BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023260
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...   440   e-121
ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   422   e-116
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   417   e-114
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114
ref|XP_003559433.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   405   e-111

>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
            gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
            helicase, putative [Ricinus communis]
          Length = 547

 Score =  440 bits (1132), Expect = e-121
 Identities = 215/270 (79%), Positives = 244/270 (90%)
 Frame = +1

Query: 4    ASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCLD 183
            ASDAIGMGLNLNISRIIFST+KKF+G EMR LTVPEIKQIAGRAGRYGS +P GEVTCLD
Sbjct: 276  ASDAIGMGLNLNISRIIFSTMKKFDGVEMRYLTVPEIKQIAGRAGRYGSNYPAGEVTCLD 335

Query: 184  AEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLSPNYF 363
            A+D+  LHSSL+SPSP L+SAGLFPTFDL+ +YSRLHP+ GL+ IL  F+E AKLSPNYF
Sbjct: 336  ADDLSLLHSSLESPSPALESAGLFPTFDLMFMYSRLHPKKGLYQILEHFVENAKLSPNYF 395

Query: 364  IADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLVRLRE 543
            IADCEE+LKVAAVIDE+PL L+DKYLFCISPVDM+D+ISSQGLTQFAENYAKKG+VRL+E
Sbjct: 396  IADCEEVLKVAAVIDEMPLSLNDKYLFCISPVDMNDEISSQGLTQFAENYAKKGIVRLKE 455

Query: 544  IFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLLIEEF 723
            IFTPGTLQVPKTQ  L+ELES+HKVLDLYVWLSYRLEDSFPDRELAASQK++CSLLIEEF
Sbjct: 456  IFTPGTLQVPKTQTALKELESVHKVLDLYVWLSYRLEDSFPDRELAASQKAICSLLIEEF 515

Query: 724  LERLGWQRPNKRRLSPRSGRRSVLEQQARR 813
            LERLGWQ+P   +LS R+   S+L +  R+
Sbjct: 516  LERLGWQKPRTTKLSSRNKTSSLLSKDIRQ 545


>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 565

 Score =  422 bits (1086), Expect = e-116
 Identities = 206/270 (76%), Positives = 234/270 (86%)
 Frame = +1

Query: 4    ASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCLD 183
            ASDAIGMGLNLNISRIIFST+KKF+G E+RDLTVPEIKQIAGRAGRYGS FP+GEVTC+D
Sbjct: 294  ASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLTVPEIKQIAGRAGRYGSNFPVGEVTCMD 353

Query: 184  AEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLSPNYF 363
             ED+P LHSSL SPSP L+ AG+ PTFDL+ +YSRLHPR G + ILA FL+ AKLS NYF
Sbjct: 354  EEDLPLLHSSLNSPSPILERAGILPTFDLMYMYSRLHPRNGFYQILAHFLDNAKLSENYF 413

Query: 364  IADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLVRLRE 543
            I +CE++LKVAAVIDELPL LH+KYLFCISP DM D+ISSQGL QFAENYAKKGLVRLRE
Sbjct: 414  IVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLAQFAENYAKKGLVRLRE 473

Query: 544  IFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLLIEEF 723
            IFTPG+L+VPKT   L+ELESIHKVLDLYVWLS+RLE+SFPD ELAASQK++CS+LIEEF
Sbjct: 474  IFTPGSLKVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHELAASQKAICSMLIEEF 533

Query: 724  LERLGWQRPNKRRLSPRSGRRSVLEQQARR 813
            LERLGWQ+P  RRL       S+L Q  R+
Sbjct: 534  LERLGWQKPMARRLPSHKMSSSLLSQHMRK 563


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 600

 Score =  417 bits (1071), Expect = e-114
 Identities = 204/270 (75%), Positives = 233/270 (86%)
 Frame = +1

Query: 4    ASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCLD 183
            ASDAIGMGLNLNISRIIFST+KKF+G E+RDL+VPEIKQIAGRAGRYGS FP+GEVTC+D
Sbjct: 329  ASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLSVPEIKQIAGRAGRYGSNFPVGEVTCMD 388

Query: 184  AEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLSPNYF 363
             ED+  LHSSL SPSP L+ AGL PTFDL+ +YSRLHPR G + ILA FL+ AKLS NYF
Sbjct: 389  EEDLLLLHSSLNSPSPILERAGLLPTFDLMYMYSRLHPRNGFYQILAHFLDHAKLSENYF 448

