BLASTX nr result

ID: Coptis24_contig00023327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023327
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]   107   4e-21
ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|2...    93   7e-17
ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
emb|CAX46395.1| putative EMF1 protein [Rosa lucieae]                   85   2e-14
emb|CAN71329.1| hypothetical protein VITISV_031550 [Vitis vinifera]    72   2e-10

>emb|CAN71330.1| hypothetical protein VITISV_031551 [Vitis vinifera]
          Length = 1388

 Score =  107 bits (267), Expect = 4e-21
 Identities = 87/294 (29%), Positives = 128/294 (43%), Gaps = 5/294 (1%)
 Frame = -2

Query: 868  VWSRMIPNCFPFGTSTPQKFSAQSNTTNRPYQCLELFPKGSMNGNHSLKSMDSLANHLEM 689
            VWS M PN   FG S PQ+ +  SN  +       +  K  M G   LK ++S A  LE 
Sbjct: 1018 VWSAMTPNHMAFGFSIPQECATHSNNMDMISHSSNMLHKRKMTGEQDLKFLNSNAFDLEK 1077

Query: 688  QKRNLELETSKRAHPEYPFACRDKEVQFNPLAVRPVDLY-NKEPSATHLLRLMDAGFSPS 512
            Q R++  ET  RAH EYPFAC+D  ++ +P  V  +DLY N+   A HLL LMD+G    
Sbjct: 1078 QNRSIGSETLNRAHVEYPFACKDNGIKLHPKLVGSLDLYSNENIPAMHLLSLMDSGMQSR 1137

Query: 511  TPINLEDSQRFGKQPFLARDNHQQDMR--RFGYSKNKEGLMLPPPPRCSSRNPHPVKFTG 338
            TP +++   +F K+    RD   ++      G  K +     P    C  +N    +   
Sbjct: 1138 TPFSMDGDSKFLKKSAFPRDYDSREFSGLEIGAYKARNSSRQPSSDHC-GKNHLAERSCA 1196

Query: 337  NFPSSSDVNAVGSSIPKNDFFQRKHGSRVDPLAKSLPTSPRAHLNGNAKMKEAPIQTN-- 164
               + + V A  SS  K+  F  K    +D +       PR+     +K+   PIQ    
Sbjct: 1197 CSLAVTSVGAFASSSQKDGNF--KPAGLIDQVL------PRSRGKEKSKVLPPPIQNRGC 1248

Query: 163  TLRXXXXXXXXXXXXXNLELVPRNHLPKGFLSTPDRMPFPTNSLPIKDPIKHVA 2
            T R             + E +P +   K F    + M FP     I++ I+ +A
Sbjct: 1249 TSRKSSSTCGDYSGTNH-ESIPIHDTQKRFPGASNSMRFPLQPHTIENSIECIA 1301


>ref|XP_002309551.1| predicted protein [Populus trichocarpa] gi|222855527|gb|EEE93074.1|
            predicted protein [Populus trichocarpa]
          Length = 1309

 Score = 93.2 bits (230), Expect = 7e-17
 Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
 Frame = -2

Query: 868  VWSRMIPNCFPFGTSTPQKFSAQSNTTNRPYQCLELFP-------KGSMNGNHSLKSMDS 710
            +WS M+ N  PF  + P K   QS   N       +FP       K +MNG+  LK ++ 
Sbjct: 943  LWSSMMSNHMPFVYTIPPKCVTQSTNVN-------VFPHSSGSNLKENMNGDRELKFLNK 995

Query: 709  LANHLEMQKRNLELETSKRAHPEYPFACRDKEVQFNPLAVRPVDLYNKEP-SATHLLRLM 533
             A +L  Q RN   ET  RA  EYPFA +   ++ N   +  +DLY+ E   A HLL LM
Sbjct: 996  NAANLGKQNRNFGSETLIRARSEYPFAGKHNGIELNQKPIGSLDLYSNETIPAMHLLSLM 1055

Query: 532  DAGFSPSTPINLEDSQRFGKQPFLARDNHQQDMRRFGYSKNKE-GLMLPPPPRCSSRNPH 356
            DAG   S PIN++ + +F K+P +  +   ++  R      K    +  PPP    +N  
Sbjct: 1056 DAGVQSSAPINMDVNSKFLKRPSITHNPEPKEFSRLDTGAFKAVNTVKHPPPNHHGKNQL 1115

Query: 355  PVKFTGNFPSSSDVNAVGSSIPKNDFFQRK 266
               F  + P         SS   +D   RK
Sbjct: 1116 AENFRDHIPVIQTTAGASSSSILHDKGIRK 1145


>ref|XP_002324808.1| predicted protein [Populus trichocarpa] gi|222866242|gb|EEF03373.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 60/173 (34%), Positives = 87/173 (50%), Gaps = 8/173 (4%)
 Frame = -2

