BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023209
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indi...    65   8e-09
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...    65   8e-09
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ...    64   1e-08
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    64   2e-08
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    64   2e-08

>gb|EEC80386.1| hypothetical protein OsI_22511 [Oryza sativa Indica Group]
          Length = 754

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 445 DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272
           +AS  WK +      + EG IW IGNGK V +   PWL    ++ P+        R+   
Sbjct: 576 NASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFSRRPI-------TRKGNC 628

Query: 271 NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92
            LK    +L++   WDE R++ +F     + I  + +      +D + W   ++G   V+
Sbjct: 629 RLKWVSDLLSENGAWDETRVNQVFLPVDAETICSIRVSSR-QEDDFVAWHPDKHGKFSVR 687

Query: 91  TAYHRMAGNGDMEQSSSFNTNTVKAIW 11
           +AY       +ME SSS ++   K +W
Sbjct: 688 SAYGLACNLVNMETSSSSSSAGCKRMW 714


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
 Frame = -2

Query: 445  DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272
            +AS  WK +      + EG IW IGNGK V +   PWL    ++ P+        R+   
Sbjct: 1606 NASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFSRRPI-------TRKGNC 1658

Query: 271  NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92
             LK    +L++   WDE R++ +F     + I  + +      +D + W   ++G   V+
Sbjct: 1659 RLKWVSDLLSENGAWDETRVNQVFLPVDAETICSIRVSSR-QEDDFVAWHPDKHGKFSVR 1717

Query: 91   TAYHRMAGNGDMEQSSSFNTNTVKAIW 11
            +AY       +ME SSS ++   K +W
Sbjct: 1718 SAYGLACNLVNMETSSSSSSAGCKRMW 1744


>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
           gi|31433076|gb|AAP54636.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 791

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
 Frame = -2

Query: 430 WKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQNLKVK 257
           W+ +      + +G IW +GNG  + +   PWL    ++ P+       L+       V 
Sbjct: 318 WRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDHSRRPITGKANCRLKW------VS 371

Query: 256 DLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVKTAYHR 77
           DL+  DGS WD  +I   F +   ++I  + I    + ED I W   +NG   V++AY  
Sbjct: 372 DLITEDGS-WDVPKIHQYFHNLDAEVILNICISSR-SEEDFIAWHPDKNGMFSVRSAYRL 429

Query: 76  MAGNGDMEQSSSFNTNTVKAIWK 8
            A   ++E+SSS  TN +   W+
Sbjct: 430 AAQLVNIEESSSSGTNNINKAWE 452


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
 Frame = -2

Query: 445  DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272
            +AS  W+ +    + V +G IW IGNG+ V V   PWL   +++ P+   +   ++    
Sbjct: 1272 NASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNNCRIKW--- 1328

Query: 271  NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92
               V DLML +G  WD N+I+ +F     +II ++        ED I W   + G+  V+
Sbjct: 1329 ---VADLMLDNGM-WDANKINQIFLPVDVEIILKLRTSSR-DEEDFIAWHPDKLGNFSVR 1383

Query: 91   TAYHRMAGNGDMEQSSSFNTN-TVKAIWK 8
            TAY R+A N   E++SS +++  ++  W+
Sbjct: 1384 TAY-RLAENWAKEEASSSSSDVNIRKAWE 1411


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
 Frame = -2

Query: 445  DASWFWKGVHRVGKRVLEGCIWSIGNGKDVLVMSQPWL--SINKHPVLINDMMPLRQDLQ 272
            +AS  W+ +    + V +G IW IGNG+ V V   PWL   +++ P+   +   ++    
Sbjct: 1300 NASPGWQAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLPRDLSRRPITPKNNCRIKW--- 1356

Query: 271  NLKVKDLMLTDGSGWDENRIDHLFPSTIGKIIKQVMIRPLVAGEDTIRWMDTRNGSLFVK 92
               V DLML +G  WD N+I+ +F     +II ++        ED I W   + G+  V+
Sbjct: 1357 ---VADLMLDNGM-WDANKINQIFLPVDVEIILKLRTSSR-DEEDFIAWHPDKLGNFSVR 1411

Query: 91   TAYHRMAGNGDMEQSSSFNTN-TVKAIWK 8
            TAY R+A N   E++SS +++  ++  W+
Sbjct: 1412 TAY-RLAENWAKEEASSSSSDVNIRKAWE 1439