BLASTX nr result

ID: Coptis24_contig00023302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023302
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002468690.1| hypothetical protein SORBIDRAFT_01g050336 [S...    50   7e-08
ref|XP_002437011.1| hypothetical protein SORBIDRAFT_10g017170 [S...    50   7e-08
ref|XP_002444425.1| hypothetical protein SORBIDRAFT_07g021740 [S...    50   7e-08
ref|XP_002463777.1| hypothetical protein SORBIDRAFT_01g005980 [S...    50   7e-08
ref|XP_002464746.1| hypothetical protein SORBIDRAFT_01g026320 [S...    50   7e-08

>ref|XP_002468690.1| hypothetical protein SORBIDRAFT_01g050336 [Sorghum bicolor]
            gi|241922544|gb|EER95688.1| hypothetical protein
            SORBIDRAFT_01g050336 [Sorghum bicolor]
          Length = 1834

 Score = 50.1 bits (118), Expect(2) = 7e-08
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = -3

Query: 316  PQEVVQLPSAIQKCRDIQELISSVYPQLGQQSKTDQNFLTERTILSARNDDVAVINSAAL 137
            P E+  +P +    +D+  LI S++P L   +  D++++T R ILS RND V +IN   +
Sbjct: 1393 PDEIC-IPYSGDAEKDLHSLIDSIFPNLNA-NMADKDYITTRAILSTRNDWVDMINMKMI 1450

Query: 136  DLFRGEPIVYLAADRQV 86
            D+F+G   VY + D  V
Sbjct: 1451 DMFQGGETVYHSFDTAV 1467



 Score = 31.2 bits (69), Expect(2) = 7e-08
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 51   NRYPNEYLNSLDPSGLP 1
            N YP+E+LNSL P+GLP
Sbjct: 1472 NYYPSEFLNSLTPNGLP 1488


>ref|XP_002437011.1| hypothetical protein SORBIDRAFT_10g017170 [Sorghum bicolor]
            gi|241915234|gb|EER88378.1| hypothetical protein
            SORBIDRAFT_10g017170 [Sorghum bicolor]
          Length = 1381

 Score = 50.1 bits (118), Expect(2) = 7e-08
 Identities = 25/63 (39%), Positives = 38/63 (60%)
 Frame = -3

Query: 274  RDIQELISSVYPQLGQQSKTDQNFLTERTILSARNDDVAVINSAALDLFRGEPIVYLAAD 95
            +D+  LI S++P L   +  D+ ++T R ILS RND V +IN   +D+F+G   VY + D
Sbjct: 1162 KDLHSLIDSIFPNLNA-NMADKGYITTRAILSTRNDWVDIINMKMIDMFQGGETVYHSFD 1220

Query: 94   RQV 86
              V
Sbjct: 1221 TAV 1223



 Score = 31.2 bits (69), Expect(2) = 7e-08
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 51   NRYPNEYLNSLDPSGLP 1
            N YP+E+LNSL P+GLP
Sbjct: 1228 NYYPSEFLNSLTPNGLP 1244


>ref|XP_002444425.1| hypothetical protein SORBIDRAFT_07g021740 [Sorghum bicolor]
            gi|241940775|gb|EES13920.1| hypothetical protein
            SORBIDRAFT_07g021740 [Sorghum bicolor]
          Length = 1124

 Score = 50.1 bits (118), Expect(2) = 7e-08
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = -3

Query: 316  PQEVVQLPSAIQKCRDIQELISSVYPQLGQQSKTDQNFLTERTILSARNDDVAVINSAAL 137
            P E+  +P +    +D+  LI S++P L   +  D++++T R ILS RND V +IN   +
Sbjct: 837  PDEIC-IPYSGDAEKDLHSLIDSIFPNLNA-NMADKDYITTRAILSTRNDWVDMINMKMI 894

Query: 136  DLFRGEPIVYLAADRQV 86
            D+F+G   VY + D  V
Sbjct: 895  DMFQGGETVYHSFDTAV 911



 Score = 31.2 bits (69), Expect(2) = 7e-08
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 51  NRYPNEYLNSLDPSGLP 1
           N YP+E+LNSL P+GLP
Sbjct: 916 NYYPSEFLNSLTPNGLP 932


>ref|XP_002463777.1| hypothetical protein SORBIDRAFT_01g005980 [Sorghum bicolor]
            gi|241917631|gb|EER90775.1| hypothetical protein
            SORBIDRAFT_01g005980 [Sorghum bicolor]
          Length = 1124

 Score = 50.1 bits (118), Expect(2) = 7e-08
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = -3

Query: 316  PQEVVQLPSAIQKCRDIQELISSVYPQLGQQSKTDQNFLTERTILSARNDDVAVINSAAL 137
            P E+  +P +    +D+  LI S++P L   +  D++++T R ILS RND V +IN   +
Sbjct: 837  PDEIC-IPYSGDAEKDLHSLIDSIFPNLNA-NMADKDYITTRAILSTRNDWVDMINMKMI 894

Query: 136  DLFRGEPIVYLAADRQV 86
            D+F+G   VY + D  V
Sbjct: 895  DMFQGGETVYHSFDTAV 911



 Score = 31.2 bits (69), Expect(2) = 7e-08
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 51  NRYPNEYLNSLDPSGLP 1
           N YP+E+LNSL P+GLP
Sbjct: 916 NYYPSEFLNSLTPNGLP 932


>ref|XP_002464746.1| hypothetical protein SORBIDRAFT_01g026320 [Sorghum bicolor]
            gi|241918600|gb|EER91744.1| hypothetical protein
            SORBIDRAFT_01g026320 [Sorghum bicolor]
          Length = 1075

 Score = 50.1 bits (118), Expect(2) = 7e-08
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = -3

Query: 316  PQEVVQLPSAIQKCRDIQELISSVYPQLGQQSKTDQNFLTERTILSARNDDVAVINSAAL 137
            P E+  +P +    +D+  LI S++P L   +  D++++T R ILS RND V +IN   +
Sbjct: 822  PDEIC-IPYSGDAEKDLHSLIDSIFPNLNA-NMADKDYITTRAILSTRNDWVDMINMKMI 879

Query: 136  DLFRGEPIVYLAADRQV 86
            D+F+G   VY + D  V
Sbjct: 880  DMFQGGETVYHSFDTAV 896



 Score = 31.2 bits (69), Expect(2) = 7e-08
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 51  NRYPNEYLNSLDPSGLP 1
           N YP+E+LNSL P+GLP
Sbjct: 901 NYYPSEFLNSLTPNGLP 917


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