BLASTX nr result

ID: Coptis24_contig00023240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023240
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275108.1| PREDICTED: patatin group A-3-like [Vitis vin...   368   e-100
ref|XP_004142417.1| PREDICTED: patatin group A-3-like isoform 2 ...   352   6e-95
ref|XP_004142416.1| PREDICTED: patatin group A-3-like isoform 1 ...   352   6e-95
ref|XP_002316362.1| predicted protein [Populus trichocarpa] gi|2...   352   6e-95
ref|XP_002311098.1| predicted protein [Populus trichocarpa] gi|2...   352   7e-95

>ref|XP_002275108.1| PREDICTED: patatin group A-3-like [Vitis vinifera]
          Length = 458

 Score =  368 bits (945), Expect = e-100
 Identities = 189/275 (68%), Positives = 219/275 (79%), Gaps = 5/275 (1%)
 Frame = -2

Query: 815 DGGGMRGILSGKALAYLEQALKKKSGNPEARIADYFDVAAGTGVGGIFTAMLFGTKGDNR 636
           DGGGMRGILSG+ALAYLEQALK KSGNP+ARIADYFDVAAG GVGGIFTAMLFGTK ++R
Sbjct: 78  DGGGMRGILSGRALAYLEQALKTKSGNPQARIADYFDVAAGAGVGGIFTAMLFGTKDNSR 137

Query: 635 PIFKAEETWKFLVNQGKRFFKPASSSSNG--SLLHRLFR---TVSVTNKLEKIMKEAFSD 471
           PIF+AE+TWKFL  QGKR ++ +S S +G  S L R+ R   + S  + LEK MKEAF++
Sbjct: 138 PIFQAEDTWKFLAEQGKRCYRSSSGSGSGGGSFLRRILRGGSSGSAASGLEKAMKEAFAE 197

Query: 470 KSRSLTLKDTLKPXXXXXXXXXXXXXXXXXXXXXXXXXXVLIPCYDLSSSAPFVFSRADA 291
             RSLTLKDTLKP                          VLIPCYDLSSSAPF+FSRADA
Sbjct: 198 NGRSLTLKDTLKP--------------------------VLIPCYDLSSSAPFLFSRADA 231

Query: 290 FESESFDFRLWEVCRATTAEPAVFEPVLMKSVDGQKQCLAVEGGLTMSNPVAAAITHVLH 111
            E++SFDFRLWEVCRAT+AEPA+FEPV M+SVDGQ +C+A++GGL MSNP AAAITHVLH
Sbjct: 232 LETDSFDFRLWEVCRATSAEPAIFEPVSMRSVDGQTRCVAIDGGLAMSNPTAAAITHVLH 291

Query: 110 NKQEFPFVRGVEDLMVLSLGSGQFLEGNYNYEQVK 6
           NKQEFPFVRGVEDL+VLSLG+GQ LEG+Y+Y+QVK
Sbjct: 292 NKQEFPFVRGVEDLLVLSLGTGQLLEGSYDYDQVK 326


>ref|XP_004142417.1| PREDICTED: patatin group A-3-like isoform 2 [Cucumis sativus]
           gi|449531073|ref|XP_004172512.1| PREDICTED: patatin
           group A-3-like [Cucumis sativus]
          Length = 417

 Score =  352 bits (903), Expect = 6e-95
 Identities = 183/278 (65%), Positives = 209/278 (75%), Gaps = 7/278 (2%)
 Frame = -2

Query: 815 DGGGMRGILSGKALAYLEQALKKKSGNPEARIADYFDVAAGTGVGGIFTAMLFGTKGDNR 636
           D GGMRGILSGKAL+YLEQALK KSGNP+ARIADYFDVAAG G+GGIFTAMLF TK   R
Sbjct: 85  DSGGMRGILSGKALSYLEQALKTKSGNPDARIADYFDVAAGAGIGGIFTAMLFATKDQTR 144

Query: 635 PIFKAEETWKFLVNQGKRFFKPASSSSNGSLLHRLFR-------TVSVTNKLEKIMKEAF 477
           PIF A++TW+FL  QGKRF++  SSSS+G+   R  R         + T  LEK MKEAF
Sbjct: 145 PIFNADDTWRFLAEQGKRFYR--SSSSSGNAFFRRLRKPRGSSSAANSTAGLEKAMKEAF 202

