BLASTX nr result

ID: Coptis24_contig00023289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023289
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...   137   2e-36
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...   130   2e-36
ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258...   132   1e-35
ref|XP_002276393.1| PREDICTED: uncharacterized protein LOC100240...   128   5e-35
ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...   130   3e-34

>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score =  137 bits (344), Expect(2) = 2e-36
 Identities = 65/163 (39%), Positives = 108/163 (66%)
 Frame = +2

Query: 266 RFKGTVKDVLGRGFDPSRTMFTYALCVLSGMSKAKKRKKFGVFRSFGWADDQIHLAFRNQ 445
           RF  TVK V+  GFDP   +F  A+ V  GMSK+   +K  V+R +GW++D+I L FR  
Sbjct: 233 RFGETVKKVMEMGFDPLTVVFIKAIQVFGGMSKSTWEQKMEVYRRWGWSNDEIVLLFRAF 292

Query: 446 PTCLDISEEKLRTGLNFFMNIKSWEAAQLAKAPNVLGLSMKKRVIPRLTVIEFLVSKSLI 625
           P C+ +SE+K+ + ++F +N   W+  ++ + P  LG +++KR+IPR  V + L+ K L+
Sbjct: 293 PACMSLSEKKIMSTMDFLVNKMGWKLTEITRFPISLGFNLEKRIIPRCWVGKVLMLKGLV 352

Query: 626 KKDVRIVSSLLISDAKFMEKFVAKYGDKVPELIKLYHGEV*LV 754
           KKD+ + + L  +++KF+++FV KY + +P+L+ LY GEV +V
Sbjct: 353 KKDLSLGAFLRYTESKFLDRFVIKYQNHIPQLLNLYKGEVGVV 395



 Score = 42.4 bits (98), Expect(2) = 2e-36
 Identities = 28/73 (38%), Positives = 38/73 (52%)
 Frame = +3

Query: 18  PFYFYISLQHRIIPSLHFLKTFLKTDENVRLAIKKCFFIHILGWNPEKSLTPKIKVLQDH 197
           P     SL ++IIP  +F K+ L  D  V  AIK+   I +   N  K++ P I  LQ+ 
Sbjct: 152 PMILSRSLDNQIIPCYNFFKSILHLDNRVVSAIKRSPRIFLEDVN--KNIVPNITALQEI 209

Query: 198 GVPEPNISNLFFY 236
           GVPE +I  L  Y
Sbjct: 210 GVPESSIVFLITY 222


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  130 bits (327), Expect(2) = 2e-36
 Identities = 64/164 (39%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
 Frame = +2

Query: 257 DNTRFKGTVKDVLGRGFDPSRTMFTYALCVLSGM-SKAKKRKKFGVFRSFGWADDQIHLA 433
           ++  F   V++V   GFDP+++ F  A+  L G  +K+   + F V++ +GW  D I  A
Sbjct: 232 NHEEFSENVEEVRKMGFDPNKSTFVLAVHALCGKCNKSIWERCFEVYKRWGWTKDDILSA 291

Query: 434 FRNQPTCLDISEEKLRTGLNFFMNIKSWEAAQLAKAPNVLGLSMKKRVIPRLTVIEFLVS 613
           FR  P C+ +SE+K+  GL+FF+N   W + ++   P +L LS++KR+IPR  VI+ L S
Sbjct: 292 FRKHPHCMMLSEKKIMKGLDFFVNKMGWPSKEIVHCPVILFLSLEKRIIPRCKVIQVLWS 351

Query: 614 KSLIKKDVRIVSSLLISDAKFMEKFVAKYGDKVPELIKLYHGEV 745
           K LIKKD+ + + LL  + +F+E+FV K+ ++VP+L+ +Y G+V
Sbjct: 352 KGLIKKDISLNTVLLPVEKRFLERFVTKFEEEVPQLLSVYEGKV 395



 Score = 48.5 bits (114), Expect(2) = 2e-36
 Identities = 28/74 (37%), Positives = 46/74 (62%)
 Frame = +3

Query: 6   LLQDPFYFYISLQHRIIPSLHFLKTFLKTDENVRLAIKKCFFIHILGWNPEKSLTPKIKV 185
           L  DP     SL+++I+PS +FLKT L++DE +  A K+  +I +   +  K+L P +++
Sbjct: 150 LSSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTWIFL--EDLSKNLIPNLEL 207

Query: 186 LQDHGVPEPNISNL 227
           L+  GVP+  IS L
Sbjct: 208 LRKVGVPQSCISLL 221


>ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258309 [Vitis vinifera]
           gi|297744182|emb|CBI37152.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score =  132 bits (332), Expect(2) = 1e-35
 Identities = 62/162 (38%), Positives = 105/162 (64%)
 Frame = +2

Query: 260 NTRFKGTVKDVLGRGFDPSRTMFTYALCVLSGMSKAKKRKKFGVFRSFGWADDQIHLAFR 439
           N +F   VK+V+  GFDP + +F  A+ V +GMSK+   +K  V+R +G  + +I L FR
Sbjct: 233 NDKFHEIVKEVMESGFDPLKMVFITAIQVFAGMSKSTWEQKMEVYRRWGLTNHEIMLLFR 292

Query: 440 NQPTCLDISEEKLRTGLNFFMNIKSWEAAQLAKAPNVLGLSMKKRVIPRLTVIEFLVSKS 619
             P C+ +SE K+ + ++F +N   W+ + + + P  LG S++KR+IPR +V + L+ K 
Sbjct: 293 GFPLCMSLSENKIMSTVDFLVNKMGWKLSAIIRVPITLGYSLEKRIIPRCSVGKVLILKG 352

