BLASTX nr result

ID: Coptis24_contig00023137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00023137
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B...   557   e-156
emb|CBI17381.3| unnamed protein product [Vitis vinifera]              557   e-156
ref|XP_002268226.1| PREDICTED: WD repeat-containing protein 82-B...   556   e-156
ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B...   556   e-156
emb|CAN80813.1| hypothetical protein VITISV_020464 [Vitis vinifera]   553   e-155

>ref|XP_004134865.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score =  557 bits (1435), Expect = e-156
 Identities = 271/331 (81%), Positives = 298/331 (90%)
 Frame = -2

Query: 1518 GGRESEIEEKVSFELTDEIIKSIEVGMDLIDHTGPISSMDFHKASGYLVTASDDESIRLY 1339
            GG +SE EEKVS ELT+EI++S+EVGM   D+ G ISSMDFHK S YLVTASDDESIRLY
Sbjct: 2    GGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHKTSSYLVTASDDESIRLY 61

Query: 1338 DVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 1159
            DV++A CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSL+DNKYLRYF+GHH
Sbjct: 62   DVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHH 121

Query: 1158 DRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFG 979
            DRVVSLS+C+RKECFISGSLDRTVLLWDQRAEKCQ LLRVQG+PA AYD+QG+VF IAFG
Sbjct: 122  DRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFG 181

Query: 978  GYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRGTLL 799
            GY+RMFDARKYEKGPFDIFSVG DLSDAN+VK+SNDGRLMLLTT+DG IHVLDSFRGTLL
Sbjct: 182  GYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLL 241

Query: 798  STYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXVYVWNIRSGKEVASWMSTELEPPVIKW 619
            STYNVKP+S N TLEASFSPEGMF         VY W++RSGKEVASWMSTE+EPPVIKW
Sbjct: 242  STYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKW 301

Query: 618  SPGCLMFATGSSELSFWVPDLSKLGSFVGAK 526
            +PG LMFATGSSELSFW+PDLSKLG++V  K
Sbjct: 302  APGSLMFATGSSELSFWIPDLSKLGAYVDRK 332


>emb|CBI17381.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  557 bits (1435), Expect = e-156
 Identities = 273/335 (81%), Positives = 296/335 (88%)
 Frame = -2

Query: 1530 EMMPGGRESEIEEKVSFELTDEIIKSIEVGMDLIDHTGPISSMDFHKASGYLVTASDDES 1351
            +M  G  +SE E+KV+ ELT+EI +S+EVGM   D++G ISSMDFH+ S YLVTASDDES
Sbjct: 188  QMAGGQGQSEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDES 247

Query: 1350 IRLYDVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 1171
            IRLYDV+   CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYF
Sbjct: 248  IRLYDVATGTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYF 307

Query: 1170 KGHHDRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFT 991
            KGHHDRVVSLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF 
Sbjct: 308  KGHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFA 367

Query: 990  IAFGGYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFR 811
            IAFGGYVR+FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSFR
Sbjct: 368  IAFGGYVRLFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFR 427

Query: 810  GTLLSTYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXVYVWNIRSGKEVASWMSTELEPP 631
            GTLLSTYNVKPVSS STLEASFSPEGMF         VY W++RSGKEVASWMSTE EPP
Sbjct: 428  GTLLSTYNVKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPP 487

Query: 630  VIKWSPGCLMFATGSSELSFWVPDLSKLGSFVGAK 526
            VIKW+PG LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 488  VIKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK 522


>ref|XP_002268226.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera]
          Length = 334

 Score =  556 bits (1434), Expect = e-156
 Identities = 274/334 (82%), Positives = 297/334 (88%), Gaps = 1/334 (0%)
 Frame = -2

Query: 1524 MPGGR-ESEIEEKVSFELTDEIIKSIEVGMDLIDHTGPISSMDFHKASGYLVTASDDESI 1348
            M GG+ +SE E+KV+ ELT+EI +S+EVGM   D++G ISSMDFH+ S YLVTASDDESI
Sbjct: 1    MAGGQGQSEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESI 60

Query: 1347 RLYDVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 1168
            RLYDV+   CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYFK
Sbjct: 61   RLYDVATGTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYFK 120

Query: 1167 GHHDRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTI 988
            GHHDRVVSLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF I
Sbjct: 121  GHHDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAI 180

Query: 987  AFGGYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRG 808
            AFGGYVR+FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSFRG
Sbjct: 181  AFGGYVRLFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFRG 240

Query: 807  TLLSTYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXVYVWNIRSGKEVASWMSTELEPPV 628
            TLLSTYNVKPVSS STLEASFSPEGMF         VY W++RSGKEVASWMSTE EPPV
Sbjct: 241  TLLSTYNVKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPPV 300

