: 179  VAKEFDAGVKGLGVVDSPMRQ-LHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWA 237

Query: 763  CAFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYHLLGTNLALDQ 942
             A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY LLGTNLALDQ
Sbjct: 238  SALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQ 297

Query: 943  MKVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKLRPF 1122
            MKV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL+PF
Sbjct: 298  MKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPF 357

Query: 1123 IQYRKIAVVVFPRPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPKSKDMPASDEFFD 1302
              ++KIAVV+FP+P+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP+SKDMP SDE FD
Sbjct: 358  ANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPGSDEDFD 417

Query: 1303 QVWFPELNREDSQRYLEEMK 1362
            QV FPELNR ++Q+ LEEMK
Sbjct: 418  QVLFPELNRGEAQKCLEEMK 437


>ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
            1-like [Vitis vinifera]
          Length = 590

 Score =  617 bits (1591), Expect = e-174
 Identities = 311/436 (71%), Positives = 357/436 (81%), Gaps = 10/436 (2%)
 Frame = +1

Query: 46   ILSHHSLFSMASIKRQLSPTQEQEPNSKKTKLT-----QPITMQHVTLNPADCNLDFDIE 210
            +L+  S FSMASIKRQLS  + +EP SKK K       +  T Q V LNPADC+LDF+I 
Sbjct: 139  VLATVSYFSMASIKRQLS--EPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIV 196

Query: 211  ENGKGGQALYEKGFAYCWSGARANVGIKNGKYIFGCKIISAQPVEMEDTPLDQQHVCRVG 390
             +G  G AL++ GFAYCWSGAR NVGI  GKY FGCKIIS QPV+MEDTP DQQHVCR+G
Sbjct: 197  GDGLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLG 256

Query: 391  VSRGDDAVGNLGETWCSFGYGGTGKFSNAGKFMNYGETFGVGDTIVCVVDLESKPLASIG 570
            +SRGDDAVGNLGET  SFG+GGTGKFS AGKF NYGE FGVGDTIVC V+LE+KPLASI 
Sbjct: 257  ISRGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASIS 316

Query: 571  FFKNGKWLGIAKEFYAGV-----VDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLV 735
            F KNGKWLG+AKEF AGV     VDSP+     WESA+FPHVLLKNV+V++QF  E+GLV
Sbjct: 317  FSKNGKWLGVAKEFDAGVKGLGVVDSPMRQ-LHWESALFPHVLLKNVMVQVQFSTEEGLV 375

Query: 736  PDEGFKVWDCAFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYHL 915
            P+EG+K W  A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY L
Sbjct: 376  PEEGYKPWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVL 435

Query: 916  LGTNLALDQMKVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKS 1095
            LGTNLALDQMKV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+
Sbjct: 436  LGTNLALDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKN 495

Query: 1096 ARKRKLRPFIQYRKIAVVVFPRPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPKSKD 1275
            ARKRKL+PF  ++KIAVV+FP+P+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKD
Sbjct: 496  ARKRKLKPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKD 555

Query: 1276 MPASDEFFDQVWFPEL 1323
            MP SDE FDQ++   L
Sbjct: 556  MPGSDEDFDQLFMDML 571


>emb|CBI23305.3| unnamed protein product [Vitis vinifera]
          Length = 1459

 Score =  605 bits (1559), Expect = e-170
 Identities = 303/425 (71%), Positives = 345/425 (81%), Gaps = 5/425 (1%)
 Frame = +1

Query: 49   LSHHSLFSMASIKRQLSPTQEQEPNSKKTKLT-----QPITMQHVTLNPADCNLDFDIEE 213
            + H   FSMASIKRQLS  + +EP SKK K       +  T Q V LNPADC+LDF+I  
Sbjct: 1    MPHLCYFSMASIKRQLS--EPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVG 58

Query: 214  NGKGGQALYEKGFAYCWSGARANVGIKNGKYIFGCKIISAQPVEMEDTPLDQQHVCRVGV 393
            +G  G AL++ GFAYCWSGAR NVGI  GKY FGCKIIS QPV+MEDTP DQQHVCR+G+
Sbjct: 59   DGLQGSALHDHGFAYCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGI 118

Query: 394  SRGDDAVGNLGETWCSFGYGGTGKFSNAGKFMNYGETFGVGDTIVCVVDLESKPLASIGF 573
            SRGDDAVGNLGET  SFG+GGTGKFS AGKF NYGE FGVGDTIVC V+LE+KPLASI F
Sbjct: 119  SRGDDAVGNLGETEHSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISF 178

Query: 574  FKNGKWLGIAKEFYAGVVDSPVGGGREWESAIFPHVLLKNVVVEMQFGVEDGLVPDEGFK 753
             KNGKWLG+AKEF AGV             A+FPHVLLKNV+V++QF  E+GLVP+EG+K
Sbjct: 179  SKNGKWLGVAKEFDAGV------------KALFPHVLLKNVMVQVQFSTEEGLVPEEGYK 226

Query: 754  VWDCAFEHGNAVMGPAFGNTKDCELMMMVGLPASGKTMWAEKWVKEHPEKRYHLLGTNLA 933
             W  A   GNA+MGP+F + +DCE+MMMVGLPASGK+ WAEKWVKEH EKRY LLGTNLA
Sbjct: 227  PWASALYDGNAIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLA 286

Query: 934  LDQMKVQGLLRKQNYGERFDRLMDRATEIFNTLLARAAKIPRNSIIDQTNVYKSARKRKL 1113
            LDQMKV GLLRKQNYGERF+RLMDRAT IFNTLL+RA+K P N IIDQTNVYK+ARKRKL
Sbjct: 287  LDQMKVPGLLRKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKL 346

Query: 1114 RPFIQYRKIAVVVFPRPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPKSKDMPASDE 1293
            +PF  ++KIAVV+FP+P+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKDMP SDE
Sbjct: 347  KPFANFQKIAVVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPGSDE 406

Query: 1294 FFDQV 1308
             FDQV
Sbjct: 407  DFDQV 411