BLASTX nr result
ID: Coptis24_contig00023306
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023306 (313 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Br... 69 3e-12 gb|ABK95163.1| unknown [Populus trichocarpa] 67 5e-12 ref|XP_002307574.1| predicted protein [Populus trichocarpa] gi|2... 67 5e-12 gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays] g... 67 6e-12 gb|ADG43164.1| auxin response factor 30 [Zea mays] 67 6e-12 >ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon] Length = 934 Score = 68.6 bits (166), Expect(2) = 3e-12 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 4/94 (4%) Frame = -3 Query: 272 TNKEIDGRIPNYPNLPPQLICQLHNVTMHISLML*LTHKSICIEIWVMILSEDDSSNPHL 93 TNKE+DG+IPNYPNLPPQLICQLHNVTMH + + ++ + LS ++ P L Sbjct: 100 TNKEVDGQIPNYPNLPPQLICQLHNVTMHAD----VETDEVYAQMTLQPLSPEEQKEPFL 155 Query: 92 LVLV----QHPANLYAANGAAVVLAEKGQFDVSK 3 + + + P N + A + G F V + Sbjct: 156 PIELGAASKQPTNYFCKTLTASDTSTHGGFSVPR 189 Score = 27.7 bits (60), Expect(2) = 3e-12 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = -2 Query: 312 VYFPQGHSEQV 280 +YFPQGHSEQV Sbjct: 86 IYFPQGHSEQV 96 >gb|ABK95163.1| unknown [Populus trichocarpa] Length = 907 Score = 67.4 bits (163), Expect(2) = 5e-12 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 5/95 (5%) Frame = -3 Query: 272 TNKEIDGRIPNYPNLPPQLICQLHNVTMHISLML*LTHKSICIEIWVMILSEDDSSNPHL 93 TNKE+D IPNYP+LPPQLICQLHNVTMH + + ++ + LS+DD + +L Sbjct: 61 TNKEVDAHIPNYPSLPPQLICQLHNVTMHAD----VETDEVYAQMTLQPLSQDDQKDAYL 116 Query: 92 L-----VLVQHPANLYAANGAAVVLAEKGQFDVSK 3 L + P N + A + G F V + Sbjct: 117 LPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPR 151 Score = 28.1 bits (61), Expect(2) = 5e-12 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -2 Query: 312 VYFPQGHSEQV 280 VYFPQGHSEQV Sbjct: 47 VYFPQGHSEQV 57 >ref|XP_002307574.1| predicted protein [Populus trichocarpa] gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa] Length = 372 Score = 67.4 bits (163), Expect(2) = 5e-12 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 5/95 (5%) Frame = -3 Query: 272 TNKEIDGRIPNYPNLPPQLICQLHNVTMHISLML*LTHKSICIEIWVMILSEDDSSNPHL 93 TNKE+D IPNYP+LPPQLICQLHNVTMH + + ++ + LS+DD + +L Sbjct: 42 TNKEVDAHIPNYPSLPPQLICQLHNVTMHAD----VETDEVYAQMTLQPLSQDDQKDAYL 97 Query: 92 L-----VLVQHPANLYAANGAAVVLAEKGQFDVSK 3 L + P N + A + G F V + Sbjct: 98 LPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPR 132 Score = 28.1 bits (61), Expect(2) = 5e-12 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -2 Query: 312 VYFPQGHSEQV 280 VYFPQGHSEQV Sbjct: 28 VYFPQGHSEQV 38 >gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays] gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays] Length = 834 Score = 67.0 bits (162), Expect(2) = 6e-12 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Frame = -3 Query: 272 TNKEIDGRIPNYPNLPPQLICQLHNVTMHISLML*LTHKSICIEIWVMILSEDDSSNPHL 93 TNKE+DG IPNYPNLPPQLICQLH+VTMH + + ++ + L+ + ++P+L Sbjct: 58 TNKEVDGHIPNYPNLPPQLICQLHDVTMHAD----VETDEVYAQMTLQPLNPQEQNDPYL 113 Query: 92 L----VLVQHPANLYAANGAAVVLAEKGQFDVSK 3 ++ + P N + A + G F V + Sbjct: 114 PAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPR 147 Score = 28.1 bits (61), Expect(2) = 6e-12 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -2 Query: 312 VYFPQGHSEQV 280 VYFPQGHSEQV Sbjct: 44 VYFPQGHSEQV 54 >gb|ADG43164.1| auxin response factor 30 [Zea mays] Length = 809 Score = 67.0 bits (162), Expect(2) = 6e-12 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Frame = -3 Query: 272 TNKEIDGRIPNYPNLPPQLICQLHNVTMHISLML*LTHKSICIEIWVMILSEDDSSNPHL 93 TNKE+DG IPNYPNLPPQLICQLH+VTMH + + ++ + L+ + ++P+L Sbjct: 58 TNKEVDGHIPNYPNLPPQLICQLHDVTMHAD----VETDEVYAQMTLQPLNPQEQNDPYL 113 Query: 92 L----VLVQHPANLYAANGAAVVLAEKGQFDVSK 3 ++ + P N + A + G F V + Sbjct: 114 PAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPR 147 Score = 28.1 bits (61), Expect(2) = 6e-12 Identities = 11/11 (100%), Positives = 11/11 (100%) Frame = -2 Query: 312 VYFPQGHSEQV 280 VYFPQGHSEQV Sbjct: 44 VYFPQGHSEQV 54