Query: 627  IKWSPGCLMFATGSSELSFWVPDLSKLGSFVGAK 526
            IKW+PG LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 301  IKWAPGSLMFVTGSSELSFWIPDLSKLGAYAGRK 334


>ref|XP_004158872.1| PREDICTED: WD repeat-containing protein 82-B-like [Cucumis sativus]
          Length = 332

 Score =  556 bits (1432), Expect = e-156
 Identities = 270/331 (81%), Positives = 298/331 (90%)
 Frame = -2

Query: 1518 GGRESEIEEKVSFELTDEIIKSIEVGMDLIDHTGPISSMDFHKASGYLVTASDDESIRLY 1339
            GG +SE EEKVS ELT+EI++S+EVGM   D+ G ISSMDFH+ S YLVTASDDESIRLY
Sbjct: 2    GGSQSEREEKVSLELTEEILQSMEVGMTFRDYNGRISSMDFHRTSSYLVTASDDESIRLY 61

Query: 1338 DVSNAMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHH 1159
            DV++A CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSL+DNKYLRYF+GHH
Sbjct: 62   DVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLNDNKYLRYFRGHH 121

Query: 1158 DRVVSLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFG 979
            DRVVSLS+C+RKECFISGSLDRTVLLWDQRAEKCQ LLRVQG+PA AYD+QG+VF IAFG
Sbjct: 122  DRVVSLSLCARKECFISGSLDRTVLLWDQRAEKCQGLLRVQGKPATAYDEQGVVFAIAFG 181

Query: 978  GYVRMFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRGTLL 799
            GY+RMFDARKYEKGPFDIFSVG DLSDAN+VK+SNDGRLMLLTT+DG IHVLDSFRGTLL
Sbjct: 182  GYIRMFDARKYEKGPFDIFSVGEDLSDANIVKFSNDGRLMLLTTSDGHIHVLDSFRGTLL 241

Query: 798  STYNVKPVSSNSTLEASFSPEGMFXXXXXXXXXVYVWNIRSGKEVASWMSTELEPPVIKW 619
            STYNVKP+S N TLEASFSPEGMF         VY W++RSGKEVASWMSTE+EPPVIKW
Sbjct: 242  STYNVKPISRNLTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTEMEPPVIKW 301

Query: 618  SPGCLMFATGSSELSFWVPDLSKLGSFVGAK 526
            +PG LMFATGSSELSFW+PDLSKLG++V  K
Sbjct: 302  APGSLMFATGSSELSFWIPDLSKLGAYVDRK 332


>emb|CAN80813.1| hypothetical protein VITISV_020464 [Vitis vinifera]
          Length = 328

 Score =  553 bits (1424), Expect = e-155
 Identities = 270/327 (82%), Positives = 292/327 (89%)
 Frame = -2

Query: 1506 SEIEEKVSFELTDEIIKSIEVGMDLIDHTGPISSMDFHKASGYLVTASDDESIRLYDVSN 1327
            +E E+KV+ ELT+EI +S+EVGM   D++G ISSMDFH+ S YLVTASDDESIRLYDV+ 
Sbjct: 2    AEREDKVALELTEEIFQSMEVGMAFRDYSGRISSMDFHRTSSYLVTASDDESIRLYDVAT 61

Query: 1326 AMCLKTINSKKYGVDLVSFTSQPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 1147
              CLKTINSKKYGVDLV FTS PTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV
Sbjct: 62   GTCLKTINSKKYGVDLVCFTSDPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGHHDRVV 121

Query: 1146 SLSMCSRKECFISGSLDRTVLLWDQRAEKCQSLLRVQGRPAVAYDDQGLVFTIAFGGYVR 967
            SLS+CSRKECFISGSLDRTVLLWDQRAEKCQ LLRVQGRPA AYDDQGLVF IAFGGYVR
Sbjct: 122  SLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAIAFGGYVR 181

Query: 966  MFDARKYEKGPFDIFSVGGDLSDANVVKYSNDGRLMLLTTTDGFIHVLDSFRGTLLSTYN 787
            +FDARKY+KGPF+IFSVGGD+SDANVVK+SNDGRLMLLTT DG IHVLDSFRGTLLSTYN
Sbjct: 182  LFDARKYDKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTMDGHIHVLDSFRGTLLSTYN 241

Query: 786  VKPVSSNSTLEASFSPEGMFXXXXXXXXXVYVWNIRSGKEVASWMSTELEPPVIKWSPGC 607
            VKPVSS STLEASFSPEGMF         VY W++RSGKEVASWMSTE EPPVIKW+PG 
Sbjct: 242  VKPVSSTSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSTETEPPVIKWAPGS 301

Query: 606  LMFATGSSELSFWVPDLSKLGSFVGAK 526
            LMF TGSSELSFW+PDLSKLG++ G K
Sbjct: 302  LMFVTGSSELSFWIPDLSKLGAYAGRK 328


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