BLASTX nr result
ID: Coptis24_contig00023148
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00023148 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801... 83 2e-14 emb|CBI26667.3| unnamed protein product [Vitis vinifera] 82 5e-14 ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250... 82 5e-14 ref|XP_002529444.1| RNA binding protein, putative [Ricinus commu... 80 1e-13 ref|XP_002298825.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 >ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801276 [Glycine max] Length = 908 Score = 83.2 bits (204), Expect = 2e-14 Identities = 44/84 (52%), Positives = 52/84 (61%) Frame = +2 Query: 8 MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRHXXXXXXXXXXXXXXXQL 187 M+LEVVGRH +LFDDD ++FVNS ALVEWNSL IDRYDVRH Sbjct: 1 MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDVRHLLSAPLPPRLKRRPPP- 59 Query: 188 AGEESQIDQIRYQDLPTTTDDDIQ 259 E +DQ RY DLP+++ DD Q Sbjct: 60 --PEPDLDQQRYLDLPSSSPDDEQ 81 >emb|CBI26667.3| unnamed protein product [Vitis vinifera] Length = 152 Score = 82.0 bits (201), Expect = 5e-14 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%) Frame = +2 Query: 8 MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRH------XXXXXXXXXXX 169 M+LEV+GRH LLFDDD+ S+FVNS +ALVEWNSLLIDRYDVRH Sbjct: 1 MDLEVLGRHALLFDDDANSAFVNSNDALVEWNSLLIDRYDVRHLLPTPLPPLKRRRHHSS 60 Query: 170 XXXXQLAGEESQIDQIRYQDLPTTTDD 250 +++ E ++DQ R+ DLP +D+ Sbjct: 61 ALPAEISQLELELDQERFLDLPPPSDE 87 >ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250252 [Vitis vinifera] Length = 845 Score = 82.0 bits (201), Expect = 5e-14 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%) Frame = +2 Query: 8 MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRH------XXXXXXXXXXX 169 M+LEV+GRH LLFDDD+ S+FVNS +ALVEWNSLLIDRYDVRH Sbjct: 1 MDLEVLGRHALLFDDDANSAFVNSNDALVEWNSLLIDRYDVRHLLPTPLPPLKRRRHHSS 60 Query: 170 XXXXQLAGEESQIDQIRYQDLPTTTDD 250 +++ E ++DQ R+ DLP +D+ Sbjct: 61 ALPAEISQLELELDQERFLDLPPPSDE 87 >ref|XP_002529444.1| RNA binding protein, putative [Ricinus communis] gi|223531060|gb|EEF32910.1| RNA binding protein, putative [Ricinus communis] Length = 915 Score = 80.5 bits (197), Expect = 1e-13 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 9/91 (9%) Frame = +2 Query: 8 MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRHXXXXXXXXXXXXXXXQL 187 M+LEV+GRH LLFDDD+ ++FVNS ALV+WNSL IDRYDVRH Sbjct: 1 MDLEVIGRHALLFDDDALAAFVNSPEALVDWNSLSIDRYDVRHLLSSPPPPRNRHHRRNQ 60 Query: 188 AGE---------ESQIDQIRYQDLPTTTDDD 253 ES +D RY DLP+T+DD+ Sbjct: 61 HRSPSHNLDDSLESDLDHERYLDLPSTSDDE 91 >ref|XP_002298825.1| predicted protein [Populus trichocarpa] gi|222846083|gb|EEE83630.1| predicted protein [Populus trichocarpa] Length = 82 Score = 79.7 bits (195), Expect = 2e-13 Identities = 41/75 (54%), Positives = 47/75 (62%) Frame = +2 Query: 8 MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRHXXXXXXXXXXXXXXXQL 187 M+LEV GRH LLFDDD+ +SFVNS +ALVEWNSL IDRYDVRH Sbjct: 1 MDLEVFGRHALLFDDDTMASFVNSTDALVEWNSLSIDRYDVRHLLSSPPPPRSRHRHKHY 60 Query: 188 AGEESQIDQIRYQDL 232 ES++D RY DL Sbjct: 61 DSLESELDHDRYLDL 75