BLASTX nr result

ID: Coptis24_contig00023292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023292
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285886.1| PREDICTED: probable calcium-binding protein ...   145   8e-33
ref|XP_002520298.1| calcium binding protein/cast, putative [Rici...   145   8e-33
ref|NP_001236132.1| uncharacterized protein LOC100500561 [Glycin...   142   7e-32
ref|XP_002306659.1| predicted protein [Populus trichocarpa] gi|2...   141   9e-32
ref|XP_002302215.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_002285886.1| PREDICTED: probable calcium-binding protein CML44-like [Vitis
           vinifera]
          Length = 162

 Score =  145 bits (365), Expect = 8e-33
 Identities = 79/157 (50%), Positives = 97/157 (61%)
 Frame = -2

Query: 547 LKSSDLHKIFAKLDQNGDGHVSVEELRCFLAKVDVQIGLEELQAIVGREKFDLEEFILFC 368
           L S DLH+IF KLD+NGDG VS+ EL   L +V VQ  L+EL+++VG    D  EF++F 
Sbjct: 6   LSSIDLHRIFHKLDRNGDGLVSLGELNWLLERVGVQYSLDELESLVGNTTLDFNEFLVFY 65

Query: 367 ETIYKKXXXXXXXXXXXXXXXXXXXXXXXXDLVGAFKVFDINSDGFISSDELQCVLSRLG 188
           E+I  +                         L  AF+VFD+N DGFI+ DELQ VLSRLG
Sbjct: 66  ESISTEKKGESEVEEEEVKEEEEEEDVGD--LAKAFRVFDLNGDGFITCDELQSVLSRLG 123

Query: 187 LWEERSGCDCTRMIYEFDINSDGVLDFEEFKKMMLLT 77
           +WEE  G DC  MI  +D NSDGVLDFEEFK MMLL+
Sbjct: 124 MWEENGGGDCRSMIKVYDTNSDGVLDFEEFKNMMLLS 160


>ref|XP_002520298.1| calcium binding protein/cast, putative [Ricinus communis]
           gi|223540517|gb|EEF42084.1| calcium binding
           protein/cast, putative [Ricinus communis]
          Length = 165

 Score =  145 bits (365), Expect = 8e-33
 Identities = 82/163 (50%), Positives = 97/163 (59%), Gaps = 3/163 (1%)
 Frame = -2

Query: 556 MCLLKSSDLHKIFAKLDQNGDGHVSVEELRCFLAKVDVQIGLEELQAIVGREKFDLEEFI 377
           MC L + DLH+IF KLD+NGDG +S+ EL   L K+ V    EEL+  VG+   D  EF+
Sbjct: 1   MCPLITRDLHRIFQKLDKNGDGLLSIGELNWLLEKIGVHFSPEELEGSVGKSSLDFNEFL 60

Query: 376 LFCETIYK---KXXXXXXXXXXXXXXXXXXXXXXXXDLVGAFKVFDINSDGFISSDELQC 206
           LF ++I +                            DL  AF VFDIN DGFISS+ELQ 
Sbjct: 61  LFYDSITECSYGAGGEEEEDEVVVEEEEEGSNKELEDLAKAFNVFDINGDGFISSEELQS 120

Query: 205 VLSRLGLWEERSGCDCTRMIYEFDINSDGVLDFEEFKKMMLLT 77
           VL+RLGLW+E SG DCT MI  FD N DGVLDFEEFK MML T
Sbjct: 121 VLARLGLWDEMSGKDCTSMICAFDTNLDGVLDFEEFKNMMLQT 163


>ref|NP_001236132.1| uncharacterized protein LOC100500561 [Glycine max]
           gi|255630633|gb|ACU15676.1| unknown [Glycine max]
          Length = 163

 Score =  142 bits (357), Expect = 7e-32
 Identities = 76/161 (47%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
 Frame = -2

