BLASTX nr result

ID: Coptis24_contig00023182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023182
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253...    62   5e-08
ref|XP_002515298.1| conserved hypothetical protein [Ricinus comm...    62   6e-08

>ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253802 [Vitis vinifera]
          Length = 163

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/94 (43%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
 Frame = +2

Query: 8   LQAGKYYLMFPAKKVYSKVSETEMKLIDTACRKKGKTVGPKVFPTSGEEG-----EDSSK 172
           L  GK YLM P  +V+  VSE EM LI  A +K+ K  G      +G EG     E  S+
Sbjct: 69  LLEGKAYLMMPVSRVHCVVSEVEMALIAAASKKRSKKRGGSRVLPAGNEGTTENLEVQSR 128

Query: 173 LLGED--CDTG-FPNCKLGNCKQWRPMLEPIYEG 265
           +LG D   D G F   +LGN +QW P+LE I EG
Sbjct: 129 VLGSDGGGDVGFFGRHRLGNFRQWSPVLETISEG 162


>ref|XP_002515298.1| conserved hypothetical protein [Ricinus communis]
           gi|223545778|gb|EEF47282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
 Frame = +2

Query: 2   EELQAGKYYLMFPAKKVYSKVSETEMKLIDTACRKKG----KTVGPKVFPTSG-----EE 154
           +E+ A K YL  P  +V  K+SE+EM++I  A   +     K  G KV P        EE
Sbjct: 67  DEVLARKVYLSLPLCRVNRKISESEMRIIQCAVAVEKMSPKKKSGAKVLPAVAVEVKEEE 126

Query: 155 GEDSSKLLG--EDCDTGFPNCKLGNCKQWRPMLEPIYE 262
            E  S+++G  E+ DT F  C+L N ++W P+LEPI+E
Sbjct: 127 EEIESEVVGVLEEQDTDFSGCRLANYQRWTPVLEPIFE 164


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