BLASTX nr result
ID: Coptis24_contig00023209
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023209 (446 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indi... 65 8e-09 gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 65 8e-09 gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ... 64 1e-08 gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 64 2e-08 gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 64 2e-08 >gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indica Group] Length = 754 Score = 64.7 bits (156), Expect = 8e-09 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 2/147 (1%) Frame = -2 Query: 445 DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272 +AS WK + + EG IW IGNGK V + PWL ++ P+ R+ Sbjct: 576 NASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFSRRPI-------TRKGNC 628 Query: 271 NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92 LK +L++ WDE R++ +F + I + + +D + W ++G V+ Sbjct: 629 RLKWVSDLLSENGAWDETRVNQVFLPVDAETICSIRVSSR-QEDDFVAWHPDKHGKFSVR 687 Query: 91 TAYHRMAGNGDMEQSSSFNTNTVKAIW 11 +AY +ME SSS ++ K +W Sbjct: 688 SAYGLACNLVNMETSSSSSSAGCKRMW 714 >gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group] Length = 1784 Score = 64.7 bits (156), Expect = 8e-09 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 2/147 (1%) Frame = -2 Query: 445 DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272 +AS WK + + EG IW IGNGK V + PWL ++ P+ R+ Sbjct: 1606 NASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFSRRPI-------TRKGNC 1658 Query: 271 NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92 LK +L++ WDE R++ +F + I + + +D + W ++G V+ Sbjct: 1659 RLKWVSDLLSENGAWDETRVNQVFLPVDAETICSIRVSSR-QEDDFVAWHPDKHGKFSVR 1717 Query: 91 TAYHRMAGNGDMEQSSSFNTNTVKAIW 11 +AY +ME SSS ++ K +W Sbjct: 1718 SAYGLACNLVNMETSSSSSSAGCKRMW 1744 >gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group] gi|31433076|gb|AAP54636.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 791 Score = 63.9 bits (154), Expect = 1e-08 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%) Frame = -2 Query: 430 WKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQNLKVK 257 W+ + + +G IW +GNG + + PWL ++ P+ L+ V Sbjct: 318 WRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDHSRRPITGKANCRLKW------VS 371 Query: 256 DLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVKTAYHR 77 DL+ DGS WD +I F + ++I + I + ED I W +NG V++AY Sbjct: 372 DLITEDGS-WDVPKIHQYFHNLDAEVILNICISSR-SEEDFIAWHPDKNGMFSVRSAYRL 429 Query: 76 MAGNGDMEQSSSFNTNTVKAIWK 8 A ++E+SSS TN + W+ Sbjct: 430 AAQLVNIEESSSSGTNNINKAWE 452 >gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1557 Score = 63.5 bits (153), Expect = 2e-08 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%) Frame = -2 Query: 445 DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272 +AS W+ + + V +G IW IGNG+ V V PWL +++ P+ + ++ Sbjct: 1272 NASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNNCRIKW--- 1328 Query: 271 NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92 V DLML +G WD N+I+ +F +II ++ ED I W + G+ V+ Sbjct: 1329 ---VADLMLDNGM-WDANKINQIFLPVDVEIILKLRTSSR-DEEDFIAWHPDKLGNFSVR 1383 Query: 91 TAYHRMAGNGDMEQSSSFNTN-TVKAIWK 8 TAY R+A N E++SS +++ ++ W+ Sbjct: 1384 TAY-RLAENWAKEEASSSSSDVNIRKAWE 1411 >gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1585 Score = 63.5 bits (153), Expect = 2e-08 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%) Frame = -2 Query: 445 DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272 +AS W+ + + V +G IW IGNG+ V V PWL +++ P+ + ++ Sbjct: 1300 NASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNNCRIKW--- 1356 Query: 271 NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92 V DLML +G WD N+I+ +F +II ++ ED I W + G+ V+ Sbjct: 1357 ---VADLMLDNGM-WDANKINQIFLPVDVEIILKLRTSSR-DEEDFIAWHPDKLGNFSVR 1411 Query: 91 TAYHRMAGNGDMEQSSSFNTN-TVKAIWK 8 TAY R+A N E++SS +++ ++ W+ Sbjct: 1412 TAY-RLAENWAKEEASSSSSDVNIRKAWE 1439