BLASTX nr result

ID: Coptis24_contig00023189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023189
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35803.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-contai...    68   9e-10
ref|XP_002516200.1| DNA binding protein, putative [Ricinus commu...    68   9e-10
gb|EEE69768.1| hypothetical protein OsJ_29479 [Oryza sativa Japo...    66   3e-09
ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816...    64   1e-08

>emb|CBI35803.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/54 (66%), Positives = 41/54 (75%)
 Frame = +3

Query: 3   LLVSGSVQTCFDDQQLENNIKNELLKKSQLVHALPIRGESNRSLSVPRTSSSIA 164
           LLVSGS QTCFDDQ LENNIK E+ ++SQLVHALP    +   LS PR S+SIA
Sbjct: 315 LLVSGSAQTCFDDQLLENNIKKEVTEQSQLVHALPYSEGNKPPLSEPRRSASIA 368


>ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-containing protein 4 [Vitis
           vinifera] gi|297738501|emb|CBI27746.3| unnamed protein
           product [Vitis vinifera]
          Length = 739

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = +3

Query: 3   LLVSGSVQTCFDDQQLENNIKNELLKKSQLVHALPIRGESNRSLSVPRTSSSIA 164
           LLVSGS QTC +DQ LE+ IKNEL++KSQLVHA+P   ES  S S PR S+SIA
Sbjct: 307 LLVSGSAQTCLNDQLLESYIKNELIEKSQLVHAVPSCEESKLSSSEPRRSASIA 360


>ref|XP_002516200.1| DNA binding protein, putative [Ricinus communis]
           gi|223544686|gb|EEF46202.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 749

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/53 (66%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   LLVSGSVQTCFDDQQLENNIKNELLKKSQLVHALPIRGESNRSLSVPRTSSSI 161
           LLVSGS Q CF+DQ LEN+IKNEL++ SQLVHALP   ES    S PR S+SI
Sbjct: 315 LLVSGSAQACFNDQLLENHIKNELIENSQLVHALPSSEESKLLTSEPRKSASI 367


>gb|EEE69768.1| hypothetical protein OsJ_29479 [Oryza sativa Japonica Group]
          Length = 765

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/54 (64%), Positives = 42/54 (77%)
 Frame = +3

Query: 3   LLVSGSVQTCFDDQQLENNIKNELLKKSQLVHALPIRGESNRSLSVPRTSSSIA 164
           LLVSGS QTCFDDQ LE++IK+E+++KSQLVHALP   +   S SVP TS S A
Sbjct: 312 LLVSGSAQTCFDDQLLESHIKDEIIEKSQLVHALP-NNDDKLSSSVPFTSMSTA 364


>ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816540 [Glycine max]
          Length = 782

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/55 (61%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
 Frame = +3

Query: 3   LLVSGSVQTCFDDQQLENNIKNELLKKSQLVHALPIRGESNR-SLSVPRTSSSIA 164
           LLVSGS QTCF+DQ LEN+IKNE+++KSQLVHA  +  E N+ ++  PR S+SIA
Sbjct: 314 LLVSGSAQTCFNDQLLENHIKNEIIEKSQLVHA-QLNNEGNKENICEPRRSASIA 367


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