BLASTX nr result

ID: Coptis24_contig00023278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023278
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22591.3| unnamed protein product [Vitis vinifera]              255   3e-66
emb|CAN70840.1| hypothetical protein VITISV_038886 [Vitis vinifera]   251   5e-65
ref|XP_002513617.1| conserved hypothetical protein [Ricinus comm...   247   9e-64
gb|AFK42630.1| unknown [Lotus japonicus]                              234   8e-60
ref|XP_002337176.1| predicted protein [Populus trichocarpa] gi|2...   224   8e-57

>emb|CBI22591.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  255 bits (651), Expect = 3e-66
 Identities = 120/158 (75%), Positives = 140/158 (88%)
 Frame = +3

Query: 54  MENMVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADR 233
           ME M YAEELVREFLVFRGFTNTLQA++ EL TDIGKGF VDKILDL+F VY+PKFQA++
Sbjct: 1   MEKMQYAEELVREFLVFRGFTNTLQAFEGELCTDIGKGFQVDKILDLIFSVYIPKFQAEK 60

Query: 234 LVALLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLL 413
           LV LLSFFKQ  S+S+E VL++++SKLE SILRYYIV AIQSGR ++V+EF G +GNDLL
Sbjct: 61  LVCLLSFFKQCFSSSSETVLIATLSKLEVSILRYYIVHAIQSGRTERVIEFFGMNGNDLL 120

Query: 414 QRGQDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRL 527
           QRGQDW PWFA+PYLKNPSLDPQFRI+FS+EW + LRL
Sbjct: 121 QRGQDWTPWFAVPYLKNPSLDPQFRIYFSREWLEALRL 158


>emb|CAN70840.1| hypothetical protein VITISV_038886 [Vitis vinifera]
          Length = 519

 Score =  251 bits (641), Expect = 5e-65
 Identities = 118/155 (76%), Positives = 138/155 (89%)
 Frame = +3

Query: 63  MVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADRLVA 242
           M YAEELVREFLVFRGFTNTLQA++ EL TDIGKGF VDKILDL+F VY+PKFQA++LV 
Sbjct: 1   MQYAEELVREFLVFRGFTNTLQAFEGELCTDIGKGFQVDKILDLIFSVYIPKFQAEKLVC 60

Query: 243 LLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLLQRG 422
           LLSFFKQ  S+S+E VL++++SKLE SILRYYIV AIQSGR ++V+EF G +GNDLLQRG
Sbjct: 61  LLSFFKQCFSSSSETVLIATLSKLEVSILRYYIVHAIQSGRTERVIEFFGMNGNDLLQRG 120

Query: 423 QDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRL 527
           QDW PWFA+PYLKNPSLDPQFRI+FS+EW + LRL
Sbjct: 121 QDWTPWFAVPYLKNPSLDPQFRIYFSREWLEALRL 155


>ref|XP_002513617.1| conserved hypothetical protein [Ricinus communis]
           gi|223547525|gb|EEF49020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 655

 Score =  247 bits (630), Expect = 9e-64
 Identities = 121/159 (76%), Positives = 137/159 (86%), Gaps = 1/159 (0%)
 Frame = +3

Query: 54  MENMVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADR 233
           MENM YAEELVREFLVFRGFTNTLQA+  ELSTDIGKGF VDK+LDL+F  Y+PK QAD+
Sbjct: 1   MENMQYAEELVREFLVFRGFTNTLQAFDIELSTDIGKGFQVDKLLDLIFSNYIPKLQADK 60

Query: 234 LVALLSFFKQYVSTS-TEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDL 410
           LV+LL FFKQ  S+S +E  LVS++SKLE S+LRYYIV AIQSGRKDKVVEF G +GNDL
Sbjct: 61  LVSLLYFFKQCFSSSLSETALVSTLSKLEVSLLRYYIVYAIQSGRKDKVVEFFGINGNDL 120

Query: 411 LQRGQDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRL 527
           LQ+  DW PWFAIPYLKNPSLDPQFR++FSKEW + LRL
Sbjct: 121 LQKNADWTPWFAIPYLKNPSLDPQFRVYFSKEWCEALRL 159


>gb|AFK42630.1| unknown [Lotus japonicus]
          Length = 199

 Score =  234 bits (596), Expect = 8e-60
 Identities = 111/155 (71%), Positives = 129/155 (83%)
 Frame = +3

Query: 63  MVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADRLVA 242
           M YAEELVREFLVFRGFTNTL+AY+TEL TDIGKGF VDKILDL+F VYVPKFQ ++LVA
Sbjct: 3   MEYAEELVREFLVFRGFTNTLEAYETELRTDIGKGFQVDKILDLIFSVYVPKFQGEKLVA 62

Query: 243 LLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLLQRG 422
           LL FFK YVS+S+E  LVS++SKLEASILR+Y+V A+QS R+DKVVEF   +G +L+Q  
Sbjct: 63  LLGFFKHYVSSSSETALVSTLSKLEASILRFYVVYALQSNRRDKVVEFFAANGAELVQSS 122

Query: 423 QDWVPWFAIPYLKNPSLDPQFRIFFSKEWFDGLRL 527
           QDW  WFAIPY KNP  DP+FR FFSKEW+  L L
Sbjct: 123 QDWTHWFAIPYTKNPQTDPEFRTFFSKEWYQALHL 157


>ref|XP_002337176.1| predicted protein [Populus trichocarpa] gi|222838411|gb|EEE76776.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  224 bits (570), Expect = 8e-57
 Identities = 107/147 (72%), Positives = 123/147 (83%)
 Frame = +3

Query: 54  MENMVYAEELVREFLVFRGFTNTLQAYQTELSTDIGKGFDVDKILDLVFLVYVPKFQADR 233
           MENM YAEELVREFLVFRGFTNTLQA   ELSTDIGKGF VDK+LDL+F +Y+P+FQ D+
Sbjct: 1   MENMQYAEELVREFLVFRGFTNTLQALDNELSTDIGKGFHVDKLLDLIFAIYIPRFQVDK 60

Query: 234 LVALLSFFKQYVSTSTEAVLVSSMSKLEASILRYYIVQAIQSGRKDKVVEFLGTSGNDLL 413
           LV LL+FFK   S  +E VLV ++ KLE  ILRYYIV AIQSGRKD V+EF G +GN+L+
Sbjct: 61  LVGLLNFFKHCFSNLSENVLVDTLLKLEGYILRYYIVYAIQSGRKDMVLEFFGINGNELV 120

Query: 414 QRGQDWVPWFAIPYLKNPSLDPQFRIF 494
           Q+G DW PWFAIPYLKNPSLDPQFRI+
Sbjct: 121 QKGHDWTPWFAIPYLKNPSLDPQFRIY 147


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