BLASTX nr result

ID: Coptis24_contig00023265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023265
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528769.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
ref|XP_004152420.1| PREDICTED: uncharacterized protein LOC101209...   112   3e-23
emb|CBI20386.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_003530743.1| PREDICTED: uncharacterized protein LOC100794...   108   3e-22
emb|CBI20388.3| unnamed protein product [Vitis vinifera]              106   2e-21

>ref|XP_002528769.1| conserved hypothetical protein [Ricinus communis]
           gi|223531772|gb|EEF33591.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 769

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/124 (47%), Positives = 76/124 (61%), Gaps = 9/124 (7%)
 Frame = +2

Query: 2   LLADWVAIFTLGLLSNNQNDDSSGLNGR---------DDXXXXXXXXXXXXXGGPDTITA 154
           LLAD  A F +GL+SN+Q++  S    +          D             GGPDTITA
Sbjct: 56  LLADATATFAVGLISNSQSNFGSDRKAQKTKNSDRENSDLLAFWAPFLLVHLGGPDTITA 115

Query: 155 FALEDNELWLRHLIGLIYQLIPAGYVFIRSFPTNTLLVPTIFIFPVGIVKYVERTLSLYG 334
           FALEDNELWLRHL+ L++Q +  GYVFI++ P N +++PT  +F  GI+KY ERT SLY 
Sbjct: 116 FALEDNELWLRHLLALVFQAVATGYVFIQTLPENKVMIPTFLLFLAGIIKYSERTRSLYL 175

Query: 335 ASFD 346
           AS D
Sbjct: 176 ASMD 179


>ref|XP_004152420.1| PREDICTED: uncharacterized protein LOC101209159 [Cucumis sativus]
           gi|449488744|ref|XP_004158159.1| PREDICTED:
           uncharacterized protein LOC101224461 [Cucumis sativus]
          Length = 757

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/122 (47%), Positives = 75/122 (61%)
 Frame = +2

Query: 2   LLADWVAIFTLGLLSNNQNDDSSGLNGRDDXXXXXXXXXXXXXGGPDTITAFALEDNELW 181
           LLADW A F +GL+S+NQ+   + +                  GGPDTITAFALEDN LW
Sbjct: 79  LLADWTASFIVGLISSNQSKSDANVY----LLAFWAPFLLIHLGGPDTITAFALEDNALW 134

Query: 182 LRHLIGLIYQLIPAGYVFIRSFPTNTLLVPTIFIFPVGIVKYVERTLSLYGASFDALNTE 361
           LRHLIGL++Q++   YVFI++ P N L VP I +F  GI+KY ERT +LY AS  +    
Sbjct: 135 LRHLIGLLFQVVATVYVFIQTIPQNKLRVPAILMFLAGIIKYAERTRALYLASLGSFRAS 194

Query: 362 CM 367
            +
Sbjct: 195 ML 196


>emb|CBI20386.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/110 (50%), Positives = 68/110 (61%)
 Frame = +2

Query: 2   LLADWVAIFTLGLLSNNQNDDSSGLNGRDDXXXXXXXXXXXXXGGPDTITAFALEDNELW 181
           LLADWVA F +GL++N   D    +   DD             GGPDTITAFALEDNELW
Sbjct: 55  LLADWVAAFAVGLIANGNKDGDKQVQN-DDLLAFWAPFLLLHLGGPDTITAFALEDNELW 113

Query: 182 LRHLIGLIYQLIPAGYVFIRSFPTNTLLVPTIFIFPVGIVKYVERTLSLY 331
           LRHL+GL+ Q I   YVF+ S  +N L +PTI +   G +KY ERT +LY
Sbjct: 114 LRHLLGLVIQFIAVAYVFLESI-SNDLWIPTILMLVAGTIKYAERTRALY 162


>ref|XP_003530743.1| PREDICTED: uncharacterized protein LOC100794157 [Glycine max]
          Length = 923

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   LLADWVAIFTLGLLSNNQNDDSSGLNGRDDXXXXXXXXXXXXX-GGPDTITAFALEDNEL 178
           LLAD+ A F +GL+SN   D+ + ++  +D              GGPDTITAFALEDNEL
Sbjct: 56  LLADYTANFCVGLISNKYGDEDTPISSVNDFLLAFWTPFLLLHLGGPDTITAFALEDNEL 115

Query: 179 WLRHLIGLIYQLIPAGYVFIRSFPTNTLLVPTIFIFPVGIVKYVERTLSLYGAS 340
           WLRH++GLI Q+    YVF+ + P NTL +PT  +F  GI+K+ ERT SL  AS
Sbjct: 116 WLRHMLGLIVQVCLTAYVFLLTLPENTLWIPTALVFTAGIIKFAERTRSLQLAS 169


>emb|CBI20388.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/116 (48%), Positives = 69/116 (59%)
 Frame = +2

Query: 2   LLADWVAIFTLGLLSNNQNDDSSGLNGRDDXXXXXXXXXXXXXGGPDTITAFALEDNELW 181
           LLADWVA F +GL++N   D    +   DD             GGPD ITAFALEDNELW
Sbjct: 55  LLADWVAAFAVGLIANGNKDGDKQVQS-DDLLAFWAPFLLLHLGGPDNITAFALEDNELW 113

Query: 182 LRHLIGLIYQLIPAGYVFIRSFPTNTLLVPTIFIFPVGIVKYVERTLSLYGASFDA 349
            RHL+GL+ Q I   YVF+ S  +N L +PTI +   G +KY ERT +LY A  +A
Sbjct: 114 PRHLLGLVIQFIAVAYVFLESI-SNDLWIPTILMLVAGTIKYAERTRALYLACLEA 168


Top