BLASTX nr result

ID: Coptis24_contig00023146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023146
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514628.1| Protein COBRA precursor, putative [Ricinus c...   322   8e-86
dbj|BAM05576.1| COBRA-like protein [Eucalyptus pilularis] gi|383...   319   4e-85
ref|XP_002330107.1| predicted protein [Populus trichocarpa] gi|2...   318   6e-85
gb|ABK96050.1| unknown [Populus trichocarpa]                          318   6e-85
gb|ABD96834.1| hypothetical protein [Cleome spinosa]                  317   1e-84

>ref|XP_002514628.1| Protein COBRA precursor, putative [Ricinus communis]
           gi|223546232|gb|EEF47734.1| Protein COBRA precursor,
           putative [Ricinus communis]
          Length = 461

 Score =  322 bits (824), Expect = 8e-86
 Identities = 143/175 (81%), Positives = 159/175 (90%)
 Frame = +3

Query: 6   SDSKLLSRVGVNTPRKDNAPLLQFTRHMCPIRVHWHVKLNYKDYWRAKVAITNFNYRLNY 185
           SDSK   R G+NTP+KDN PLLQ T HMCP+RVHWHVK+NYKDYWRAKVA+TNFNYR+NY
Sbjct: 276 SDSKEAHRKGINTPKKDNTPLLQCTHHMCPVRVHWHVKVNYKDYWRAKVAVTNFNYRMNY 335

Query: 186 TQWTLVVQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFHGMKFYNDLLMEAGPTGNVQSE 365
           TQWTLVVQHPNLNNVTQVFSFDYKPLVPY+SINDTGMF+GMKFYNDLLMEAGP GN+QSE
Sbjct: 336 TQWTLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNIQSE 395

Query: 366 VLLQKDINTFTLKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSGYMDSLKFTVLA 530
           VLL+KD NTFTLKQGWAFPRKVYFNGDEC +PPPD+YP+LPNS Y + + F  +A
Sbjct: 396 VLLRKDRNTFTLKQGWAFPRKVYFNGDECKMPPPDAYPYLPNSAYRNPVTFLTVA 450


>dbj|BAM05576.1| COBRA-like protein [Eucalyptus pilularis]
           gi|383081845|dbj|BAM05577.1| COBRA-like protein
           [Eucalyptus pyrocarpa]
          Length = 430

 Score =  319 bits (818), Expect = 4e-85
 Identities = 146/176 (82%), Positives = 156/176 (88%)
 Frame = +3

Query: 6   SDSKLLSRVGVNTPRKDNAPLLQFTRHMCPIRVHWHVKLNYKDYWRAKVAITNFNYRLNY 185
           +DSK+LS  GVNTPRKDNAPLLQ T HMCP+RVHWHVKLNYKDYWR K+AITNFNYR+NY
Sbjct: 245 NDSKILSMAGVNTPRKDNAPLLQCTHHMCPVRVHWHVKLNYKDYWRVKIAITNFNYRMNY 304

Query: 186 TQWTLVVQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFHGMKFYNDLLMEAGPTGNVQSE 365
           T W+LVVQHPNLNNVTQVFSFDYKPLVPY+SINDTGMF G K+YNDLLMEAGP GNVQSE
Sbjct: 305 TLWSLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFFGTKYYNDLLMEAGPLGNVQSE 364

Query: 366 VLLQKDINTFTLKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSGYMDSLKFTVLAT 533
           VLLQKD NTFT KQGWAFPRKVYFNGDECMLPPPDSYPFLPNS     L  + L +
Sbjct: 365 VLLQKDKNTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSARRKLLPVSTLVS 420


>ref|XP_002330107.1| predicted protein [Populus trichocarpa] gi|222871241|gb|EEF08372.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  318 bits (816), Expect = 6e-85
 Identities = 143/176 (81%), Positives = 159/176 (90%)
 Frame = +3

