BLASTX nr result

ID: Coptis24_contig00023148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023148
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801...    83   2e-14
emb|CBI26667.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250...    82   5e-14
ref|XP_002529444.1| RNA binding protein, putative [Ricinus commu...    80   1e-13
ref|XP_002298825.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801276 [Glycine max]
          Length = 908

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/84 (52%), Positives = 52/84 (61%)
 Frame = +2

Query: 8   MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRHXXXXXXXXXXXXXXXQL 187
           M+LEVVGRH +LFDDD  ++FVNS  ALVEWNSL IDRYDVRH                 
Sbjct: 1   MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDVRHLLSAPLPPRLKRRPPP- 59

Query: 188 AGEESQIDQIRYQDLPTTTDDDIQ 259
              E  +DQ RY DLP+++ DD Q
Sbjct: 60  --PEPDLDQQRYLDLPSSSPDDEQ 81


>emb|CBI26667.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
 Frame = +2

Query: 8   MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRH------XXXXXXXXXXX 169
           M+LEV+GRH LLFDDD+ S+FVNS +ALVEWNSLLIDRYDVRH                 
Sbjct: 1   MDLEVLGRHALLFDDDANSAFVNSNDALVEWNSLLIDRYDVRHLLPTPLPPLKRRRHHSS 60

Query: 170 XXXXQLAGEESQIDQIRYQDLPTTTDD 250
               +++  E ++DQ R+ DLP  +D+
Sbjct: 61  ALPAEISQLELELDQERFLDLPPPSDE 87


>ref|XP_002278970.1| PREDICTED: uncharacterized protein LOC100250252 [Vitis vinifera]
          Length = 845

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
 Frame = +2

Query: 8   MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRH------XXXXXXXXXXX 169
           M+LEV+GRH LLFDDD+ S+FVNS +ALVEWNSLLIDRYDVRH                 
Sbjct: 1   MDLEVLGRHALLFDDDANSAFVNSNDALVEWNSLLIDRYDVRHLLPTPLPPLKRRRHHSS 60

Query: 170 XXXXQLAGEESQIDQIRYQDLPTTTDD 250
               +++  E ++DQ R+ DLP  +D+
Sbjct: 61  ALPAEISQLELELDQERFLDLPPPSDE 87


>ref|XP_002529444.1| RNA binding protein, putative [Ricinus communis]
           gi|223531060|gb|EEF32910.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 915

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 9/91 (9%)
 Frame = +2

Query: 8   MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRHXXXXXXXXXXXXXXXQL 187
           M+LEV+GRH LLFDDD+ ++FVNS  ALV+WNSL IDRYDVRH                 
Sbjct: 1   MDLEVIGRHALLFDDDALAAFVNSPEALVDWNSLSIDRYDVRHLLSSPPPPRNRHHRRNQ 60

Query: 188 AGE---------ESQIDQIRYQDLPTTTDDD 253
                       ES +D  RY DLP+T+DD+
Sbjct: 61  HRSPSHNLDDSLESDLDHERYLDLPSTSDDE 91


>ref|XP_002298825.1| predicted protein [Populus trichocarpa] gi|222846083|gb|EEE83630.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/75 (54%), Positives = 47/75 (62%)
 Frame = +2

Query: 8   MELEVVGRHTLLFDDDSASSFVNSRNALVEWNSLLIDRYDVRHXXXXXXXXXXXXXXXQL 187
           M+LEV GRH LLFDDD+ +SFVNS +ALVEWNSL IDRYDVRH                 
Sbjct: 1   MDLEVFGRHALLFDDDTMASFVNSTDALVEWNSLSIDRYDVRHLLSSPPPPRSRHRHKHY 60

Query: 188 AGEESQIDQIRYQDL 232
              ES++D  RY DL
Sbjct: 61  DSLESELDHDRYLDL 75


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