BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023316
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28998.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08
gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]         57   1e-06
dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protei...    57   2e-06
ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group] g...    57   2e-06

>emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = +1

Query: 1   PKNDAAYVLLSNLYTQEGSWDAAAKVGSKMLEKGVTKNPGYSSVEV 138
           P+NDAAYVLLS +Y++EGSW  AAKV   M+E+G+ K+PG S +E+
Sbjct: 687 PENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 732


>ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = +1

Query: 1   PKNDAAYVLLSNLYTQEGSWDAAAKVGSKMLEKGVTKNPGYSSVEV 138
           P+NDAAYVLLS +Y++EGSW  AAKV   M+E+G+ K+PG S +E+
Sbjct: 663 PENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 708


>gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
          Length = 496

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = +1

Query: 1   PKNDAAYVLLSNLYTQEGSWDAAAKVGSKMLEKGVTKNPGYSSVEV 138
           P+ DA YVLLSN+Y   G WD A KV S M  +GV K PG+S+VE+
Sbjct: 404 PQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSTVEI 449


>dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group] gi|215704291|dbj|BAG93131.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 527

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = +1

Query: 1   PKNDAAYVLLSNLYTQEGSWDAAAKVGSKMLEKGVTKNPGYSSVEV 138
           P  DA YVLLSN+Y   G WD A KV S M  +G+ K PGYS+VE+
Sbjct: 436 PGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEI 481


>ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
           gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza
           sativa Japonica Group]
          Length = 438

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/46 (56%), Positives = 31/46 (67%)
 Frame = +1

Query: 1   PKNDAAYVLLSNLYTQEGSWDAAAKVGSKMLEKGVTKNPGYSSVEV 138
           P  DA YVLLSN+Y   G WD A KV S M  +G+ K PGYS+VE+
Sbjct: 347 PGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAVEI 392