Query: 3   KSDSKLLSRVGVNTPRKDNAPLLQFTRHMCPIRVHWHVKLNYKDYWRAKVAITNFNYRLN 182
           KS+SK   + G+NTP+KDN PLLQ T HMCPIRVHWHVK+NY+DYWRAKVA+TNFNYR+N
Sbjct: 267 KSNSKESHKKGINTPKKDNTPLLQCTHHMCPIRVHWHVKVNYRDYWRAKVAVTNFNYRMN 326

Query: 183 YTQWTLVVQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFHGMKFYNDLLMEAGPTGNVQS 362
           YT+WTLVVQHPNLNNVTQVFSFDYKPLVPY+SINDTGMF+GMKFYNDLLMEAGP GNVQS
Sbjct: 327 YTEWTLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQS 386

Query: 363 EVLLQKDINTFTLKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSGYMDSLKFTVLA 530
           EVLLQKD NTF+LKQGWAFPRKVYFNGDECMLPPPD+YP+LPNS Y +      +A
Sbjct: 387 EVLLQKDKNTFSLKQGWAFPRKVYFNGDECMLPPPDTYPYLPNSAYANPTSILSMA 442


>gb|ABK96050.1| unknown [Populus trichocarpa]
          Length = 453

 Score =  318 bits (816), Expect = 6e-85
 Identities = 143/176 (81%), Positives = 159/176 (90%)
 Frame = +3

Query: 3   KSDSKLLSRVGVNTPRKDNAPLLQFTRHMCPIRVHWHVKLNYKDYWRAKVAITNFNYRLN 182
           KS+SK   + G+NTP+KDN PLLQ T HMCPIRVHWHVK+NY+DYWRAKVA+TNFNYR+N
Sbjct: 267 KSNSKESHKKGINTPKKDNTPLLQCTHHMCPIRVHWHVKVNYRDYWRAKVAVTNFNYRMN 326

Query: 183 YTQWTLVVQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFHGMKFYNDLLMEAGPTGNVQS 362
           YT+WTLVVQHPNLNNVTQVFSFDYKPLVPY+SINDTGMF+GMKFYNDLLMEAGP GNVQS
Sbjct: 327 YTEWTLVVQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKFYNDLLMEAGPFGNVQS 386

Query: 363 EVLLQKDINTFTLKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSGYMDSLKFTVLA 530
           EVLLQKD NTF+LKQGWAFPRKVYFNGDECMLPPPD+YP+LPNS Y +      +A
Sbjct: 387 EVLLQKDKNTFSLKQGWAFPRKVYFNGDECMLPPPDTYPYLPNSAYANPTSILSMA 442


>gb|ABD96834.1| hypothetical protein [Cleome spinosa]
          Length = 440

 Score =  317 bits (813), Expect = 1e-84
 Identities = 140/166 (84%), Positives = 155/166 (93%)
 Frame = +3

Query: 3   KSDSKLLSRVGVNTPRKDNAPLLQFTRHMCPIRVHWHVKLNYKDYWRAKVAITNFNYRLN 182
           KSDSK+LS  G+NTPRKDNAPLLQ T HMCP+RVHWHVK+NYKDYWR K+A+TNFNYR+N
Sbjct: 252 KSDSKILSVKGINTPRKDNAPLLQCTHHMCPVRVHWHVKVNYKDYWRVKIAVTNFNYRMN 311

Query: 183 YTQWTLVVQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFHGMKFYNDLLMEAGPTGNVQS 362
           ++ WTL +QHPNLNNVTQVFSFDYKPLVPY+SINDTGMF+GMK+YNDLLMEAGP GNVQS
Sbjct: 312 FSLWTLAIQHPNLNNVTQVFSFDYKPLVPYESINDTGMFYGMKYYNDLLMEAGPFGNVQS 371

Query: 363 EVLLQKDINTFTLKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSGY 500
           EVLLQKD NTFT KQGWAFPRKVYFNGDECMLPPPD+YPFLPNS +
Sbjct: 372 EVLLQKDRNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNSAH 417


Top