Query: 476 SDKSRSLTLKDTLKPXXXXXXXXXXXXXXXXXXXXXXXXXXVLIPCYDLSSSAPFVFSRA 297
            +  R+LTLKDTLKP                          VLIPCYDLSS+APF+FSRA
Sbjct: 203 VENGRTLTLKDTLKP--------------------------VLIPCYDLSSTAPFLFSRA 236

Query: 296 DAFESESFDFRLWEVCRATTAEPAVFEPVLMKSVDGQKQCLAVEGGLTMSNPVAAAITHV 117
           DA E+ESF+FRLWEVCRAT+AEP VF+PV M+S+D Q QCLAV+GGL MSNP AAAITHV
Sbjct: 237 DALETESFNFRLWEVCRATSAEPGVFDPVPMQSIDRQTQCLAVDGGLAMSNPTAAAITHV 296

Query: 116 LHNKQEFPFVRGVEDLMVLSLGSGQFLEGNYNYEQVKG 3
           LHNKQEFPFVRGVEDL+VLSLG+GQ  EGNY+Y +VKG
Sbjct: 297 LHNKQEFPFVRGVEDLLVLSLGTGQLFEGNYDYNEVKG 334


>ref|XP_004142416.1| PREDICTED: patatin group A-3-like isoform 1 [Cucumis sativus]
          Length = 465

 Score =  352 bits (903), Expect = 6e-95
 Identities = 183/278 (65%), Positives = 209/278 (75%), Gaps = 7/278 (2%)
 Frame = -2

Query: 815 DGGGMRGILSGKALAYLEQALKKKSGNPEARIADYFDVAAGTGVGGIFTAMLFGTKGDNR 636
           D GGMRGILSGKAL+YLEQALK KSGNP+ARIADYFDVAAG G+GGIFTAMLF TK   R
Sbjct: 85  DSGGMRGILSGKALSYLEQALKTKSGNPDARIADYFDVAAGAGIGGIFTAMLFATKDQTR 144

Query: 635 PIFKAEETWKFLVNQGKRFFKPASSSSNGSLLHRLFR-------TVSVTNKLEKIMKEAF 477
           PIF A++TW+FL  QGKRF++  SSSS+G+   R  R         + T  LEK MKEAF
Sbjct: 145 PIFNADDTWRFLAEQGKRFYR--SSSSSGNAFFRRLRKPRGSSSAANSTAGLEKAMKEAF 202

Query: 476 SDKSRSLTLKDTLKPXXXXXXXXXXXXXXXXXXXXXXXXXXVLIPCYDLSSSAPFVFSRA 297
            +  R+LTLKDTLKP                          VLIPCYDLSS+APF+FSRA
Sbjct: 203 VENGRTLTLKDTLKP--------------------------VLIPCYDLSSTAPFLFSRA 236

Query: 296 DAFESESFDFRLWEVCRATTAEPAVFEPVLMKSVDGQKQCLAVEGGLTMSNPVAAAITHV 117
           DA E+ESF+FRLWEVCRAT+AEP VF+PV M+S+D Q QCLAV+GGL MSNP AAAITHV
Sbjct: 237 DALETESFNFRLWEVCRATSAEPGVFDPVPMQSIDRQTQCLAVDGGLAMSNPTAAAITHV 296

Query: 116 LHNKQEFPFVRGVEDLMVLSLGSGQFLEGNYNYEQVKG 3
           LHNKQEFPFVRGVEDL+VLSLG+GQ  EGNY+Y +VKG
Sbjct: 297 LHNKQEFPFVRGVEDLLVLSLGTGQLFEGNYDYNEVKG 334


>ref|XP_002316362.1| predicted protein [Populus trichocarpa] gi|222865402|gb|EEF02533.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  352 bits (903), Expect = 6e-95
 Identities = 182/274 (66%), Positives = 208/274 (75%), Gaps = 5/274 (1%)
 Frame = -2

