BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023140
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    82   6e-14
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    75   7e-12
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    73   3e-11
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
 Frame = -3

Query: 352 MNSVHKCSSQFEEYM---IWAPDLKGEFSSKFAYEEIRVKKPIVSWIKFIWNCHIHPRPA 182
           +  +H+ +   +E +   IW   + G+ S+K A+  +    P V W K +WN +  P  A
Sbjct: 26  VEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTPPTGA 85

Query: 181 TLAWKIVKKGVATDDRVQKDGIPLVS-CCRMCNKSGETQKHLIWECSFAQQIWKWI 17
            + W+ +   + TDD ++K G  +VS CC  C K  ET  H+  +C    Q+W W+
Sbjct: 86  FITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWL 141


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 29/90 (32%), Positives = 53/90 (58%)
 Frame = -3

Query: 286 GEFSSKFAYEEIRVKKPIVSWIKFIWNCHIHPRPATLAWKIVKKGVATDDRVQKDGIPLV 107
           G+ +++ AY+ I      V W KF+WN +I P  + + W+++   + TD+ ++K G  +V
Sbjct: 16  GDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIV 75

Query: 106 SCCRMCNKSGETQKHLIWECSFAQQIWKWI 17
           S C  C KS E+ +H+ +EC    ++W W+
Sbjct: 76  SICCFCMKSAESSQHIFFECHVTSRLWDWL 105


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/106 (31%), Positives = 54/106 (50%)
 Frame = -3

Query: 319 EEYMIWAPDLKGEFSSKFAYEEIRVKKPIVSWIKFIWNCHIHPRPATLAWKIVKKGVATD 140
           E+ +IW  +  G+   + +Y          +W K IW+  I P  + L W+++   V TD
Sbjct: 81  EDKLIWNHNSNGDLMMRDSYAFKNQPVNTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTD 140

Query: 139 DRVQKDGIPLVSCCRMCNKSGETQKHLIWECSFAQQIWKWIRHIFN 2
           +++Q+ G  L S C +C    ET  HL +EC FA +IW W   + +
Sbjct: 141 EKLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAFRIWCWFASVLD 186


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/98 (30%), Positives = 55/98 (56%)
 Frame = -3

Query: 319  EEYMIWAPDLKGEFSSKFAYEEIRVKKPIVSWIKFIWNCHIHPRPATLAWKIVKKGVATD 140
            ++ +IW       FS K A+E++R  + +V W   +W  +  PR + L W +V++ + T 
Sbjct: 844  KDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQ 903

Query: 139  DRVQKDGIPLVSCCRMCNKSGETQKHLIWECSFAQQIW 26
            D++ + GI   + C +C ++ E   HL +ECS+ + IW
Sbjct: 904  DKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 941


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 29/98 (29%), Positives = 55/98 (56%)
 Frame = -3

Query: 319 EEYMIWAPDLKGEFSSKFAYEEIRVKKPIVSWIKFIWNCHIHPRPATLAWKIVKKGVATD 140
           ++ ++W       FS K A+E++R  + +V W   +W  +  PR + L W +V++ + T 
Sbjct: 129 KDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQ 188

Query: 139 DRVQKDGIPLVSCCRMCNKSGETQKHLIWECSFAQQIW 26
           D++ + GI   + C +C ++ E   HL +ECS+ + IW
Sbjct: 189 DKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 226