BLASTX nr result

ID: Coptis24_contig00023161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023161
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530733.1| DNA helicase, putative [Ricinus communis] gi...   185   4e-45
emb|CBI27790.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   183   1e-44
ref|XP_002327724.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]     177   1e-42

>ref|XP_002530733.1| DNA helicase, putative [Ricinus communis]
           gi|223529697|gb|EEF31639.1| DNA helicase, putative
           [Ricinus communis]
          Length = 718

 Score =  185 bits (469), Expect = 4e-45
 Identities = 97/161 (60%), Positives = 117/161 (72%)
 Frame = +2

Query: 2   EFILSNPANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQ 181
           EFILS+  +K+L             L DF QMVEYCEGS CRR+KILESFGEQVP SLC+
Sbjct: 368 EFILSSAGSKKLQSSSSQDGLSKKSLSDFKQMVEYCEGSGCRRKKILESFGEQVPVSLCK 427

Query: 182 KSCDVCRHPKLVAKYLEELTCASNLHKANSRSRIFVSSSGTAAEDQFTEFWNRDDEASLS 361
           K+CD CRHP LVAKYLEEL  A    +A   S+IF+SSS T    QF+EFWNRDDE S S
Sbjct: 428 KTCDACRHPNLVAKYLEELKTACTARRA-GLSQIFISSS-TEDRGQFSEFWNRDDEVSNS 485

Query: 362 EEDISGSDDEVEVVRNLARSKSSSRSGLDEKIKLLEQLEES 484
           EEDIS SDD  EVV++LARSK S +SG++E+++LL+  EE+
Sbjct: 486 EEDISDSDDGTEVVKSLARSKLSRKSGVNERMELLQHAEEN 526


>emb|CBI27790.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  183 bits (464), Expect = 1e-44
 Identities = 94/162 (58%), Positives = 115/162 (70%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   EFILSNPANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQ 181
           EFILSN  +K+L             L DF+ MVEYCEGS CRR+KILE+FGEQV  S+C+
Sbjct: 386 EFILSNAESKKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGEQVAASICR 445

Query: 182 KSCDVCRHPKLVAKYLEELTCASNLHKANSRSRIFVSSSGTAAE-DQFTEFWNRDDEASL 358
           KSCD C+HP LVAKYLEE   A  L + N  SRIF+SSS    + +Q TEFWNRDDE S 
Sbjct: 446 KSCDACKHPNLVAKYLEEFASACALRQNNVFSRIFISSSSDLVDKEQLTEFWNRDDEVSG 505

Query: 359 SEEDISGSDDEVEVVRNLARSKSSSRSGLDEKIKLLEQLEES 484
           SEEDIS SDD +EV +++AR K  S+SGL EKI+LL++ EE+
Sbjct: 506 SEEDISDSDDGIEVGKSMARPKLPSKSGLSEKIELLQRAEEN 547


>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
           vinifera]
          Length = 730

 Score =  183 bits (464), Expect = 1e-44
 Identities = 94/162 (58%), Positives = 115/162 (70%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   EFILSNPANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQ 181
           EFILSN  +K+L             L DF+ MVEYCEGS CRR+KILE+FGEQV  S+C+
Sbjct: 369 EFILSNAESKKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGEQVAASICR 428

Query: 182 KSCDVCRHPKLVAKYLEELTCASNLHKANSRSRIFVSSSGTAAE-DQFTEFWNRDDEASL 358
           KSCD C+HP LVAKYLEE   A  L + N  SRIF+SSS    + +Q TEFWNRDDE S 
Sbjct: 429 KSCDACKHPNLVAKYLEEFASACALRQNNVFSRIFISSSSDLVDKEQLTEFWNRDDEVSG 488

Query: 359 SEEDISGSDDEVEVVRNLARSKSSSRSGLDEKIKLLEQLEES 484
           SEEDIS SDD +EV +++AR K  S+SGL EKI+LL++ EE+
Sbjct: 489 SEEDISDSDDGIEVGKSMARPKLPSKSGLSEKIELLQRAEEN 530


>ref|XP_002327724.1| predicted protein [Populus trichocarpa] gi|222836809|gb|EEE75202.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  179 bits (454), Expect = 2e-43
 Identities = 94/167 (56%), Positives = 115/167 (68%), Gaps = 6/167 (3%)
 Frame = +2

Query: 2   EFILSNPANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQ 181
           EFIL N  NK+L             L DFN M+EYCEGS CRR+KILESFGEQV  +LC+
Sbjct: 43  EFILRNAENKKLQSSSSKGELSKKSLTDFNLMIEYCEGSGCRRKKILESFGEQVSATLCK 102

Query: 182 KSCDVCRHPKLVAKYLEELTCASNLHKANSRSRIFVSSSGT------AAEDQFTEFWNRD 343
           KSCD C+HP LVAKYLEELT  S   + N  SR+F+S S          ++QF+EFWNRD
Sbjct: 103 KSCDACKHPNLVAKYLEELT-TSIARQRNGFSRVFMSRSTDMIDEEFRIDEQFSEFWNRD 161

Query: 344 DEASLSEEDISGSDDEVEVVRNLARSKSSSRSGLDEKIKLLEQLEES 484
           DE   SEEDIS  DDE EVV++L RS+ S +SG+DEKI+LL++ EE+
Sbjct: 162 DEGKSSEEDISDFDDETEVVKSLPRSRLSRKSGVDEKIELLQRAEEN 208


>gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
          Length = 772

 Score =  177 bits (448), Expect = 1e-42
 Identities = 92/167 (55%), Positives = 115/167 (68%), Gaps = 6/167 (3%)
 Frame = +2

Query: 2   EFILSNPANKRLHPXXXXXXXXXXXLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQ 181
           EFIL N  NK+L             L DFN M+EYCEG+ CRR+KILESFGEQV  +LC+
Sbjct: 367 EFILRNAENKKLQSSSSGGELSKKSLTDFNLMIEYCEGAGCRRKKILESFGEQVSATLCK 426

Query: 182 KSCDVCRHPKLVAKYLEELTCASNLHKANSRSRIFVSSSGTAAEDQF------TEFWNRD 343
           KSCD C+HP LVAKYLEELT  S   + N  SR+F+S S    +++F      +EFWNRD
Sbjct: 427 KSCDACKHPNLVAKYLEELT-TSIARQRNGFSRVFMSRSTDMIDEEFRIDEQISEFWNRD 485

Query: 344 DEASLSEEDISGSDDEVEVVRNLARSKSSSRSGLDEKIKLLEQLEES 484
           DEA  SEEDIS  DDE E V++L RS+ S +SG+DEKI+LL++ EE+
Sbjct: 486 DEAKSSEEDISDFDDETEAVKSLPRSRLSRKSGVDEKIELLQRAEEN 532


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