BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023259
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like ...   448   e-124
ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinu...   444   e-122
ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isofo...   441   e-121
ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like ...   434   e-119

>ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like [Vitis vinifera]
          Length = 371

 Score =  448 bits (1153), Expect = e-124
 Identities = 225/284 (79%), Positives = 241/284 (84%), Gaps = 2/284 (0%)
 Frame = -3

Query: 998 RTGGSNSTPKLWGKVIESRLKGLSSSEGTPTSMSGRVDSVVVLMEEEEPKEWIAQVEPGV 819
           RTG S+ST   WGK +E+RLKGLSS EGTP S SGR    VV +EE EPKEW+AQVEPGV
Sbjct: 88  RTGSSSSTTPRWGKEMEARLKGLSSGEGTPASASGRRVESVVFVEENEPKEWVAQVEPGV 147

Query: 818 LITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNHQVVPLPTPP 639
           LITFVSLP+GGNDLKRIRFSREMFNKWQAQRWWAENYD+VMELYNVQRFN Q  PLPTPP
Sbjct: 148 LITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPP 207

Query: 638 RSEDESSKIESAGESPMTPPLIKEPLPRNCQRP--MGMGYSSSDSLEHPSAPYRHYYDSV 465
           RSEDESSK+ESA +SP+TPPL KE LPRN  RP  +GMGYSSSDSL+H     RH+YDS 
Sbjct: 208 RSEDESSKMESAEDSPVTPPLTKERLPRNLYRPSGLGMGYSSSDSLDHHPMQPRHFYDSG 267

Query: 464 GLTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELSISNASDVETEWVEQDEPGVY 285
           GLTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELS+SNASD+ETEWVE+DEPGVY
Sbjct: 268 GLTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELSVSNASDLETEWVEEDEPGVY 327

Query: 284 ITIRALPGGIXXXXXXXXXXXXFGEMHARLWWEENRARIHEQYL 153
           ITIRALPGG             FGEMHARLWWEENRARIHEQYL
Sbjct: 328 ITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIHEQYL 371


>ref|XP_002521348.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223539426|gb|EEF41016.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 372

 Score =  444 bits (1143), Expect = e-122
 Identities = 227/283 (80%), Positives = 240/283 (84%), Gaps = 1/283 (0%)
 Frame = -3

Query: 998 RTGGSNSTPKLWGKVIESRLKGLSSS-EGTPTSMSGRVDSVVVLMEEEEPKEWIAQVEPG 822
           RTG SNSTP+LWGK +E+RLKGLSSS EGTP S+SGR +SVV  MEEEEPKEW+AQVEPG
Sbjct: 92  RTGSSNSTPRLWGKEMEARLKGLSSSGEGTPASVSGRAESVV-FMEEEEPKEWVAQVEPG 150

Query: 821 VLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNHQVVPLPTP 642
           VLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNHQ VPLPTP
Sbjct: 151 VLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNHQAVPLPTP 210

Query: 641 PRSEDESSKIESAGESPMTPPLIKEPLPRNCQRPMGMGYSSSDSLEHPSAPYRHYYDSVG 462
           PRSEDESSK ESA +SP TPPL KE  PRN  RP GMGYSSSDSL+H     R YYDSVG
Sbjct: 211 PRSEDESSKPESAKDSPATPPLGKER-PRNLYRPTGMGYSSSDSLDHHPMQSRQYYDSVG 269

Query: 461 LTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELSISNASDVETEWVEQDEPGVYI 282
           L STPKLSSISGAKTE SS+  S RTSSSR+AD SGELS+SNASD+ETEWVEQDEPGVYI
Sbjct: 270 LASTPKLSSISGAKTEASSVGGSARTSSSRDADHSGELSVSNASDMETEWVEQDEPGVYI 329

Query: 281 TIRALPGGIXXXXXXXXXXXXFGEMHARLWWEENRARIHEQYL 153
           TIRALPGG             FGEMHARLWW+ENRARI EQYL
Sbjct: 330 TIRALPGGTRELRRVRFSRERFGEMHARLWWDENRARIQEQYL 372


>ref|XP_002276168.1| PREDICTED: protein Brevis radix-like 2 isoform 2 [Vitis vinifera]
           gi|297743026|emb|CBI35893.3| unnamed protein product
           [Vitis vinifera]
          Length = 371

 Score =  441 bits (1134), Expect = e-121
 Identities = 224/283 (79%), Positives = 240/283 (84%), Gaps = 1/283 (0%)
 Frame = -3

Query: 998 RTGGSNSTPKLWGKVIESRLKGLSSSEGTPTSMSGRVDSVVVLMEEEEPKEWIAQVEPGV 819
           RTG S+STP+L GK +E+R K LSS EGTP S+SGR +SVV  MEE+EPKEWIAQVEPGV
Sbjct: 90  RTGSSSSTPRLLGKEMEARSKRLSSGEGTPASVSGRAESVV-FMEEDEPKEWIAQVEPGV 148

Query: 818 LITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNHQVVPLPTPP 639
           LITFVS+PQGGNDLKRIRFSRE+FNKWQAQRWWAENYDKVMELYNVQRFN Q VPLPTPP
Sbjct: 149 LITFVSMPQGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRFNRQAVPLPTPP 208

Query: 638 RSEDESSKIESAGESPMTPPLIKEPLPRNCQ-RPMGMGYSSSDSLEHPSAPYRHYYDSVG 462
           RSEDESS++ES   SP+TPPL KE LPRN   RP GMGYSSSDSL+H     RHYYDS G
Sbjct: 209 RSEDESSRMESIQNSPVTPPLSKERLPRNFHHRPTGMGYSSSDSLDHHPLQSRHYYDSAG 268

Query: 461 LTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELSISNASDVETEWVEQDEPGVYI 282
           L STPKLSSISGAKTETSS+DAS+RTSSSREADRSGELSISNASD+ETEWVEQDEPGVYI
Sbjct: 269 LASTPKLSSISGAKTETSSIDASVRTSSSREADRSGELSISNASDMETEWVEQDEPGVYI 328

Query: 281 TIRALPGGIXXXXXXXXXXXXFGEMHARLWWEENRARIHEQYL 153
           TIRALP G             FGEMHARLWWEENRARI EQYL
Sbjct: 329 TIRALPDGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL 371


>ref|XP_002309199.1| predicted protein [Populus trichocarpa] gi|222855175|gb|EEE92722.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  439 bits (1129), Expect = e-121
 Identities = 223/290 (76%), Positives = 247/290 (85%), Gaps = 8/290 (2%)
 Frame = -3

Query: 998 RTGGSNST-PKLWGKVIESRLKGLSSS--EGTPTSMSG---RVDSVVVLMEEEEPKEWIA 837
           RTG S+ST P+ WGK +E+RLKG+SSS  EGTP S++G   RVD  +V +EE+EPKEW+A
Sbjct: 88  RTGSSSSTTPRTWGKEMEARLKGISSSSGEGTPNSVNGSGRRVDPPIVFVEEKEPKEWVA 147

Query: 836 QVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNHQVV 657
           QVEPGVLITFVSLP+GGNDLKRIRFSR+MFNKWQAQRWWAENYD++MELYNVQRFN Q  
Sbjct: 148 QVEPGVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRIMELYNVQRFNRQAF 207

Query: 656 PLPTPPRSEDESSKIESAGESPMTPPLIKEPLPRNCQRP--MGMGYSSSDSLEHPSAPYR 483
           PLPTPPRSEDESSK+ESA +SP+TPPL +E LPRN  RP  MGMGYSSSDSL+H     R
Sbjct: 208 PLPTPPRSEDESSKMESAEDSPVTPPLNRERLPRNLYRPTGMGMGYSSSDSLDHHPLQAR 267

Query: 482 HYYDSVGLTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELSISNASDVETEWVEQ 303
           HY DS+G TSTPKLSSISGAKTETSSMDASIR+SSSREADRSGELSISNASD+ETEWVEQ
Sbjct: 268 HYCDSIGFTSTPKLSSISGAKTETSSMDASIRSSSSREADRSGELSISNASDMETEWVEQ 327

Query: 302 DEPGVYITIRALPGGIXXXXXXXXXXXXFGEMHARLWWEENRARIHEQYL 153
           DEPGVYITIRALPGG             FGEMHAR+WWEENRARIHEQYL
Sbjct: 328 DEPGVYITIRALPGGKRELRRVRFSRERFGEMHARVWWEENRARIHEQYL 377


>ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score =  434 bits (1117), Expect = e-119
 Identities = 219/286 (76%), Positives = 240/286 (83%), Gaps = 4/286 (1%)
 Frame = -3

Query: 998 RTGGSNSTP-KLWGKVIESRLKGLSSSEGTPTSMSGR-VDSVVVLMEEEEPKEWIAQVEP 825
           RTG S+ST  + WGK +E+RLKG+SS EGTP S SGR  + VV+ +EE EPKEW+AQVEP
Sbjct: 81  RTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPVVLFVEENEPKEWVAQVEP 140

Query: 824 GVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNHQVVPLPT 645
           GVLITFVSLP+GGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFN Q  PLPT
Sbjct: 141 GVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNRQAFPLPT 200

Query: 644 PPRSEDESSKIESAGESPMTPPLIKEPLPRNCQRP--MGMGYSSSDSLEHPSAPYRHYYD 471
           PPRSEDESSK+ESA ESP+TPPL +E LPRN  RP  MGMGYSSSDS +H S   RH+YD
Sbjct: 201 PPRSEDESSKLESAEESPVTPPLNRERLPRNMYRPTGMGMGYSSSDSFDHQSMQSRHFYD 260

Query: 470 SVGLTSTPKLSSISGAKTETSSMDASIRTSSSREADRSGELSISNASDVETEWVEQDEPG 291
           S G+ STPK+S+IS AKTE SSMDASIR+SSSREADRSG+ SISNASD+ETEWVEQDEPG
Sbjct: 261 SNGMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDFSISNASDLETEWVEQDEPG 320

Query: 290 VYITIRALPGGIXXXXXXXXXXXXFGEMHARLWWEENRARIHEQYL 153
           VYITIRALPGG             FGEMHARLWWEENRARIHEQYL
Sbjct: 321 VYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL 366