Query: 871 RVWSRMIPNCFPFGTSTPQKFSAQSNTTNRPYQCLELFP-------KGSMNGNHSLKSMD 713
           ++WS M+PN  PF  S P K    S         +++FP       K +MNG+  LK  +
Sbjct: 176 QLWSSMMPNHMPFVYSIPPKCVTPSTN-------VDVFPHSPGTVLKENMNGDRVLKFPN 228

Query: 712 SLANHLEMQKRNLELETSKRAHPEYPFACRDKEVQFNPLAVRPVDLYNKEP-SATHLLRL 536
             A +L  Q RNL  ET  RAH EYPFA +   ++ N   +  ++LY+ E   A HLL L
Sbjct: 229 KNAANLGKQNRNLGSETLLRAHAEYPFAGKHNGIELNHKPMGSLELYSNETIPAMHLLSL 288

Query: 535 MDAGFSPSTPINLEDSQRFGKQPFLARDNHQQDMRRFGYSKNKEGLMLPPPPR 377
           MDAG   S PIN++ + +F K+P +  +   ++  R      K    +  PPR
Sbjct: 289 MDAGVQSSAPINMDVNPKFLKRPAIIHNAEPKEFSRLDTGAYKVISSVKHPPR 341


>emb|CAX46395.1| putative EMF1 protein [Rosa lucieae]
          Length = 483

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 78/294 (26%), Positives = 117/294 (39%), Gaps = 7/294 (2%)
 Frame = -2

Query: 868  VWSRMIPNCFPFGTSTPQKFSAQSNTTNRPYQCLELFPKGSMNGNHSLKSMDSLANHLEM 689
            +WS +I    PF    PQK  AQS+      Q      KG+  G+  L S++  A + E 
Sbjct: 170  LWSPVISAHMPFAYENPQKGPAQSSNVKMVSQSPGSLQKGNATGDCDL-SLNLNAPNFEK 228

Query: 688  QKRNLELETSKRAHPEYPFACRDKEVQFNPLAVRPVDLYNKEP-SATHLLRLMDAGFSPS 512
            +   +  ET  R +PEY F C+    + +  ++  +DLY+ E   A HLL LMDAG    
Sbjct: 229  RNEAVGSETISRTNPEYSFTCKRNGTEPHQNSLGSLDLYSNETIPAMHLLSLMDAGMRSG 288

Query: 511  TPINLEDSQRFGKQPFLARDNHQQDMRRFGYSKNKEGL------MLPPPPRCSSRNPHPV 350
              +N+  + +F K+PF        D+   GY     GL      +  P   C  +N    
Sbjct: 289  ASLNMGGNPKFPKRPF------PNDLNSKGYPGLDIGLYKAADTVNHPSSNCYGKNHLSE 342

Query: 349  KFTGNFPSSSDVNAVGSSIPKNDFFQRKHGSRVDPLAKSLPTSPRAHLNGNAKMKEAPIQ 170
            K    FP++    A  SS     F   K   R       + +S +       +   +P Q
Sbjct: 343  KSLDLFPTNPTFGASSSS-----FEHSKSFGRATDFMDQVSSSQKKE---KIQRSHSPAQ 394

Query: 169  TNTLRXXXXXXXXXXXXXNLELVPRNHLPKGFLSTPDRMPFPTNSLPIKDPIKH 8
                R             N   +P + +PKGFL     + FP +   I +  KH
Sbjct: 395  NRGPRSQKSLAADGGFGNNRTTIPVHSIPKGFLPVSGPLMFPLHYHTIANSRKH 448


>emb|CAN71329.1| hypothetical protein VITISV_031550 [Vitis vinifera]
          Length = 888

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 48/148 (32%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
 Frame = -2

Query: 865  WSRMIPNCFPFGTSTPQKFSAQSNTTNRPYQCLELFPKGSMNGNHSLKSMDSLANHLEMQ 686
            W  M PN   FG S PQ+ +   N  N       +  K   NG   LK            
Sbjct: 751  WFTMTPNHMAFGFSIPQECATHPNNMNMISHSSNMLHKRKTNGVKDLK------------ 798

Query: 685  KRNLELETSKRAHPEYPFACRDKEVQFNPLAVRPVDLYNKE-PSATHLLRLMDAGFSPST 509
                       AH EYPFAC D  ++ +P  +  +DLY+KE   A HLL LMD+G   S 
Sbjct: 799  -----------AHVEYPFACNDNGIKLHPKLMGSLDLYSKENKPAMHLLSLMDSGTKSSN 847

Query: 508  PINLEDSQRFGKQPFLARDNHQQDMRRF 425
              ++E+  +F K+    RD    D R F
Sbjct: 848  XFSMEEDSKFLKKSAFPRD---YDSREF 872


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