BLASTX nr result

ID: Coptis24_contig00023162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023162
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512662.1| ATP binding protein, putative [Ricinus commu...   164   1e-38
ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   155   9e-36
ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   152   4e-35
ref|XP_003621621.1| LRR receptor-like serine/threonine-protein k...   151   1e-34
ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-ac...   142   5e-32

>ref|XP_002512662.1| ATP binding protein, putative [Ricinus communis]
            gi|223548623|gb|EEF50114.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1369

 Score =  164 bits (416), Expect = 1e-38
 Identities = 83/127 (65%), Positives = 104/127 (81%)
 Frame = -1

Query: 382  HINAQTPSSPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMNRTPILKG 203
            H++ Q PS P +  +F   L+RI+I V+LG +TGL  AIL A+++R ++RYMNRTPILKG
Sbjct: 1012 HLSTQPPS-PSRPSQFNTGLKRILISVILGVLTGLSGAILCAYLVRCLVRYMNRTPILKG 1070

Query: 202  PVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDNATQEMQN 23
            PVIFSPKIAS TLQ AL+++ QLLGSS NG YYRTVLDNGLT+AVKRL+PF++ + E QN
Sbjct: 1071 PVIFSPKIASKTLQSALASENQLLGSSSNGNYYRTVLDNGLTIAVKRLEPFESGSPERQN 1130

Query: 22   KSVKRRI 2
            KSVKRRI
Sbjct: 1131 KSVKRRI 1137


>ref|XP_003551803.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Glycine max]
          Length = 1231

 Score =  155 bits (391), Expect = 9e-36
 Identities = 76/134 (56%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
 Frame = -1

Query: 385  EHINAQTPS------SPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMN 224
            +H++++ PS      SPP    +K   ++I++ ++LG VTGL+++ LFA V+R V++Y+N
Sbjct: 866  KHVSSEPPSPSRSTPSPPSSSGYKDDPRKIILSMVLGAVTGLVSSALFALVVRCVVQYLN 925

Query: 223  RTPILKGPVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDN 44
            RTPILKGPVIFSPKIA  TLQ AL+ +  LLGSSPNGKYY+TVLDNGLT+AVKRL PF++
Sbjct: 926  RTPILKGPVIFSPKIAPMTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFES 985

Query: 43   ATQEMQNKSVKRRI 2
             + E + KSVKR+I
Sbjct: 986  NSPEAKRKSVKRQI 999


>ref|XP_003530481.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like [Glycine max]
          Length = 1228

 Score =  152 bits (385), Expect = 4e-35
 Identities = 74/134 (55%), Positives = 104/134 (77%), Gaps = 6/134 (4%)
 Frame = -1

Query: 385  EHINAQTPS------SPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMN 224
            +H++++ PS      + P    +K   ++I++ ++LG VTGL+ ++LFA V+R V++Y+N
Sbjct: 863  KHVSSEPPSPSRPSSAAPSSSGYKDDPRKIILSMVLGAVTGLVCSVLFALVVRCVVQYLN 922

Query: 223  RTPILKGPVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDN 44
            RTPILKGPVIFSPKIAS TLQ AL+ +  LLGSSPNGKYY+T+LDNGLT+AVKRL PF++
Sbjct: 923  RTPILKGPVIFSPKIASKTLQSALAKENHLLGSSPNGKYYKTMLDNGLTIAVKRLTPFES 982

Query: 43   ATQEMQNKSVKRRI 2
             + E + KSVKR+I
Sbjct: 983  NSPEAKRKSVKRQI 996


>ref|XP_003621621.1| LRR receptor-like serine/threonine-protein kinase FEI [Medicago
           truncatula] gi|355496636|gb|AES77839.1| LRR
           receptor-like serine/threonine-protein kinase FEI
           [Medicago truncatula]
          Length = 356

 Score =  151 bits (381), Expect = 1e-34
 Identities = 72/113 (63%), Positives = 95/113 (84%)
 Frame = -1

Query: 340 EFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVIRYMNRTPILKGPVIFSPKIASTTLQ 161
           E+K   ++I+I ++LG VTGL+ ++LFAFVIR V+ Y+NRTPILKGPVIFSPKIAS TLQ
Sbjct: 11  EYKDDPRKIIISIVLGAVTGLIGSVLFAFVIRCVVWYLNRTPILKGPVIFSPKIASKTLQ 70

Query: 160 LALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLDPFDNATQEMQNKSVKRRI 2
           +AL+ +  +LGSSPNGKYY+TVL+NGL +AVKRL PF++ + E + KSVKR+I
Sbjct: 71  VALTKENHMLGSSPNGKYYKTVLENGLIIAVKRLTPFESNSPESRKKSVKRQI 123


>ref|XP_004167355.1| PREDICTED: ADP-ribosylation factor GTPase-activating protein
            AGD3-like, partial [Cucumis sativus]
          Length = 1194

 Score =  142 bits (359), Expect = 5e-32
 Identities = 71/138 (51%), Positives = 98/138 (71%)
 Frame = -1

Query: 415  YPSYGQPIPDEHINAQTPSSPPKIPEFKFQLQRIVIGVLLGCVTGLLAAILFAFVIRFVI 236
            + S G P+P       T S+P   P+FK  ++RI+  VLLG VTGL+ + LFA +IR  +
Sbjct: 834  FASSGPPLPT------TSSTPTSSPQFKNGVRRIIFSVLLGVVTGLMGSFLFACLIRSFV 887

Query: 235  RYMNRTPILKGPVIFSPKIASTTLQLALSNQTQLLGSSPNGKYYRTVLDNGLTVAVKRLD 56
            RY+N+TPILKGPVIFSP I   TL LAL N+ QLLGS+P+GKYYRT+LDNGLT+AVKRL+
Sbjct: 888  RYLNKTPILKGPVIFSPIIDPKTLHLALRNENQLLGSNPHGKYYRTILDNGLTIAVKRLE 947

Query: 55   PFDNATQEMQNKSVKRRI 2
              +N  ++ + +  + ++
Sbjct: 948  GSENTARKSEKRQTQLQL 965


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