BLASTX nr result

ID: Coptis24_contig00023283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023283
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270017.1| PREDICTED: uncharacterized protein LOC100265...   249   7e-64
ref|XP_003633766.1| PREDICTED: uncharacterized protein LOC100265...   243   6e-62
ref|XP_002298631.1| predicted protein [Populus trichocarpa] gi|2...   231   3e-58
ref|NP_001238689.1| uncharacterized protein LOC100527867 [Glycin...   221   2e-55
ref|XP_002509509.1| conserved hypothetical protein [Ricinus comm...   218   2e-54

>ref|XP_002270017.1| PREDICTED: uncharacterized protein LOC100265298 isoform 1 [Vitis
           vinifera] gi|296082341|emb|CBI21346.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  249 bits (636), Expect = 7e-64
 Identities = 122/170 (71%), Positives = 144/170 (84%)
 Frame = +1

Query: 181 NAGMLSREQLVHIFNRFSFLTSQPDVKKRISDAVKDKQEAVAITTAIQEEILLEMGIDPR 360
           N+GMLSR+QL+H+FNRFSFLTSQPDVKKRI+DAV+DKQEAVA+TTAIQEEI  EMGIDPR
Sbjct: 7   NSGMLSRDQLLHLFNRFSFLTSQPDVKKRIADAVEDKQEAVAVTTAIQEEIFSEMGIDPR 66

Query: 361 FGIACLGKVNMVYENDSDLMIKFYGFVAKEEMACXXXXXXXXXXXXKVCIQHMLHEQQLE 540
           FGIACLGKVNMVYEND DLM++FY FVAKEE+AC            ++  QH L EQQLE
Sbjct: 67  FGIACLGKVNMVYENDQDLMLRFYKFVAKEEVACEEAELGPDEFAERIHAQHKLQEQQLE 126

Query: 541 MLKHMRKFHPDDQSAILEELRRQMENANFDNSAAVLTTESIQDIVRRRIS 690
           MLKHMRKFH DDQS ILE+LR+QME ANF++  ++L++E IQ+IVRRR+S
Sbjct: 127 MLKHMRKFHLDDQSVILEKLRQQMEKANFESEPSILSSEQIQEIVRRRVS 176


>ref|XP_003633766.1| PREDICTED: uncharacterized protein LOC100265298 isoform 2 [Vitis
           vinifera]
          Length = 189

 Score =  243 bits (619), Expect = 6e-62
 Identities = 122/177 (68%), Positives = 144/177 (81%), Gaps = 7/177 (3%)
 Frame = +1

Query: 181 NAGMLSREQLVHIFNRFSFLTSQPDVKKRISDAVKDKQEAVAITTAIQEEILLEMGIDPR 360
           N+GMLSR+QL+H+FNRFSFLTSQPDVKKRI+DAV+DKQEAVA+TTAIQEEI  EMGIDPR
Sbjct: 7   NSGMLSRDQLLHLFNRFSFLTSQPDVKKRIADAVEDKQEAVAVTTAIQEEIFSEMGIDPR 66

Query: 361 FGIACLGKVNMVYENDSDLMIKFYGFVAKEEMACXXXXXXXXXXXXKVCIQHMLHEQQLE 540
           FGIACLGKVNMVYEND DLM++FY FVAKEE+AC            ++  QH L EQQLE
Sbjct: 67  FGIACLGKVNMVYENDQDLMLRFYKFVAKEEVACEEAELGPDEFAERIHAQHKLQEQQLE 126

Query: 541 MLKHMRKFHPDDQSAILE-------ELRRQMENANFDNSAAVLTTESIQDIVRRRIS 690
           MLKHMRKFH DDQS ILE       +LR+QME ANF++  ++L++E IQ+IVRRR+S
Sbjct: 127 MLKHMRKFHLDDQSVILEKLYLVFFQLRQQMEKANFESEPSILSSEQIQEIVRRRVS 183


>ref|XP_002298631.1| predicted protein [Populus trichocarpa] gi|222845889|gb|EEE83436.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  231 bits (588), Expect = 3e-58
 Identities = 116/172 (67%), Positives = 136/172 (79%)
 Frame = +1