Query: 812 GGGMRGILSGKALAYLEQALKKKSGNPEARIADYFDVAAGTGVGGIFTAMLFGTKGDNRP 633
           G  ++GI+SGKALAYLE ALK KSGNP+ARIADYFDVAAGTG+GGIFTAMLFGTK  +RP
Sbjct: 89  GSSLKGIISGKALAYLENALKVKSGNPDARIADYFDVAAGTGIGGIFTAMLFGTKDHSRP 148

Query: 632 IFKAEETWKFLVNQGKRFFKPASSSSNGSLLHRLFR-----TVSVTNKLEKIMKEAFSDK 468
           I KAEETWKFL +QGK+F+    +  NG    R FR     + + T  LEK MKE FSDK
Sbjct: 149 ILKAEETWKFLADQGKKFY----TYGNGGFFKRFFRGGATGSTAATAGLEKAMKETFSDK 204

Query: 467 SRSLTLKDTLKPXXXXXXXXXXXXXXXXXXXXXXXXXXVLIPCYDLSSSAPFVFSRADAF 288
            R+LTLKDTLKP                          VLIPCYDLSS+APF+FSRADA 
Sbjct: 205 GRNLTLKDTLKP--------------------------VLIPCYDLSSTAPFLFSRADAL 238

Query: 287 ESESFDFRLWEVCRATTAEPAVFEPVLMKSVDGQKQCLAVEGGLTMSNPVAAAITHVLHN 108
           E++SFDFRLWEVCRAT+AEP +F+PVLM S+DGQ +CLAV+GGL MSNP AAAITHVLHN
Sbjct: 239 ETDSFDFRLWEVCRATSAEPGLFDPVLMGSIDGQTRCLAVDGGLAMSNPAAAAITHVLHN 298

Query: 107 KQEFPFVRGVEDLMVLSLGSGQFLEGNYNYEQVK 6
           KQEFPFVRGVEDL+VLSLG+GQ LE +Y YEQVK
Sbjct: 299 KQEFPFVRGVEDLLVLSLGTGQILEVSYEYEQVK 332


>ref|XP_002311098.1| predicted protein [Populus trichocarpa] gi|222850918|gb|EEE88465.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  352 bits (902), Expect = 7e-95
 Identities = 181/274 (66%), Positives = 210/274 (76%), Gaps = 5/274 (1%)
 Frame = -2

Query: 812 GGGMRGILSGKALAYLEQALKKKSGNPEARIADYFDVAAGTGVGGIFTAMLFGTKGDNRP 633
           G  ++GI+SGKALAYLE ALK KSGNP+ARIADYFDVAAGTG+GGIFTAMLFGTK  NRP
Sbjct: 81  GSSLKGIISGKALAYLENALKLKSGNPDARIADYFDVAAGTGIGGIFTAMLFGTKDHNRP 140

Query: 632 IFKAEETWKFLVNQGKRFFKPASSSSNGSLLHRLFR-----TVSVTNKLEKIMKEAFSDK 468
           I KAEETW+FL +QGK+ F   S + N   L R F+     T + T  LEK MKE F++K
Sbjct: 141 IMKAEETWRFLADQGKKLF--TSGNRNVGFLKRFFKGSSTGTTAATAGLEKAMKETFTEK 198

Query: 467 SRSLTLKDTLKPXXXXXXXXXXXXXXXXXXXXXXXXXXVLIPCYDLSSSAPFVFSRADAF 288
            R+LTLKDTLKP                          VLIPCYDLSS+APF+FSRADA 
Sbjct: 199 GRNLTLKDTLKP--------------------------VLIPCYDLSSTAPFLFSRADAL 232

Query: 287 ESESFDFRLWEVCRATTAEPAVFEPVLMKSVDGQKQCLAVEGGLTMSNPVAAAITHVLHN 108
           E++SFDFR+WEVCRAT+AEP +F+PVLM+SVDGQ +CLAV+GGL MSNP AAAITHVLHN
Sbjct: 233 ETDSFDFRIWEVCRATSAEPGLFDPVLMRSVDGQTRCLAVDGGLAMSNPTAAAITHVLHN 292

Query: 107 KQEFPFVRGVEDLMVLSLGSGQFLEGNYNYEQVK 6
           KQEFPFVRGVEDL+VLSLG+GQ LE +Y+YEQVK
Sbjct: 293 KQEFPFVRGVEDLLVLSLGTGQILEVSYDYEQVK 326


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