Query: 556 MCLLKSSDLHKIFAKLDQNGDGHVSVEELRCFLAKVDVQIGLEELQAIVGREKFDLEEFI 377
           MC L  SDL +IF K+D NGDG +S+EEL+  L K      +EEL+++VG++  D  EF+
Sbjct: 1   MCPLTPSDLLRIFEKVDMNGDGFLSLEELKMLLEKTGFGYSIEELESLVGKKSLDFSEFL 60

Query: 376 LFCETIYKKXXXXXXXXXXXXXXXXXXXXXXXXDLVGAFKVFDINSDGFISSDELQCVLS 197
            F E+  K+                        DLV AFKVFD++ DGFI+S EL+CVL 
Sbjct: 61  FFYESRLKQNNNGEKELGASGGDDSDEVEEVERDLVKAFKVFDLDDDGFITSQELECVLK 120

Query: 196 RLGLW-EERSGCDCTRMIYEFDINSDGVLDFEEFKKMMLLT 77
           RLG+W +ER G DC  MI  +D N DG LDF+EFK MMLLT
Sbjct: 121 RLGMWDDERCGKDCASMICSYDTNFDGKLDFQEFKGMMLLT 161


>ref|XP_002306659.1| predicted protein [Populus trichocarpa] gi|222856108|gb|EEE93655.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score =  141 bits (356), Expect = 9e-32
 Identities = 79/161 (49%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
 Frame = -2

Query: 556 MCLLKSSDLHKIFAKLDQNGDGHVSVEELRCFLAKVD-VQIGLEELQAIVGREKFDLEEF 380
           MCLLK++DLH+IF +LD+NGDG +S  EL   L  +  V   LEEL++ VG+   + +EF
Sbjct: 1   MCLLKTNDLHRIFQELDRNGDGLLSAVELNWLLESIGGVHFSLEELESSVGKSCLNFDEF 60

Query: 379 ILFCETIYKKXXXXXXXXXXXXXXXXXXXXXXXXDLVGAFKVFDINSDGFISSDELQCVL 200
           +LF ++I K+                         LV AF+VFD N DGFIS +ELQ +L
Sbjct: 61  LLFYDSITKQSGGGNSEAVVADDQEGCNREDCD--LVKAFQVFDSNGDGFISIEELQSML 118

Query: 199 SRLGLWEERSGCDCTRMIYEFDINSDGVLDFEEFKKMMLLT 77
           SRLGLW+E +G DC  MI  +D N DGVLDFEEFKKMML T
Sbjct: 119 SRLGLWDETTGKDCRSMICRYDTNLDGVLDFEEFKKMMLHT 159


>ref|XP_002302215.1| predicted protein [Populus trichocarpa] gi|222843941|gb|EEE81488.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  139 bits (351), Expect = 3e-31
 Identities = 75/160 (46%), Positives = 98/160 (61%)
 Frame = -2

Query: 556 MCLLKSSDLHKIFAKLDQNGDGHVSVEELRCFLAKVDVQIGLEELQAIVGREKFDLEEFI 377
           MC LK++DLH+IF +LD+NGDG +S  EL   L  + V   LEEL++ VG+     +EF 
Sbjct: 1   MCPLKTNDLHRIFHELDKNGDGLLSTVELNWLLESIGVHFSLEELESSVGKSCLSFDEFS 60

Query: 376 LFCETIYKKXXXXXXXXXXXXXXXXXXXXXXXXDLVGAFKVFDINSDGFISSDELQCVLS 197
           LF ++I K+                         L  AFKVFD N DGFIS +ELQ +LS
Sbjct: 61  LFYDSITKQSDDPSNKAVLADDEEGRNKEECD--LFEAFKVFDSNGDGFISCEELQSLLS 118

Query: 196 RLGLWEERSGCDCTRMIYEFDINSDGVLDFEEFKKMMLLT 77
           +LGLW+E++G DC  M+  +D N DGV+DFEEFKKMML T
Sbjct: 119 KLGLWDEKTGKDCRSMLCRYDTNLDGVVDFEEFKKMMLRT 158


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