Query: 620 LIKKDVRIVSSLLISDAKFMEKFVAKYGDKVPELIKLYHGEV 745
           L+KKD+ + + L +++ KF ++FV KY + +P+L+ LY GEV
Sbjct: 353 LVKKDLSLGAFLKLTEKKFFDRFVIKYQNHIPQLLNLYKGEV 394



 Score = 44.3 bits (103), Expect(2) = 1e-35
 Identities = 27/72 (37%), Positives = 42/72 (58%)
 Frame = +3

Query: 3   LLLQDPFYFYISLQHRIIPSLHFLKTFLKTDENVRLAIKKCFFIHILGWNPEKSLTPKIK 182
           +L   P     SL ++IIP  +FLK+ L+ D+ V  A K+     IL  N +K++ PKI 
Sbjct: 149 ILSSCPLILSRSLDNQIIPCHNFLKSILRLDKTVVSACKRS--PRILLENVKKNIVPKIT 206

Query: 183 VLQDHGVPEPNI 218
            LQ+ GVP+ ++
Sbjct: 207 ALQEIGVPQSSV 218


>ref|XP_002276393.1| PREDICTED: uncharacterized protein LOC100240766 [Vitis vinifera]
          Length = 384

 Score =  128 bits (322), Expect(2) = 5e-35
 Identities = 60/159 (37%), Positives = 104/159 (65%)
 Frame = +2

Query: 269 FKGTVKDVLGRGFDPSRTMFTYALCVLSGMSKAKKRKKFGVFRSFGWADDQIHLAFRNQP 448
           F+  +++V   GFDPS+T F  A+  ++GMSK+   +K   ++ +GW+++ I LAF   P
Sbjct: 222 FREILEEVKKMGFDPSKTRFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSP 281

Query: 449 TCLDISEEKLRTGLNFFMNIKSWEAAQLAKAPNVLGLSMKKRVIPRLTVIEFLVSKSLIK 628
            C+  SE+K+   ++FF+N    E++ +A  P ++GLS++KR+IPR +V++ L+SK LI 
Sbjct: 282 WCMIYSEDKIMATMDFFVNKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLID 341

Query: 629 KDVRIVSSLLISDAKFMEKFVAKYGDKVPELIKLYHGEV 745
           KD+ +V     ++  F+EKFV  Y ++ P+L+ LY  +V
Sbjct: 342 KDISLVVLFESTEKMFLEKFVNGYKEEAPQLLNLYQEKV 380



 Score = 45.8 bits (107), Expect(2) = 5e-35
 Identities = 26/72 (36%), Positives = 40/72 (55%)
 Frame = +3

Query: 36  SLQHRIIPSLHFLKTFLKTDENVRLAIKKCFFIHILGWNPEKSLTPKIKVLQDHGVPEPN 215
           SL+++IIPS +F K F +++E     +K+  F  +L  NP   +   I  LQ+ GVP+ N
Sbjct: 146 SLENQIIPSFNFFKDFFQSEEVTMATVKR--FSRVLIVNPHICVESNINALQESGVPKSN 203

Query: 216 ISNLFFYGFRGF 251
           I+ L     R F
Sbjct: 204 IAALLSLQPRAF 215


>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score =  130 bits (326), Expect(2) = 3e-34
 Identities = 61/160 (38%), Positives = 103/160 (64%)
 Frame = +2

Query: 266 RFKGTVKDVLGRGFDPSRTMFTYALCVLSGMSKAKKRKKFGVFRSFGWADDQIHLAFRNQ 445
           +F   VK+V+  GFDP + +F  A+ VL+GMSK     K  V+R +G ++ +I L FR  
Sbjct: 235 KFHEIVKEVMEMGFDPLKMVFIKAIHVLAGMSKPTWEHKMEVYRRWGLSNHEIMLLFRAF 294

Query: 446 PTCLDISEEKLRTGLNFFMNIKSWEAAQLAKAPNVLGLSMKKRVIPRLTVIEFLVSKSLI 625
           P C+ +SE+K+ + ++F +N   W+   + K P+ L  S++KR+IPR +V   L+ K L+
Sbjct: 295 PICMSLSEKKIMSTMDFLVNKMGWKLTAITKVPSTLSYSLEKRIIPRCSVARVLILKGLV 354

Query: 626 KKDVRIVSSLLISDAKFMEKFVAKYGDKVPELIKLYHGEV 745
           KKD+ + + L  ++ KF+++FV KY + +P+L+ L+ GEV
Sbjct: 355 KKDMGLGAFLRFTEKKFLDRFVIKYQNHIPQLLNLFKGEV 394



 Score = 41.6 bits (96), Expect(2) = 3e-34
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = +3

Query: 3   LLLQDPFYFYISLQHRIIPSLHFLKTFLKTDENVRLAIKKCFFIHILGWNPEKSLTPKIK 182
           +L   P     SL ++IIP   FLK+ L  D+ V  A K+   I +   N  K + PKI 
Sbjct: 149 ILSSCPMILSRSLDYQIIPCYDFLKSILHLDKRVVSAFKRSPRIFLEDVN--KYIVPKIT 206

Query: 183 VLQDHGVPEPNI 218
            LQ+ GVPE ++
Sbjct: 207 ALQEIGVPESSV 218


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