BLASTX nr result

ID: Coptis24_contig00023235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023235
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277660.1| PREDICTED: uncharacterized protein LOC100244...   308   1e-81
ref|XP_003604582.1| OTU-like cysteine protease family protein ex...   275   1e-71
ref|XP_002277681.1| PREDICTED: uncharacterized protein LOC100244...   274   2e-71
ref|XP_003520932.1| PREDICTED: OTU domain-containing protein At3...   270   3e-70
gb|AFK49612.1| unknown [Lotus japonicus]                              257   2e-66

>ref|XP_002277660.1| PREDICTED: uncharacterized protein LOC100244154 isoform 1 [Vitis
           vinifera] gi|297740254|emb|CBI30436.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  308 bits (788), Expect = 1e-81
 Identities = 159/220 (72%), Positives = 175/220 (79%), Gaps = 6/220 (2%)
 Frame = -1

Query: 863 FMAENILQQLKQGTAKFELVXXXXXXXXXXXXFHVNT---PHFFARIGPSLGGA---MKK 702
           F  E +LQQLK G A+FELV              ++T   P FFARIG SLGGA   MKK
Sbjct: 7   FSNEAVLQQLKHGRARFELVSSPVPSISSPKLPTLSTENGPQFFARIGSSLGGASPAMKK 66

Query: 701 LEKYSVQKVTGDGRCMFRALVKGMAMNKGLSLSSCQERDDADELRMAVKEIICESDKERR 522
           +++YSVQKVTGDGRCMFRALVKGMA NKG+++SS +ERDDADELRMAVKEIIC + KERR
Sbjct: 67  VQRYSVQKVTGDGRCMFRALVKGMAFNKGIAISSREERDDADELRMAVKEIICGNGKERR 126

Query: 521 QYEEALVAITVDESLKRYCQRIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGWG 342
           QYEEALVAITV+ESLKRYCQRIER DFWGGESELLVLSKLCHQP+IVYIPE+EHT  GW 
Sbjct: 127 QYEEALVAITVEESLKRYCQRIERPDFWGGESELLVLSKLCHQPIIVYIPEHEHTRGGWS 186

Query: 341 TGFIPIAEYGSEFXXXXXXXKPRKAVRLLYSGKNHYDLLV 222
            GFIPIAEYGSEF       KPR  VRLLYSGKNHYDLL+
Sbjct: 187 PGFIPIAEYGSEFGKSSRNGKPRGVVRLLYSGKNHYDLLI 226


>ref|XP_003604582.1| OTU-like cysteine protease family protein expressed [Medicago
           truncatula] gi|355505637|gb|AES86779.1| OTU-like
           cysteine protease family protein expressed [Medicago
           truncatula] gi|388501534|gb|AFK38833.1| unknown
           [Medicago truncatula]
          Length = 229

 Score =  275 bits (702), Expect = 1e-71
 Identities = 141/221 (63%), Positives = 171/221 (77%), Gaps = 10/221 (4%)
 Frame = -1

Query: 854 ENILQQLKQGTAKFELVXXXXXXXXXXXXFHVN-------TPHFFARIGPSLGG---AMK 705
           +NIL+QLK GTAKFE+V             + +       + HFFARIG S+GG   AMK
Sbjct: 13  DNILKQLKDGTAKFEIVSSPVASVVSRFNRNSSLFGVGNCSTHFFARIGSSIGGQSTAMK 72

Query: 704 KLEKYSVQKVTGDGRCMFRALVKGMAMNKGLSLSSCQERDDADELRMAVKEIICESDKER 525
           KLE++SVQKVTGDGRC+FRALVKGMA NKG++L+  +ER++ADELRMAVKE ICE+  +R
Sbjct: 73  KLERFSVQKVTGDGRCLFRALVKGMAHNKGMALNQREERENADELRMAVKEAICENVGDR 132

Query: 524 RQYEEALVAITVDESLKRYCQRIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGW 345
           + YEEA++A+TVDE L+RYC+RI + DFWGGESELLVLSKLC QP+IVYIPE+EH   GW
Sbjct: 133 KLYEEAIIAVTVDEPLQRYCRRIGQPDFWGGESELLVLSKLCKQPIIVYIPEHEHRGGGW 192

Query: 344 GTGFIPIAEYGSEFXXXXXXXKPRKAVRLLYSGKNHYDLLV 222
           G+GFIPIAEYGSEF         RKAVRLL+SGKNHYDLL+
Sbjct: 193 GSGFIPIAEYGSEF----KKGSSRKAVRLLFSGKNHYDLLL 229


>ref|XP_002277681.1| PREDICTED: uncharacterized protein LOC100244154 isoform 2 [Vitis
           vinifera]
          Length = 163

 Score =  274 bits (701), Expect = 2e-71
 Identities = 133/163 (81%), Positives = 145/163 (88%)
 Frame = -1