Query: 364  IADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLVRLRE 543
            I +CE++LKVAAVIDELPL LH+KYLFCISP DM D+ISSQGLTQFAENYAKKGLVRLRE
Sbjct: 449  IVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLTQFAENYAKKGLVRLRE 508

Query: 544  IFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLLIEEF 723
            IFTPG+L+VPKT   L+ELESIHKVLDLYVWLS+RLE+SFPD ELA SQK++CS+LIEEF
Sbjct: 509  IFTPGSLKVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHELAVSQKAICSMLIEEF 568

Query: 724  LERLGWQRPNKRRLSPRSGRRSVLEQQARR 813
            LERLGWQ+P  RRL+       +L Q  R+
Sbjct: 569  LERLGWQKPMARRLASHKMSSPLLSQHMRK 598


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  417 bits (1071), Expect = e-114
 Identities = 204/271 (75%), Positives = 237/271 (87%), Gaps = 1/271 (0%)
 Frame = +1

Query: 4    ASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCLD 183
            ASDAIGMGLNLNISRIIFST+KKF+G EMRDLT+ E+KQIAGRAGRYGS FP+GEVTCL 
Sbjct: 299  ASDAIGMGLNLNISRIIFSTMKKFDGVEMRDLTISEVKQIAGRAGRYGSDFPVGEVTCLH 358

Query: 184  AEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLSPNYF 363
            A+D+P LHSSLKSPSP L+ AGLFPTFDL+ +YSRLHP+ GL+ I+  FLE AKLS NYF
Sbjct: 359  ADDLPLLHSSLKSPSPILECAGLFPTFDLIFMYSRLHPKKGLYRIMEHFLENAKLSENYF 418

Query: 364  IADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLVRLRE 543
            IA+CEEMLKVAAV+D LP+ LHDKYLF ISPVDM ++ISSQGLTQFA+NYA+KG+VRL+E
Sbjct: 419  IANCEEMLKVAAVVDVLPISLHDKYLFVISPVDMRNEISSQGLTQFAQNYAQKGIVRLKE 478

Query: 544  IFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLLIEEF 723
            IFTPGTLQVPKT+  L+ELESIHKVLDLYVWLS+RLEDSFPDRELAASQK++C LLIEEF
Sbjct: 479  IFTPGTLQVPKTESALKELESIHKVLDLYVWLSFRLEDSFPDRELAASQKAICGLLIEEF 538

Query: 724  LERLGWQR-PNKRRLSPRSGRRSVLEQQARR 813
            LER GWQ+ P  R+L  R     +L ++ R+
Sbjct: 539  LERFGWQKQPKTRKLPSRVNSGFLLSKETRQ 569


>ref|XP_003559433.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Brachypodium distachyon]
          Length = 572

 Score =  405 bits (1042), Expect = e-111
 Identities = 202/271 (74%), Positives = 231/271 (85%), Gaps = 2/271 (0%)
 Frame = +1

Query: 4    ASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCLD 183
            ASDAIGMGLNLNISRIIFSTL+KF+G  MR+LTVPEIKQIAGRAGRYGSKFP+GEVTCL 
Sbjct: 291  ASDAIGMGLNLNISRIIFSTLEKFDGVRMRELTVPEIKQIAGRAGRYGSKFPVGEVTCLH 350

Query: 184  AEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLSPNYF 363
            AED+P LHSSLK PSP ++ AGLFPTFDLL +YSRLH     HPIL RFLEKAKLSP+YF
Sbjct: 351  AEDLPLLHSSLKLPSPIIERAGLFPTFDLLSVYSRLHGTDFFHPILERFLEKAKLSPDYF 410

Query: 364  IADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLVRLRE 543
            IADCE+MLKVAA++DELPL L+DKY+FC+SPVD+ DDIS+QGL QFA NYAKKG VRL+E
Sbjct: 411  IADCEDMLKVAAIVDELPLGLYDKYIFCLSPVDVRDDISTQGLIQFAGNYAKKGTVRLKE 470

Query: 544  IFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLLIEEF 723
             FT GTL+VPKT   L+ELES+HKVL+LYVWL YR EDSFPDRELAASQKS+CS+LIEE+
Sbjct: 471  RFTSGTLRVPKTHNQLKELESVHKVLELYVWLGYRFEDSFPDRELAASQKSICSMLIEEY 530

Query: 724  LERLGWQRPNKRRL--SPRSGRRSVLEQQAR 810
            LER GWQ+  ++R   SPR  R+     Q R
Sbjct: 531  LERSGWQQQGQKRFLHSPRKLRQEYDASQLR 561