Query: 175 VDNAGMLSREQLVHIFNRFSFLTSQPDVKKRISDAVKDKQEAVAITTAIQEEILLEMGID 354
           + ++GMLSREQL+++FN FS LTSQPDVKKRI+DAV DKQEAVA TT IQE I LEMG+D
Sbjct: 6   LQSSGMLSREQLLYLFNSFSQLTSQPDVKKRIADAVNDKQEAVAATTTIQESIFLEMGVD 65

Query: 355 PRFGIACLGKVNMVYENDSDLMIKFYGFVAKEEMACXXXXXXXXXXXXKVCIQHMLHEQQ 534
           P FGI+CLGKVN+VYEND DLMI+FY FVA EEMAC            K+  Q  L EQQ
Sbjct: 66  PSFGISCLGKVNVVYENDQDLMIRFYKFVANEEMACDEAELGPDEFAGKMHYQQKLQEQQ 125

Query: 535 LEMLKHMRKFHPDDQSAILEELRRQMENANFDNSAAVLTTESIQDIVRRRIS 690
           LEMLKHMRKFH DDQSAILE+L +QMENANF+  A+VL+ E +Q+ VRRR+S
Sbjct: 126 LEMLKHMRKFHLDDQSAILEKLHQQMENANFEGEASVLSPEQVQETVRRRVS 177


>ref|NP_001238689.1| uncharacterized protein LOC100527867 [Glycine max]
           gi|255633420|gb|ACU17068.1| unknown [Glycine max]
          Length = 182

 Score =  221 bits (564), Expect = 2e-55
 Identities = 108/173 (62%), Positives = 139/173 (80%)
 Frame = +1

Query: 172 GVDNAGMLSREQLVHIFNRFSFLTSQPDVKKRISDAVKDKQEAVAITTAIQEEILLEMGI 351
           G  ++GML+REQL ++F+RF FLTSQPDVKKRI++AV+DKQEAVA+TTAIQEEI LEMG+
Sbjct: 4   GTQSSGMLTREQLYYLFDRFIFLTSQPDVKKRIAEAVQDKQEAVAVTTAIQEEIFLEMGV 63

Query: 352 DPRFGIACLGKVNMVYENDSDLMIKFYGFVAKEEMACXXXXXXXXXXXXKVCIQHMLHEQ 531
           DPRFGI+CLGKV+ VYEND DL+I+FY F++KEE+AC            K+  Q  L EQ
Sbjct: 64  DPRFGISCLGKVSTVYENDLDLVIQFYKFLSKEEVACDEAELGEEEFTEKMLNQQKLQEQ 123

Query: 532 QLEMLKHMRKFHPDDQSAILEELRRQMENANFDNSAAVLTTESIQDIVRRRIS 690
           QLEMLK+MRKFH DDQSAILE+L +QMEN N+++  ++L+ E I +IV R++S
Sbjct: 124 QLEMLKYMRKFHLDDQSAILEKLHQQMENGNYESETSILSAEQIDEIVPRKVS 176


>ref|XP_002509509.1| conserved hypothetical protein [Ricinus communis]
           gi|223549408|gb|EEF50896.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  218 bits (554), Expect = 2e-54
 Identities = 110/172 (63%), Positives = 136/172 (79%)
 Frame = +1

Query: 175 VDNAGMLSREQLVHIFNRFSFLTSQPDVKKRISDAVKDKQEAVAITTAIQEEILLEMGID 354
           + ++GMLS EQL+++F+RF  LTSQPDVK++I DAV DKQEAVA+TTAIQE I LEMG+D
Sbjct: 7   LQSSGMLSIEQLLYLFDRFCQLTSQPDVKQKIVDAVNDKQEAVAVTTAIQEGIFLEMGVD 66

Query: 355 PRFGIACLGKVNMVYENDSDLMIKFYGFVAKEEMACXXXXXXXXXXXXKVCIQHMLHEQQ 534
           P FGI+CLGKVNMVYE + DLMI+FY FVA EE+AC            K+  Q  L +QQ
Sbjct: 67  PSFGISCLGKVNMVYETNRDLMIRFYKFVANEEIACDEAELGTDEFADKMQFQQKLQDQQ 126

Query: 535 LEMLKHMRKFHPDDQSAILEELRRQMENANFDNSAAVLTTESIQDIVRRRIS 690
           LEMLKHMRKFH DDQSAILE+L +Q++NA+F   A+VL++E IQDIVRRR+S
Sbjct: 127 LEMLKHMRKFHLDDQSAILEKLHQQLQNADFIGEASVLSSEQIQDIVRRRVS 178


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