Query: 710 MKKLEKYSVQKVTGDGRCMFRALVKGMAMNKGLSLSSCQERDDADELRMAVKEIICESDK 531
           MKK+++YSVQKVTGDGRCMFRALVKGMA NKG+++SS +ERDDADELRMAVKEIIC + K
Sbjct: 1   MKKVQRYSVQKVTGDGRCMFRALVKGMAFNKGIAISSREERDDADELRMAVKEIICGNGK 60

Query: 530 ERRQYEEALVAITVDESLKRYCQRIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNA 351
           ERRQYEEALVAITV+ESLKRYCQRIER DFWGGESELLVLSKLCHQP+IVYIPE+EHT  
Sbjct: 61  ERRQYEEALVAITVEESLKRYCQRIERPDFWGGESELLVLSKLCHQPIIVYIPEHEHTRG 120

Query: 350 GWGTGFIPIAEYGSEFXXXXXXXKPRKAVRLLYSGKNHYDLLV 222
           GW  GFIPIAEYGSEF       KPR  VRLLYSGKNHYDLL+
Sbjct: 121 GWSPGFIPIAEYGSEFGKSSRNGKPRGVVRLLYSGKNHYDLLI 163


>ref|XP_003520932.1| PREDICTED: OTU domain-containing protein At3g57810-like [Glycine
           max]
          Length = 226

 Score =  270 bits (690), Expect = 3e-70
 Identities = 142/221 (64%), Positives = 168/221 (76%), Gaps = 10/221 (4%)
 Frame = -1

Query: 854 ENILQQLKQGTAKFELVXXXXXXXXXXXXFHVN-------TPHFFARIGPSLGG---AMK 705
           E++L+QL+ GTAKFE+V             + +       +   FARIG S GG   AMK
Sbjct: 10  EDVLEQLRNGTAKFEVVSSPVPSVAAPPNRNTSLFGIGNSSTVLFARIGSSFGGHSPAMK 69

Query: 704 KLEKYSVQKVTGDGRCMFRALVKGMAMNKGLSLSSCQERDDADELRMAVKEIICESDKER 525
           KLE +SVQKVTGDGRC+FRALVKGMA NKG +L+  +ER++ADELRMAVKE ICE++ ER
Sbjct: 70  KLEHFSVQKVTGDGRCLFRALVKGMAYNKGTTLNQREERENADELRMAVKEAICENEGER 129

Query: 524 RQYEEALVAITVDESLKRYCQRIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAGW 345
           + YEEAL+AITVDE +KRYCQRI R DFWGGESELLVLSKLC QP+IVYIPE+EH + G+
Sbjct: 130 KLYEEALIAITVDEPIKRYCQRIVRPDFWGGESELLVLSKLCKQPIIVYIPEHEHRSGGF 189

Query: 344 GTGFIPIAEYGSEFXXXXXXXKPRKAVRLLYSGKNHYDLLV 222
           G+GFIPIAEYGS+F         RKAVRLLYSGKNHYDLLV
Sbjct: 190 GSGFIPIAEYGSDF----RKGSSRKAVRLLYSGKNHYDLLV 226


>gb|AFK49612.1| unknown [Lotus japonicus]
          Length = 225

 Score =  257 bits (657), Expect = 2e-66
 Identities = 137/222 (61%), Positives = 164/222 (73%), Gaps = 11/222 (4%)
 Frame = -1

Query: 854 ENILQQLKQGTAKFELVXXXXXXXXXXXXFHV--------NTPHFFARIGPSLGG---AM 708
           E+IL+Q++ G+AKFELV                       ++  FFAR+G    G   AM
Sbjct: 8   EDILEQMRNGSAKFELVSDSPVPSIAALPNRNASFFGVGNSSSLFFARVGSLFSGQSPAM 67

Query: 707 KKLEKYSVQKVTGDGRCMFRALVKGMAMNKGLSLSSCQERDDADELRMAVKEIICESDKE 528
           KK+E+ SV KVTGDGRC+FRALVKGMA NKG++L+  +ER+ ADELRMAVKE+ICE++ E
Sbjct: 68  KKVERLSVHKVTGDGRCLFRALVKGMAHNKGVALNQREERESADELRMAVKEVICENEGE 127

Query: 527 RRQYEEALVAITVDESLKRYCQRIERSDFWGGESELLVLSKLCHQPVIVYIPENEHTNAG 348
           R+ YEEAL+AITVDE L RYC+RI RSDFWGGESELLVLSKLC QPVIVYIPE+EH  +G
Sbjct: 128 RKLYEEALIAITVDEPLPRYCKRIVRSDFWGGESELLVLSKLCKQPVIVYIPEHEHRGSG 187

Query: 347 WGTGFIPIAEYGSEFXXXXXXXKPRKAVRLLYSGKNHYDLLV 222
            G+GFIPIAEYGSEF         RK VRLL+SGKNHYDLL+
Sbjct: 188 RGSGFIPIAEYGSEF----RKRSSRKVVRLLFSGKNHYDLLM 225


Top